RNA–Protein interactions for RNA: ENST00000293925.9

CRAMP1-201, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-201ENST00000293925 Q5W150 140 aa9.99□□□□□ -0.81
CRAMP1-201ENST00000293925 CFAP46Q8IYW2 2715 aa9.99□□□□□ -0.81
CRAMP1-201ENST00000293925 RPL37P61927 97 aaKnown RBP9.96□□□□□ -0.82
CRAMP1-201ENST00000293925 CFAP54Q96N23 3096 aa9.95□□□□□ -0.82
CRAMP1-201ENST00000293925 H1FX-AS1Q4G0G2 97 aa9.95□□□□□ -0.82
CRAMP1-201ENST00000293925 CENPEQ02224 2701 aa9.89□□□□□ -0.83
CRAMP1-201ENST00000293925 KRTAP16-1A8MUX0 517 aa9.87□□□□□ -0.83
CRAMP1-201ENST00000293925 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
CRAMP1-201ENST00000293925 STAB1Q9NY15 2570 aa9.85□□□□□ -0.83
CRAMP1-201ENST00000293925 M0QZ58 72 aa9.85□□□□□ -0.83
CRAMP1-201ENST00000293925 LAMA2P24043 3122 aaKnown RBP9.85□□□□□ -0.83
CRAMP1-201ENST00000293925 ITPR3Q14573 2671 aa9.84□□□□□ -0.83
CRAMP1-201ENST00000293925 FLNAP21333 2647 aaKnown RBP9.84□□□□□ -0.83
CRAMP1-201ENST00000293925 CHD6Q8TD26 2715 aa9.83□□□□□ -0.84
CRAMP1-201ENST00000293925 LINC00472Q9H8W2 130 aa9.83□□□□□ -0.84
CRAMP1-201ENST00000293925 OXTP01178 125 aa9.8□□□□□ -0.84
CRAMP1-201ENST00000293925 Q8NDZ9 215 aa9.79□□□□□ -0.84
CRAMP1-201ENST00000293925 NBEAL1Q6ZS30 2694 aa9.79□□□□□ -0.84
CRAMP1-201ENST00000293925 SPATA8Q6RVD6 105 aa9.78□□□□□ -0.84
CRAMP1-201ENST00000293925 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
CRAMP1-201ENST00000293925 PLAC4Q8WY50 150 aa9.75□□□□□ -0.85
CRAMP1-201ENST00000293925 SPRR1AP35321 89 aa9.74□□□□□ -0.85
CRAMP1-201ENST00000293925 TEX15Q9BXT5 2789 aa9.73□□□□□ -0.85
CRAMP1-201ENST00000293925 ADM2Q7Z4H4 148 aa9.72□□□□□ -0.85
CRAMP1-201ENST00000293925 SEC61BP60468 96 aaKnown RBP9.71□□□□□ -0.85
CRAMP1-201ENST00000293925 A0A0C4DFX4 3053 aa9.71□□□□□ -0.86
CRAMP1-201ENST00000293925 HELZ2Q9BYK8 2649 aaKnown RBP9.7□□□□□ -0.86
CRAMP1-201ENST00000293925 KRTAP26-1Q6PEX3 210 aa9.68□□□□□ -0.86
CRAMP1-201ENST00000293925 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
CRAMP1-201ENST00000293925 SPRR1BP22528 89 aa9.64□□□□□ -0.87
CRAMP1-201ENST00000293925 C20orf166-AS1Q96NR2 134 aa9.63□□□□□ -0.87
CRAMP1-201ENST00000293925 KRTAP1-3Q8IUG1 177 aa9.61□□□□□ -0.87
CRAMP1-201ENST00000293925 UNC79Q9P2D8 2635 aa9.59□□□□□ -0.87
CRAMP1-201ENST00000293925 FREM2Q5SZK8 3169 aa9.59□□□□□ -0.87
CRAMP1-201ENST00000293925 STAB2Q8WWQ8 2551 aa9.59□□□□□ -0.87
CRAMP1-201ENST00000293925 Q6ZR54 194 aa9.58□□□□□ -0.88
CRAMP1-201ENST00000293925 COL6A5A8TX70 2615 aa9.56□□□□□ -0.88
CRAMP1-201ENST00000293925 NOTCH1P46531 2555 aa9.56□□□□□ -0.88
CRAMP1-201ENST00000293925 KRTAP25-1Q3LHN0 102 aa9.56□□□□□ -0.88
CRAMP1-201ENST00000293925 XIRP2A4UGR9 3374 aa9.56□□□□□ -0.88
CRAMP1-201ENST00000293925 KRTAP1-1Q07627 177 aa9.55□□□□□ -0.88
CRAMP1-201ENST00000293925 NDUFAF8A1L188 74 aa9.54□□□□□ -0.88
CRAMP1-201ENST00000293925 Q5VSD8 79 aa9.52□□□□□ -0.89
CRAMP1-201ENST00000293925 PANO1I0J062 215 aa9.52□□□□□ -0.89
CRAMP1-201ENST00000293925 SETXQ7Z333 2677 aaKnown RBP9.49□□□□□ -0.89
CRAMP1-201ENST00000293925 A8MU10 97 aa9.47□□□□□ -0.89
CRAMP1-201ENST00000293925 BAHCC1Q9P281 2608 aa9.46□□□□□ -0.89
CRAMP1-201ENST00000293925 MAP1AP78559 2803 aaPredicted RBP9.46□□□□□ -0.89
CRAMP1-201ENST00000293925 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.89
CRAMP1-201ENST00000293925 TRIOO75962 3097 aa9.46□□□□□ -0.9
CRAMP1-201ENST00000293925 MKI67P46013 3256 aaKnown RBP9.44□□□□□ -0.9
CRAMP1-201ENST00000293925 A6NN06 94 aa9.44□□□□□ -0.9
CRAMP1-201ENST00000293925 KRTAP1-5Q9BYS1 174 aa9.43□□□□□ -0.9
CRAMP1-201ENST00000293925 CELSR3Q9NYQ7 3312 aa9.43□□□□□ -0.9
CRAMP1-201ENST00000293925 KRTAP29-1A8MX34 341 aaPredicted RBP9.41□□□□□ -0.9
CRAMP1-201ENST00000293925 KRTAP10-1P60331 282 aa9.41□□□□□ -0.9
CRAMP1-201ENST00000293925 GCN1Q92616 2671 aaKnown RBP9.39□□□□□ -0.91
CRAMP1-201ENST00000293925 MGAQ8IWI9 3026 aa9.39□□□□□ -0.91
CRAMP1-201ENST00000293925 REV3LO60673 3130 aa9.38□□□□□ -0.91
CRAMP1-201ENST00000293925 KRTAP10-2P60368 255 aa9.37□□□□□ -0.91
CRAMP1-201ENST00000293925 A8MUU9 505 aa9.36□□□□□ -0.91
CRAMP1-201ENST00000293925 A0A087X002 238 aa9.34□□□□□ -0.91
CRAMP1-201ENST00000293925 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
CRAMP1-201ENST00000293925 VPS13AQ96RL7 3174 aa9.33□□□□□ -0.92
CRAMP1-201ENST00000293925 C10orf95Q9H7T3 257 aa9.31□□□□□ -0.92
CRAMP1-201ENST00000293925 PRUNE2Q8WUY3 3088 aa9.3□□□□□ -0.92
CRAMP1-201ENST00000293925 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
CRAMP1-201ENST00000293925 WDFY4Q6ZS81 3184 aa9.28□□□□□ -0.92
CRAMP1-201ENST00000293925 FRYQ5TBA9 3013 aa9.27□□□□□ -0.93
CRAMP1-201ENST00000293925 UNC80Q8N2C7 3258 aa9.27□□□□□ -0.93
CRAMP1-201ENST00000293925 RANBP2P49792 3224 aaKnown RBP9.26□□□□□ -0.93
CRAMP1-201ENST00000293925 CHD7Q9P2D1 2997 aa9.24□□□□□ -0.93
CRAMP1-201ENST00000293925 NBEAL2Q6ZNJ1 2754 aa9.21□□□□□ -0.93
CRAMP1-201ENST00000293925 LAMA3Q16787 3333 aa9.2□□□□□ -0.94
CRAMP1-201ENST00000293925 ZNF292O60281 2723 aa9.19□□□□□ -0.94
CRAMP1-201ENST00000293925 TRANK1O15050 2925 aa9.19□□□□□ -0.94
CRAMP1-201ENST00000293925 TNP1P09430 55 aa9.18□□□□□ -0.94
CRAMP1-201ENST00000293925 ITPR2Q14571 2701 aa9.16□□□□□ -0.94
CRAMP1-201ENST00000293925 BRCA2P51587 3418 aa9.15□□□□□ -0.94
CRAMP1-201ENST00000293925 APCP25054 2843 aa9.14□□□□□ -0.95
CRAMP1-201ENST00000293925 LCE6AA0A183 80 aa9.14□□□□□ -0.95
CRAMP1-201ENST00000293925 DSPP15924 2871 aaKnown RBP9.09□□□□□ -0.95
CRAMP1-201ENST00000293925 KALRNO60229 2985 aa9.09□□□□□ -0.95
CRAMP1-201ENST00000293925 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.96
CRAMP1-201ENST00000293925 DMXL2Q8TDJ6 3036 aa9.08□□□□□ -0.96
CRAMP1-201ENST00000293925 CRYBG3Q68DQ2 2970 aa9.05□□□□□ -0.96
CRAMP1-201ENST00000293925 KMT2BQ9UMN6 2715 aaPredicted RBP9.04□□□□□ -0.96
CRAMP1-201ENST00000293925 NSD1Q96L73 2696 aaPredicted RBP9.04□□□□□ -0.96
CRAMP1-201ENST00000293925 ASH1LQ9NR48 2969 aaKnown RBP9.02□□□□□ -0.97
CRAMP1-201ENST00000293925 RPS29P62273 56 aaKnown RBP9□□□□□ -0.97
CRAMP1-201ENST00000293925 DNAH14Q0VDD8 3507 aa9□□□□□ -0.97
CRAMP1-201ENST00000293925 UTP20O75691 2785 aaKnown RBP8.99□□□□□ -0.97
CRAMP1-201ENST00000293925 HTTP42858 3142 aa8.99□□□□□ -0.97
CRAMP1-201ENST00000293925 FRYLO94915 3013 aa8.97□□□□□ -0.97
CRAMP1-201ENST00000293925 IGSF10Q6WRI0 2623 aa8.94□□□□□ -0.98
CRAMP1-201ENST00000293925 UBR5O95071 2799 aaPredicted RBP8.94□□□□□ -0.98
CRAMP1-201ENST00000293925 COL12A1Q99715 3063 aa8.91□□□□□ -0.98
CRAMP1-201ENST00000293925 KRTAP13-2Q52LG2 175 aa8.89□□□□□ -0.99
CRAMP1-201ENST00000293925 CDH23Q9H251 3354 aa8.88□□□□□ -0.99
CRAMP1-201ENST00000293925 CFAP47Q6ZTR5 3102 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms