RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 FAM218AQ96MZ4 157 aa15.43■□□□□ 0.06
SSU72-201ENST00000291386 M0R143 59 aa15.42■□□□□ 0.06
SSU72-201ENST00000291386 OCIAD2Q56VL3 154 aa15.39■□□□□ 0.05
SSU72-201ENST00000291386 PSMB2P49721 201 aa15.37■□□□□ 0.05
SSU72-201ENST00000291386 PRR4Q16378 134 aa15.37■□□□□ 0.05
SSU72-201ENST00000291386 COX6CP09669 75 aa15.36■□□□□ 0.05
SSU72-201ENST00000291386 RETNLBQ9BQ08 111 aa15.33■□□□□ 0.04
SSU72-201ENST00000291386 F8WEM9 126 aa15.32■□□□□ 0.04
SSU72-201ENST00000291386 CD164Q04900 197 aa15.32■□□□□ 0.04
SSU72-201ENST00000291386 CLEC2BQ92478 149 aa15.31■□□□□ 0.04
SSU72-201ENST00000291386 LRP2P98164 4655 aa15.3■□□□□ 0.04
SSU72-201ENST00000291386 IGLV8-61A0A075B6I0 122 aa15.3■□□□□ 0.04
SSU72-201ENST00000291386 GHRHP01286 108 aa15.29■□□□□ 0.04
SSU72-201ENST00000291386 SNHG12Q9BXW3 62 aa15.28■□□□□ 0.04
SSU72-201ENST00000291386 Q6JHZ5 121 aa15.25■□□□□ 0.03
SSU72-201ENST00000291386 FP248Q71RG6 208 aaPredicted RBP15.25■□□□□ 0.03
SSU72-201ENST00000291386 HRCT1Q6UXD1 115 aa15.24■□□□□ 0.03
SSU72-201ENST00000291386 LPAP08519 4548 aa15.24■□□□□ 0.03
SSU72-201ENST00000291386 LIMD2Q9BT23 127 aa15.23■□□□□ 0.03
SSU72-201ENST00000291386 DNAL4O96015 105 aa15.22■□□□□ 0.03
SSU72-201ENST00000291386 SCGB1C2P0DMR2 95 aa15.22■□□□□ 0.03
SSU72-201ENST00000291386 IGLV7-46A0A075B6I9 117 aa15.2■□□□□ 0.02
SSU72-201ENST00000291386 A0A0G2JQZ4 141 aa15.2■□□□□ 0.02
SSU72-201ENST00000291386 H3BQ85 93 aa15.2■□□□□ 0.02
SSU72-201ENST00000291386 UBR4Q5T4S7 5183 aa15.19■□□□□ 0.02
SSU72-201ENST00000291386 Q5XG85 94 aa15.19■□□□□ 0.02
SSU72-201ENST00000291386 LST1O00453 97 aa15.18■□□□□ 0.02
SSU72-201ENST00000291386 TRACP01848 142 aa15.18■□□□□ 0.02
SSU72-201ENST00000291386 NDUFV3P56181 108 aaKnown RBP15.18■□□□□ 0.02
SSU72-201ENST00000291386 ORMDL1Q9P0S3 153 aa15.18■□□□□ 0.02
SSU72-201ENST00000291386 IGFL1Q6UW32 110 aa15.17■□□□□ 0.02
SSU72-201ENST00000291386 TPRXLQ17RH7 258 aa15.15■□□□□ 0.02
SSU72-201ENST00000291386 FABP2P12104 132 aa15.14■□□□□ 0.01
SSU72-201ENST00000291386 BATFQ16520 125 aa15.13■□□□□ 0.01
SSU72-201ENST00000291386 H3BUT2 72 aa15.11■□□□□ 0.01
SSU72-201ENST00000291386 TMEM256-PLSCR3K7ERE1 68 aa15.11■□□□□ 0.01
SSU72-201ENST00000291386 NAA38Q9BRA0 125 aaKnown RBP15.09■□□□□ 0.01
SSU72-201ENST00000291386 H3BMG7 143 aa15.08■□□□□ 0
SSU72-201ENST00000291386 TRBV7-7A0A0K0K1E9 115 aa15.06■□□□□ 0
SSU72-201ENST00000291386 UBE2V1Q13404 147 aa15.05■□□□□ -0
SSU72-201ENST00000291386 Q6Q795 121 aa15.05■□□□□ -0
SSU72-201ENST00000291386 TCL1BO95988 128 aa15.04■□□□□ -0
SSU72-201ENST00000291386 ATXN8Q156A1 80 aa15.03■□□□□ -0
SSU72-201ENST00000291386 LYRM7Q5U5X0 104 aa15.03■□□□□ -0
SSU72-201ENST00000291386 KRTAP13-3Q3SY46 172 aa15.02■□□□□ -0
SSU72-201ENST00000291386 ASB16-AS1Q495Z4 193 aa15□□□□□ -0.01
SSU72-201ENST00000291386 C9orf118A6NHY6 69 aa14.99□□□□□ -0.01
SSU72-201ENST00000291386 TAX1BP3O14907 124 aa14.99□□□□□ -0.01
SSU72-201ENST00000291386 C1orf195Q5TG92 126 aa14.99□□□□□ -0.01
SSU72-201ENST00000291386 TEN1Q86WV5 123 aa14.98□□□□□ -0.01
SSU72-201ENST00000291386 CDIP1Q9H305 208 aa14.98□□□□□ -0.01
SSU72-201ENST00000291386 TRBV20-1A0A075B6N2 111 aa14.97□□□□□ -0.01
SSU72-201ENST00000291386 BAALC-AS2P0C853 105 aa14.96□□□□□ -0.01
SSU72-201ENST00000291386 ANKRD29Q8N6D5 301 aa14.93□□□□□ -0.02
SSU72-201ENST00000291386 A0A1W2PNM2 257 aa14.9□□□□□ -0.02
SSU72-201ENST00000291386 A0A1W2PPM0 123 aa14.89□□□□□ -0.03
SSU72-201ENST00000291386 SS18L2Q9UHA2 77 aa14.88□□□□□ -0.03
SSU72-201ENST00000291386 A0A1B0GV72 72 aa14.86□□□□□ -0.03
SSU72-201ENST00000291386 RBM3P98179 157 aaKnown RBP14.86□□□□□ -0.03
SSU72-201ENST00000291386 RNF213Q63HN8 5207 aa14.85□□□□□ -0.03
SSU72-201ENST00000291386 TRBV7-4A0A0J9YYF1 115 aa14.85□□□□□ -0.03
SSU72-201ENST00000291386 COL5A1-AS1Q5SY13 56 aa14.84□□□□□ -0.03
SSU72-201ENST00000291386 A0A087WSZ3 146 aa14.83□□□□□ -0.04
SSU72-201ENST00000291386 MUC17Q685J3 4493 aa14.82□□□□□ -0.04
SSU72-201ENST00000291386 C9JAW5 83 aa14.8□□□□□ -0.04
SSU72-201ENST00000291386 DSCR8Q96T75 97 aa14.8□□□□□ -0.04
SSU72-201ENST00000291386 JMJD7-PLA2G4BH0Y9G9 81 aa14.79□□□□□ -0.04
SSU72-201ENST00000291386 CCKP06307 115 aa14.79□□□□□ -0.04
SSU72-201ENST00000291386 XP32Q5T750 250 aa14.77□□□□□ -0.05
SSU72-201ENST00000291386 PCP4L1A6NKN8 68 aa14.75□□□□□ -0.05
SSU72-201ENST00000291386 C9orf92A6NGG3 77 aa14.72□□□□□ -0.05
SSU72-201ENST00000291386 H3BT86 120 aa14.72□□□□□ -0.05
SSU72-201ENST00000291386 OBSCN-AS1Q96MR7 158 aa14.71□□□□□ -0.05
SSU72-201ENST00000291386 Q96NJ1 140 aa14.71□□□□□ -0.05
SSU72-201ENST00000291386 SPCS1Q9Y6A9 102 aa14.71□□□□□ -0.05
SSU72-201ENST00000291386 LOC110117498A0A087WWA1 95 aa14.68□□□□□ -0.06
SSU72-201ENST00000291386 PDE6GP18545 87 aa14.67□□□□□ -0.06
SSU72-201ENST00000291386 C21orf62-AS1Q17RA5 79 aa14.66□□□□□ -0.06
SSU72-201ENST00000291386 Q6ZQT0 140 aa14.66□□□□□ -0.06
SSU72-201ENST00000291386 VPS25Q9BRG1 176 aa14.66□□□□□ -0.06
SSU72-201ENST00000291386 SEC61BP60468 96 aaKnown RBP14.64□□□□□ -0.07
SSU72-201ENST00000291386 A0A1B0GW54 56 aa14.61□□□□□ -0.07
SSU72-201ENST00000291386 MTURNQ8N3F0 131 aa14.61□□□□□ -0.07
SSU72-201ENST00000291386 LINC00472Q9H8W2 130 aa14.6□□□□□ -0.07
SSU72-201ENST00000291386 C14orf132Q9NPU4 83 aa14.6□□□□□ -0.07
SSU72-201ENST00000291386 K7EP34 96 aa14.58□□□□□ -0.08
SSU72-201ENST00000291386 MUC2Q02817 5179 aa14.57□□□□□ -0.08
SSU72-201ENST00000291386 IGKV4-1P06312 121 aa14.52□□□□□ -0.09
SSU72-201ENST00000291386 SMCPP49901 116 aaPredicted RBP14.51□□□□□ -0.09
SSU72-201ENST00000291386 SIGMAR1Q99720 223 aa14.51□□□□□ -0.09
SSU72-201ENST00000291386 PRO0461Q9UI25 63 aa14.5□□□□□ -0.09
SSU72-201ENST00000291386 RPL37P61927 97 aaKnown RBP14.49□□□□□ -0.09
SSU72-201ENST00000291386 DEFB116Q30KQ4 102 aa14.47□□□□□ -0.09
SSU72-201ENST00000291386 GTF2H5Q6ZYL4 71 aa14.46□□□□□ -0.09
SSU72-201ENST00000291386 J3KT08 172 aa14.42□□□□□ -0.1
SSU72-201ENST00000291386 PCOTHQ58A44 107 aa14.42□□□□□ -0.1
SSU72-201ENST00000291386 Q75L30 129 aa14.4□□□□□ -0.1
SSU72-201ENST00000291386 KRTAP4-1Q9BYQ7 146 aa14.4□□□□□ -0.1
SSU72-201ENST00000291386 DSCR10P59022 87 aa14.37□□□□□ -0.11
SSU72-201ENST00000291386 LINC00313P59037 77 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms