RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 KRTAP10-3P60369 221 aa8.11□□□□□ -1.11
SMARCA5-201ENST00000283131 ADM2Q7Z4H4 148 aa8.11□□□□□ -1.11
SMARCA5-201ENST00000283131 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
SMARCA5-201ENST00000283131 PRRC2CQ9Y520 2896 aaKnown RBP8.1□□□□□ -1.11
SMARCA5-201ENST00000283131 AKAP13Q12802 2813 aa8.09□□□□□ -1.11
SMARCA5-201ENST00000283131 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
SMARCA5-201ENST00000283131 NBEAL1Q6ZS30 2694 aa8.06□□□□□ -1.12
SMARCA5-201ENST00000283131 STAB2Q8WWQ8 2551 aa8.06□□□□□ -1.12
SMARCA5-201ENST00000283131 Q8NDZ9 215 aa8.03□□□□□ -1.12
SMARCA5-201ENST00000283131 FLNBO75369 2602 aaKnown RBP8.03□□□□□ -1.12
SMARCA5-201ENST00000283131 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
SMARCA5-201ENST00000283131 Q5XG85 94 aa8□□□□□ -1.13
SMARCA5-201ENST00000283131 OXTP01178 125 aa7.99□□□□□ -1.13
SMARCA5-201ENST00000283131 SPATA8Q6RVD6 105 aa7.98□□□□□ -1.13
SMARCA5-201ENST00000283131 LINC00472Q9H8W2 130 aa7.97□□□□□ -1.13
SMARCA5-201ENST00000283131 PCNTO95613 3336 aa7.95□□□□□ -1.14
SMARCA5-201ENST00000283131 ITPR3Q14573 2671 aa7.93□□□□□ -1.14
SMARCA5-201ENST00000283131 PANO1I0J062 215 aa7.93□□□□□ -1.14
SMARCA5-201ENST00000283131 DNAH12Q6ZR08 3092 aa7.91□□□□□ -1.14
SMARCA5-201ENST00000283131 A0A096LNT2 108 aa7.9□□□□□ -1.14
SMARCA5-201ENST00000283131 CEP350Q5VT06 3117 aa7.9□□□□□ -1.14
SMARCA5-201ENST00000283131 CENPEQ02224 2701 aa7.89□□□□□ -1.15
SMARCA5-201ENST00000283131 SPRR1AP35321 89 aa7.88□□□□□ -1.15
SMARCA5-201ENST00000283131 SPRR1BP22528 89 aa7.87□□□□□ -1.15
SMARCA5-201ENST00000283131 A8MUU9 505 aa7.84□□□□□ -1.15
SMARCA5-201ENST00000283131 Q6ZR54 194 aa7.84□□□□□ -1.15
SMARCA5-201ENST00000283131 FLNAP21333 2647 aaKnown RBP7.84□□□□□ -1.15
SMARCA5-201ENST00000283131 KRTAP26-1Q6PEX3 210 aa7.83□□□□□ -1.16
SMARCA5-201ENST00000283131 NDUFAF8A1L188 74 aa7.82□□□□□ -1.16
SMARCA5-201ENST00000283131 KRTAP25-1Q3LHN0 102 aa7.81□□□□□ -1.16
SMARCA5-201ENST00000283131 TNP1P09430 55 aa7.8□□□□□ -1.16
SMARCA5-201ENST00000283131 C10orf95Q9H7T3 257 aa7.79□□□□□ -1.16
SMARCA5-201ENST00000283131 C5orf42Q9H799 3197 aa7.78□□□□□ -1.16
SMARCA5-201ENST00000283131 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
SMARCA5-201ENST00000283131 LCE6AA0A183 80 aa7.74□□□□□ -1.17
SMARCA5-201ENST00000283131 KRTAP10-1P60331 282 aa7.74□□□□□ -1.17
SMARCA5-201ENST00000283131 CHD6Q8TD26 2715 aa7.73□□□□□ -1.17
SMARCA5-201ENST00000283131 UNC79Q9P2D8 2635 aa7.72□□□□□ -1.17
SMARCA5-201ENST00000283131 HELZ2Q9BYK8 2649 aaKnown RBP7.71□□□□□ -1.17
SMARCA5-201ENST00000283131 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.18
SMARCA5-201ENST00000283131 BAHCC1Q9P281 2608 aa7.7□□□□□ -1.18
SMARCA5-201ENST00000283131 TEX15Q9BXT5 2789 aa7.7□□□□□ -1.18
SMARCA5-201ENST00000283131 NOTCH1P46531 2555 aa7.69□□□□□ -1.18
SMARCA5-201ENST00000283131 KRTAP1-1Q07627 177 aa7.68□□□□□ -1.18
SMARCA5-201ENST00000283131 A8MU10 97 aa7.66□□□□□ -1.18
SMARCA5-201ENST00000283131 KRTAP10-2P60368 255 aa7.66□□□□□ -1.18
SMARCA5-201ENST00000283131 COL6A5A8TX70 2615 aa7.66□□□□□ -1.18
SMARCA5-201ENST00000283131 XIRP2A4UGR9 3374 aa7.62□□□□□ -1.19
SMARCA5-201ENST00000283131 KRTAP1-5Q9BYS1 174 aa7.58□□□□□ -1.2
SMARCA5-201ENST00000283131 A0A087X002 238 aa7.57□□□□□ -1.2
SMARCA5-201ENST00000283131 SETXQ7Z333 2677 aaKnown RBP7.57□□□□□ -1.2
SMARCA5-201ENST00000283131 P0C880 135 aa7.57□□□□□ -1.2
SMARCA5-201ENST00000283131 TEP1Q99973 2627 aaKnown RBP7.56□□□□□ -1.2
SMARCA5-201ENST00000283131 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
SMARCA5-201ENST00000283131 KRTAP29-1A8MX34 341 aaPredicted RBP7.53□□□□□ -1.2
SMARCA5-201ENST00000283131 A6NN06 94 aa7.53□□□□□ -1.2
SMARCA5-201ENST00000283131 PP632Q6XCG6 107 aa7.53□□□□□ -1.2
SMARCA5-201ENST00000283131 IGSF10Q6WRI0 2623 aa7.52□□□□□ -1.2
SMARCA5-201ENST00000283131 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
SMARCA5-201ENST00000283131 LAMA2P24043 3122 aaKnown RBP7.49□□□□□ -1.21
SMARCA5-201ENST00000283131 NOTCH2NLQ7Z3S9 236 aa7.47□□□□□ -1.21
SMARCA5-201ENST00000283131 NSD1Q96L73 2696 aaPredicted RBP7.46□□□□□ -1.21
SMARCA5-201ENST00000283131 PRUNE2Q8WUY3 3088 aa7.42□□□□□ -1.22
SMARCA5-201ENST00000283131 MKI67P46013 3256 aaKnown RBP7.42□□□□□ -1.22
SMARCA5-201ENST00000283131 KRTAP4-16G5E9R7 235 aaPredicted RBP7.41□□□□□ -1.22
SMARCA5-201ENST00000283131 A0A0C4DFX4 3053 aa7.41□□□□□ -1.22
SMARCA5-201ENST00000283131 KRTAP11-1Q8IUC1 163 aa7.41□□□□□ -1.22
SMARCA5-201ENST00000283131 CFAP54Q96N23 3096 aa7.4□□□□□ -1.22
SMARCA5-201ENST00000283131 GCN1Q92616 2671 aaKnown RBP7.4□□□□□ -1.23
SMARCA5-201ENST00000283131 PRO2289Q9P1D8 64 aa7.35□□□□□ -1.23
SMARCA5-201ENST00000283131 KMT2BQ9UMN6 2715 aaPredicted RBP7.31□□□□□ -1.24
SMARCA5-201ENST00000283131 Q6ZRN7 208 aaPredicted RBP7.29□□□□□ -1.24
SMARCA5-201ENST00000283131 LAMA3Q16787 3333 aa7.28□□□□□ -1.24
SMARCA5-201ENST00000283131 CELSR3Q9NYQ7 3312 aa7.28□□□□□ -1.24
SMARCA5-201ENST00000283131 BRCA2P51587 3418 aa7.24□□□□□ -1.25
SMARCA5-201ENST00000283131 TRIOO75962 3097 aa7.23□□□□□ -1.25
SMARCA5-201ENST00000283131 ITPR2Q14571 2701 aa7.23□□□□□ -1.25
SMARCA5-201ENST00000283131 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
SMARCA5-201ENST00000283131 APCP25054 2843 aa7.19□□□□□ -1.26
SMARCA5-201ENST00000283131 KRTAP13-2Q52LG2 175 aa7.18□□□□□ -1.26
SMARCA5-201ENST00000283131 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
SMARCA5-201ENST00000283131 ZNF292O60281 2723 aa7.15□□□□□ -1.26
SMARCA5-201ENST00000283131 VPS13AQ96RL7 3174 aa7.15□□□□□ -1.26
SMARCA5-201ENST00000283131 NBEAL2Q6ZNJ1 2754 aa7.15□□□□□ -1.26
SMARCA5-201ENST00000283131 MAP1AP78559 2803 aaPredicted RBP7.15□□□□□ -1.26
SMARCA5-201ENST00000283131 REV3LO60673 3130 aa7.15□□□□□ -1.27
SMARCA5-201ENST00000283131 RANBP2P49792 3224 aaKnown RBP7.11□□□□□ -1.27
SMARCA5-201ENST00000283131 MGAQ8IWI9 3026 aa7.1□□□□□ -1.27
SMARCA5-201ENST00000283131 CRYBG3Q68DQ2 2970 aa7.1□□□□□ -1.27
SMARCA5-201ENST00000283131 WDFY4Q6ZS81 3184 aa7.08□□□□□ -1.28
SMARCA5-201ENST00000283131 UTP20O75691 2785 aaKnown RBP7.06□□□□□ -1.28
SMARCA5-201ENST00000283131 UNC80Q8N2C7 3258 aa7.06□□□□□ -1.28
SMARCA5-201ENST00000283131 DNAH14Q0VDD8 3507 aa7.06□□□□□ -1.28
SMARCA5-201ENST00000283131 CDH23Q9H251 3354 aa7.05□□□□□ -1.28
SMARCA5-201ENST00000283131 UBR5O95071 2799 aaPredicted RBP7.05□□□□□ -1.28
SMARCA5-201ENST00000283131 FRYQ5TBA9 3013 aa7.04□□□□□ -1.28
SMARCA5-201ENST00000283131 KRTAP13-1Q8IUC0 172 aa7.01□□□□□ -1.29
SMARCA5-201ENST00000283131 FREM2Q5SZK8 3169 aa7.01□□□□□ -1.29
SMARCA5-201ENST00000283131 VCANP13611 3396 aa7□□□□□ -1.29
SMARCA5-201ENST00000283131 FRYLO94915 3013 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms