RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 K7EIL1 84 aa7.68□□□□□ -1.18
SRRM4-201ENST00000267260 KRTAP10-11P60412 298 aa7.68□□□□□ -1.18
SRRM4-201ENST00000267260 ASB16-AS1Q495Z4 193 aa7.67□□□□□ -1.18
SRRM4-201ENST00000267260 FP248Q71RG6 208 aaPredicted RBP7.66□□□□□ -1.18
SRRM4-201ENST00000267260 GIG44P09565 113 aaPredicted RBP7.66□□□□□ -1.18
SRRM4-201ENST00000267260 TNP2Q05952 138 aa7.65□□□□□ -1.18
SRRM4-201ENST00000267260 SMR3BP02814 79 aaPredicted RBP7.65□□□□□ -1.19
SRRM4-201ENST00000267260 TEP1Q99973 2627 aaKnown RBP7.65□□□□□ -1.19
SRRM4-201ENST00000267260 M0R2T5 61 aa7.63□□□□□ -1.19
SRRM4-201ENST00000267260 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.59□□□□□ -1.19
SRRM4-201ENST00000267260 R4GN34 69 aa7.59□□□□□ -1.19
SRRM4-201ENST00000267260 ZCCHC13Q8WW36 166 aaKnown RBP7.59□□□□□ -1.19
SRRM4-201ENST00000267260 RPL37P61927 97 aaKnown RBP7.59□□□□□ -1.2
SRRM4-201ENST00000267260 MAP1AP78559 2803 aaPredicted RBP7.56□□□□□ -1.2
SRRM4-201ENST00000267260 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
SRRM4-201ENST00000267260 SETXQ7Z333 2677 aaKnown RBP7.55□□□□□ -1.2
SRRM4-201ENST00000267260 MMP24-AS1A0A0U1RRL7 71 aa7.53□□□□□ -1.2
SRRM4-201ENST00000267260 ITPR2Q14571 2701 aa7.52□□□□□ -1.2
SRRM4-201ENST00000267260 C5orf42Q9H799 3197 aa7.52□□□□□ -1.21
SRRM4-201ENST00000267260 PCNTO95613 3336 aa7.51□□□□□ -1.21
SRRM4-201ENST00000267260 ZNF292O60281 2723 aa7.5□□□□□ -1.21
SRRM4-201ENST00000267260 Q5W150 140 aa7.5□□□□□ -1.21
SRRM4-201ENST00000267260 APCP25054 2843 aa7.48□□□□□ -1.21
SRRM4-201ENST00000267260 CYSTM1Q9H1C7 97 aa7.48□□□□□ -1.21
SRRM4-201ENST00000267260 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
SRRM4-201ENST00000267260 UTRNP46939 3433 aa7.44□□□□□ -1.22
SRRM4-201ENST00000267260 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
SRRM4-201ENST00000267260 CFAP54Q96N23 3096 aa7.44□□□□□ -1.22
SRRM4-201ENST00000267260 KRTAP10-3P60369 221 aa7.43□□□□□ -1.22
SRRM4-201ENST00000267260 NSD1Q96L73 2696 aaPredicted RBP7.43□□□□□ -1.22
SRRM4-201ENST00000267260 PLAC8Q9NZF1 115 aa7.42□□□□□ -1.22
SRRM4-201ENST00000267260 UTP20O75691 2785 aaKnown RBP7.42□□□□□ -1.22
SRRM4-201ENST00000267260 A0A096LNT2 108 aa7.42□□□□□ -1.22
SRRM4-201ENST00000267260 LINC00472Q9H8W2 130 aa7.4□□□□□ -1.22
SRRM4-201ENST00000267260 M0QZ58 72 aa7.39□□□□□ -1.23
SRRM4-201ENST00000267260 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
SRRM4-201ENST00000267260 SPRR1AP35321 89 aa7.39□□□□□ -1.23
SRRM4-201ENST00000267260 OXTP01178 125 aa7.34□□□□□ -1.23
SRRM4-201ENST00000267260 SPRR1BP22528 89 aa7.34□□□□□ -1.23
SRRM4-201ENST00000267260 IGSF10Q6WRI0 2623 aa7.34□□□□□ -1.23
SRRM4-201ENST00000267260 KRTAP25-1Q3LHN0 102 aa7.34□□□□□ -1.23
SRRM4-201ENST00000267260 Q6ZR54 194 aa7.32□□□□□ -1.24
SRRM4-201ENST00000267260 NBEAL2Q6ZNJ1 2754 aa7.32□□□□□ -1.24
SRRM4-201ENST00000267260 C20orf166-AS1Q96NR2 134 aa7.31□□□□□ -1.24
SRRM4-201ENST00000267260 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
SRRM4-201ENST00000267260 A0A0C4DFX4 3053 aa7.29□□□□□ -1.24
SRRM4-201ENST00000267260 ADM2Q7Z4H4 148 aa7.28□□□□□ -1.24
SRRM4-201ENST00000267260 ITPR1Q14643 2758 aa7.27□□□□□ -1.25
SRRM4-201ENST00000267260 NDUFAF8A1L188 74 aa7.27□□□□□ -1.25
SRRM4-201ENST00000267260 Q8NDZ9 215 aa7.26□□□□□ -1.25
SRRM4-201ENST00000267260 LAMA2P24043 3122 aaKnown RBP7.26□□□□□ -1.25
SRRM4-201ENST00000267260 A6NN06 94 aa7.25□□□□□ -1.25
SRRM4-201ENST00000267260 KRTAP26-1Q6PEX3 210 aa7.24□□□□□ -1.25
SRRM4-201ENST00000267260 UBR5O95071 2799 aaPredicted RBP7.22□□□□□ -1.25
SRRM4-201ENST00000267260 PANO1I0J062 215 aa7.21□□□□□ -1.25
SRRM4-201ENST00000267260 KRTAP1-3Q8IUG1 177 aa7.2□□□□□ -1.26
SRRM4-201ENST00000267260 TRANK1O15050 2925 aa7.19□□□□□ -1.26
SRRM4-201ENST00000267260 Q5VSD8 79 aa7.13□□□□□ -1.27
SRRM4-201ENST00000267260 MGAQ8IWI9 3026 aa7.13□□□□□ -1.27
SRRM4-201ENST00000267260 KRTAP1-1Q07627 177 aa7.12□□□□□ -1.27
SRRM4-201ENST00000267260 DSPP15924 2871 aaKnown RBP7.1□□□□□ -1.27
SRRM4-201ENST00000267260 A0A087X002 238 aa7.1□□□□□ -1.27
SRRM4-201ENST00000267260 FRYLO94915 3013 aa7.09□□□□□ -1.27
SRRM4-201ENST00000267260 REV3LO60673 3130 aa7.09□□□□□ -1.28
SRRM4-201ENST00000267260 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
SRRM4-201ENST00000267260 LRBAP50851 2863 aa7.07□□□□□ -1.28
SRRM4-201ENST00000267260 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
SRRM4-201ENST00000267260 FRYQ5TBA9 3013 aa7.05□□□□□ -1.28
SRRM4-201ENST00000267260 TRIOO75962 3097 aa7.05□□□□□ -1.28
SRRM4-201ENST00000267260 C10orf95Q9H7T3 257 aa7.04□□□□□ -1.28
SRRM4-201ENST00000267260 XIRP2A4UGR9 3374 aa7.04□□□□□ -1.28
SRRM4-201ENST00000267260 A8MUU9 505 aa7.03□□□□□ -1.28
SRRM4-201ENST00000267260 CHD7Q9P2D1 2997 aa7.03□□□□□ -1.28
SRRM4-201ENST00000267260 VPS13AQ96RL7 3174 aa7.02□□□□□ -1.29
SRRM4-201ENST00000267260 KRTAP4-16G5E9R7 235 aaPredicted RBP7.01□□□□□ -1.29
SRRM4-201ENST00000267260 A8MU10 97 aa7.01□□□□□ -1.29
SRRM4-201ENST00000267260 TNP1P09430 55 aa6.98□□□□□ -1.29
SRRM4-201ENST00000267260 ASH1LQ9NR48 2969 aaKnown RBP6.96□□□□□ -1.29
SRRM4-201ENST00000267260 FREM2Q5SZK8 3169 aa6.96□□□□□ -1.29
SRRM4-201ENST00000267260 CHD9Q3L8U1 2897 aa6.96□□□□□ -1.3
SRRM4-201ENST00000267260 KRTAP10-1P60331 282 aa6.95□□□□□ -1.3
SRRM4-201ENST00000267260 FLNCQ14315 2725 aa6.95□□□□□ -1.3
SRRM4-201ENST00000267260 WDFY4Q6ZS81 3184 aa6.95□□□□□ -1.3
SRRM4-201ENST00000267260 KALRNO60229 2985 aa6.95□□□□□ -1.3
SRRM4-201ENST00000267260 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
SRRM4-201ENST00000267260 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
SRRM4-201ENST00000267260 LCE6AA0A183 80 aa6.92□□□□□ -1.3
SRRM4-201ENST00000267260 MKI67P46013 3256 aaKnown RBP6.92□□□□□ -1.3
SRRM4-201ENST00000267260 KRTAP11-1Q8IUC1 163 aa6.91□□□□□ -1.3
SRRM4-201ENST00000267260 NF1P21359 2839 aa6.91□□□□□ -1.3
SRRM4-201ENST00000267260 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.3
SRRM4-201ENST00000267260 RANBP2P49792 3224 aaKnown RBP6.9□□□□□ -1.31
SRRM4-201ENST00000267260 CELSR3Q9NYQ7 3312 aa6.89□□□□□ -1.31
SRRM4-201ENST00000267260 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
SRRM4-201ENST00000267260 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
SRRM4-201ENST00000267260 TENM3Q9P273 2699 aa6.87□□□□□ -1.31
SRRM4-201ENST00000267260 HIVEP1P15822 2718 aa6.86□□□□□ -1.31
SRRM4-201ENST00000267260 PRUNE2Q8WUY3 3088 aa6.84□□□□□ -1.31
SRRM4-201ENST00000267260 COL12A1Q99715 3063 aa6.82□□□□□ -1.32
SRRM4-201ENST00000267260 DMXL2Q8TDJ6 3036 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms