RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 TEX15Q9BXT5 2789 aa8.16□□□□□ -1.1
TTC39A-202ENST00000262676 WDFY4Q6ZS81 3184 aa8.15□□□□□ -1.1
TTC39A-202ENST00000262676 SPINK7P58062 85 aa8.14□□□□□ -1.11
TTC39A-202ENST00000262676 CHD9Q3L8U1 2897 aa8.12□□□□□ -1.11
TTC39A-202ENST00000262676 UNC80Q8N2C7 3258 aa8.1□□□□□ -1.11
TTC39A-202ENST00000262676 LINC00612Q8N6U2 182 aa8.1□□□□□ -1.11
TTC39A-202ENST00000262676 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
TTC39A-202ENST00000262676 STAB1Q9NY15 2570 aa8.09□□□□□ -1.11
TTC39A-202ENST00000262676 CFAP54Q96N23 3096 aa8.09□□□□□ -1.11
TTC39A-202ENST00000262676 S4R3F8 94 aa8.08□□□□□ -1.12
TTC39A-202ENST00000262676 Q5XG85 94 aa8.08□□□□□ -1.12
TTC39A-202ENST00000262676 CDH23Q9H251 3354 aa8.08□□□□□ -1.12
TTC39A-202ENST00000262676 CNBPP62633 177 aaKnown RBP8.07□□□□□ -1.12
TTC39A-202ENST00000262676 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
TTC39A-202ENST00000262676 CR1P17927 2039 aa8.05□□□□□ -1.12
TTC39A-202ENST00000262676 Q8N9P0 234 aaPredicted RBP8.05□□□□□ -1.12
TTC39A-202ENST00000262676 LAMA2P24043 3122 aaKnown RBP8.04□□□□□ -1.12
TTC39A-202ENST00000262676 DSPP15924 2871 aaKnown RBP8.04□□□□□ -1.12
TTC39A-202ENST00000262676 COL6A5A8TX70 2615 aa8.03□□□□□ -1.12
TTC39A-202ENST00000262676 KLK9Q2XQG4 91 aa8.03□□□□□ -1.12
TTC39A-202ENST00000262676 Q5VV11 94 aa8.02□□□□□ -1.13
TTC39A-202ENST00000262676 FP248Q71RG6 208 aaPredicted RBP8□□□□□ -1.13
TTC39A-202ENST00000262676 AKAP13Q12802 2813 aa7.99□□□□□ -1.13
TTC39A-202ENST00000262676 TRIOO75962 3097 aa7.99□□□□□ -1.13
TTC39A-202ENST00000262676 SEC61BP60468 96 aaKnown RBP7.99□□□□□ -1.13
TTC39A-202ENST00000262676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
TTC39A-202ENST00000262676 ZNF292O60281 2723 aa7.98□□□□□ -1.13
TTC39A-202ENST00000262676 Q5VSD8 79 aa7.98□□□□□ -1.13
TTC39A-202ENST00000262676 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
TTC39A-202ENST00000262676 LCE6AA0A183 80 aa7.97□□□□□ -1.13
TTC39A-202ENST00000262676 CYSTM1Q9H1C7 97 aa7.97□□□□□ -1.13
TTC39A-202ENST00000262676 R4GN34 69 aa7.96□□□□□ -1.14
TTC39A-202ENST00000262676 REV3LO60673 3130 aa7.96□□□□□ -1.14
TTC39A-202ENST00000262676 SZT2Q5T011 3432 aa7.95□□□□□ -1.14
TTC39A-202ENST00000262676 ROMO1P60602 79 aa7.95□□□□□ -1.14
TTC39A-202ENST00000262676 MMP24-AS1A0A0U1RRL7 71 aa7.95□□□□□ -1.14
TTC39A-202ENST00000262676 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
TTC39A-202ENST00000262676 PLAC4Q8WY50 150 aa7.93□□□□□ -1.14
TTC39A-202ENST00000262676 CHD6Q8TD26 2715 aa7.92□□□□□ -1.14
TTC39A-202ENST00000262676 Q5W150 140 aa7.92□□□□□ -1.14
TTC39A-202ENST00000262676 GCN1Q92616 2671 aaKnown RBP7.9□□□□□ -1.14
TTC39A-202ENST00000262676 CELSR3Q9NYQ7 3312 aa7.89□□□□□ -1.15
TTC39A-202ENST00000262676 IGSF10Q6WRI0 2623 aa7.89□□□□□ -1.15
TTC39A-202ENST00000262676 FRYQ5TBA9 3013 aa7.88□□□□□ -1.15
TTC39A-202ENST00000262676 VPS13AQ96RL7 3174 aa7.88□□□□□ -1.15
TTC39A-202ENST00000262676 MAP1AP78559 2803 aaPredicted RBP7.87□□□□□ -1.15
TTC39A-202ENST00000262676 TRANK1O15050 2925 aa7.87□□□□□ -1.15
TTC39A-202ENST00000262676 RPL37P61927 97 aaKnown RBP7.87□□□□□ -1.15
TTC39A-202ENST00000262676 NOTCH1P46531 2555 aa7.85□□□□□ -1.15
TTC39A-202ENST00000262676 NBEAL1Q6ZS30 2694 aa7.84□□□□□ -1.15
TTC39A-202ENST00000262676 KRTAP16-1A8MUX0 517 aa7.84□□□□□ -1.15
TTC39A-202ENST00000262676 COL6A3P12111 3177 aa7.84□□□□□ -1.15
TTC39A-202ENST00000262676 M0QZ58 72 aa7.83□□□□□ -1.16
TTC39A-202ENST00000262676 KRTAP10-2P60368 255 aa7.83□□□□□ -1.16
TTC39A-202ENST00000262676 UNC79Q9P2D8 2635 aa7.83□□□□□ -1.16
TTC39A-202ENST00000262676 KRTAP10-1P60331 282 aa7.8□□□□□ -1.16
TTC39A-202ENST00000262676 SPATA8Q6RVD6 105 aa7.8□□□□□ -1.16
TTC39A-202ENST00000262676 CRYBG3Q68DQ2 2970 aa7.78□□□□□ -1.16
TTC39A-202ENST00000262676 KRTAP1-5Q9BYS1 174 aa7.77□□□□□ -1.16
TTC39A-202ENST00000262676 OXTP01178 125 aa7.77□□□□□ -1.17
TTC39A-202ENST00000262676 VCANP13611 3396 aa7.76□□□□□ -1.17
TTC39A-202ENST00000262676 Q8NDZ9 215 aa7.75□□□□□ -1.17
TTC39A-202ENST00000262676 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
TTC39A-202ENST00000262676 LINC00472Q9H8W2 130 aa7.74□□□□□ -1.17
TTC39A-202ENST00000262676 PLAC8Q9NZF1 115 aa7.72□□□□□ -1.17
TTC39A-202ENST00000262676 UBR5O95071 2799 aaPredicted RBP7.7□□□□□ -1.18
TTC39A-202ENST00000262676 C20orf166-AS1Q96NR2 134 aa7.69□□□□□ -1.18
TTC39A-202ENST00000262676 FRYLO94915 3013 aa7.68□□□□□ -1.18
TTC39A-202ENST00000262676 KRTAP26-1Q6PEX3 210 aa7.68□□□□□ -1.18
TTC39A-202ENST00000262676 ITPR2Q14571 2701 aa7.67□□□□□ -1.18
TTC39A-202ENST00000262676 TACC2O95359 2948 aa7.66□□□□□ -1.18
TTC39A-202ENST00000262676 SPRR1AP35321 89 aa7.65□□□□□ -1.19
TTC39A-202ENST00000262676 STAB2Q8WWQ8 2551 aa7.64□□□□□ -1.19
TTC39A-202ENST00000262676 LAMA1P25391 3075 aa7.63□□□□□ -1.19
TTC39A-202ENST00000262676 FREM2Q5SZK8 3169 aa7.63□□□□□ -1.19
TTC39A-202ENST00000262676 DNAH14Q0VDD8 3507 aa7.63□□□□□ -1.19
TTC39A-202ENST00000262676 DMBT1Q9UGM3 2413 aaPredicted RBP7.61□□□□□ -1.19
TTC39A-202ENST00000262676 COL12A1Q99715 3063 aa7.61□□□□□ -1.19
TTC39A-202ENST00000262676 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
TTC39A-202ENST00000262676 Q6ZR54 194 aa7.6□□□□□ -1.19
TTC39A-202ENST00000262676 ASB16-AS1Q495Z4 193 aa7.59□□□□□ -1.19
TTC39A-202ENST00000262676 NDUFAF8A1L188 74 aa7.59□□□□□ -1.19
TTC39A-202ENST00000262676 ATMQ13315 3056 aa7.59□□□□□ -1.19
TTC39A-202ENST00000262676 SPRR1BP22528 89 aa7.58□□□□□ -1.2
TTC39A-202ENST00000262676 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
TTC39A-202ENST00000262676 NBEAL2Q6ZNJ1 2754 aa7.56□□□□□ -1.2
TTC39A-202ENST00000262676 A8MU10 97 aa7.55□□□□□ -1.2
TTC39A-202ENST00000262676 CFAP47Q6ZTR5 3102 aa7.55□□□□□ -1.2
TTC39A-202ENST00000262676 DMXL2Q8TDJ6 3036 aa7.55□□□□□ -1.2
TTC39A-202ENST00000262676 BOD1L1Q8NFC6 3051 aa7.55□□□□□ -1.2
TTC39A-202ENST00000262676 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
TTC39A-202ENST00000262676 NSD1Q96L73 2696 aaPredicted RBP7.53□□□□□ -1.2
TTC39A-202ENST00000262676 PANO1I0J062 215 aa7.52□□□□□ -1.2
TTC39A-202ENST00000262676 ITPR1Q14643 2758 aa7.52□□□□□ -1.21
TTC39A-202ENST00000262676 SPEGQ15772 3267 aa7.51□□□□□ -1.21
TTC39A-202ENST00000262676 EYSQ5T1H1 3165 aa7.51□□□□□ -1.21
TTC39A-202ENST00000262676 TENM4Q6N022 2769 aa7.49□□□□□ -1.21
TTC39A-202ENST00000262676 A6NN06 94 aa7.49□□□□□ -1.21
TTC39A-202ENST00000262676 KRTAP21-3Q3LHN1 58 aa7.48□□□□□ -1.21
TTC39A-202ENST00000262676 SPTBN5Q9NRC6 3674 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms