RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 KRTAP10-11P60412 298 aa8.72□□□□□ -1.01
TARDBP-201ENST00000240185 TRIOO75962 3097 aa8.71□□□□□ -1.01
TARDBP-201ENST00000240185 K7EIL1 84 aa8.7□□□□□ -1.02
TARDBP-201ENST00000240185 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
TARDBP-201ENST00000240185 USP34Q70CQ2 3546 aa8.7□□□□□ -1.02
TARDBP-201ENST00000240185 MYO15AQ9UKN7 3530 aa8.69□□□□□ -1.02
TARDBP-201ENST00000240185 EPG5Q9HCE0 2579 aa8.69□□□□□ -1.02
TARDBP-201ENST00000240185 VCANP13611 3396 aa8.66□□□□□ -1.02
TARDBP-201ENST00000240185 SPEGQ15772 3267 aa8.66□□□□□ -1.02
TARDBP-201ENST00000240185 Q6ZSA8 131 aa8.66□□□□□ -1.02
TARDBP-201ENST00000240185 OXTP01178 125 aa8.65□□□□□ -1.02
TARDBP-201ENST00000240185 ATRQ13535 2644 aa8.64□□□□□ -1.03
TARDBP-201ENST00000240185 A0A0C4DFX4 3053 aa8.62□□□□□ -1.03
TARDBP-201ENST00000240185 LAMA1P25391 3075 aa8.6□□□□□ -1.03
TARDBP-201ENST00000240185 ZCCHC13Q8WW36 166 aaKnown RBP8.6□□□□□ -1.03
TARDBP-201ENST00000240185 Q5W150 140 aa8.58□□□□□ -1.04
TARDBP-201ENST00000240185 ROMO1P60602 79 aa8.58□□□□□ -1.04
TARDBP-201ENST00000240185 KRTAP10-3P60369 221 aa8.56□□□□□ -1.04
TARDBP-201ENST00000240185 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
TARDBP-201ENST00000240185 S4R3F8 94 aa8.54□□□□□ -1.04
TARDBP-201ENST00000240185 MAST4O15021 2626 aa8.53□□□□□ -1.04
TARDBP-201ENST00000240185 KRTAP16-1A8MUX0 517 aa8.53□□□□□ -1.04
TARDBP-201ENST00000240185 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
TARDBP-201ENST00000240185 R4GN34 69 aa8.52□□□□□ -1.05
TARDBP-201ENST00000240185 FLNBO75369 2602 aaKnown RBP8.52□□□□□ -1.05
TARDBP-201ENST00000240185 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
TARDBP-201ENST00000240185 Q8NDZ9 215 aa8.51□□□□□ -1.05
TARDBP-201ENST00000240185 SPRR1AP35321 89 aa8.48□□□□□ -1.05
TARDBP-201ENST00000240185 HECTD1Q9ULT8 2610 aa8.48□□□□□ -1.05
TARDBP-201ENST00000240185 ASB16-AS1Q495Z4 193 aa8.48□□□□□ -1.05
TARDBP-201ENST00000240185 VPS13AQ96RL7 3174 aa8.46□□□□□ -1.05
TARDBP-201ENST00000240185 M0R2T5 61 aa8.45□□□□□ -1.06
TARDBP-201ENST00000240185 TNP2Q05952 138 aa8.44□□□□□ -1.06
TARDBP-201ENST00000240185 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
TARDBP-201ENST00000240185 COL6A3P12111 3177 aa8.43□□□□□ -1.06
TARDBP-201ENST00000240185 SPRR1BP22528 89 aa8.41□□□□□ -1.06
TARDBP-201ENST00000240185 STAB1Q9NY15 2570 aa8.4□□□□□ -1.06
TARDBP-201ENST00000240185 AKAP13Q12802 2813 aa8.39□□□□□ -1.07
TARDBP-201ENST00000240185 WDFY4Q6ZS81 3184 aa8.39□□□□□ -1.07
TARDBP-201ENST00000240185 FRYLO94915 3013 aa8.38□□□□□ -1.07
TARDBP-201ENST00000240185 DMBT1Q9UGM3 2413 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-201ENST00000240185 CFAP54Q96N23 3096 aa8.37□□□□□ -1.07
TARDBP-201ENST00000240185 TNRC18O15417 2968 aaPredicted RBP8.36□□□□□ -1.07
TARDBP-201ENST00000240185 DMDP11532 3685 aa8.36□□□□□ -1.07
TARDBP-201ENST00000240185 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
TARDBP-201ENST00000240185 KRTAP26-1Q6PEX3 210 aa8.35□□□□□ -1.07
TARDBP-201ENST00000240185 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
TARDBP-201ENST00000240185 WDFY3Q8IZQ1 3526 aa8.34□□□□□ -1.07
TARDBP-201ENST00000240185 M0QZ58 72 aa8.34□□□□□ -1.07
TARDBP-201ENST00000240185 CELSR3Q9NYQ7 3312 aa8.32□□□□□ -1.08
TARDBP-201ENST00000240185 Q6ZR54 194 aa8.3□□□□□ -1.08
TARDBP-201ENST00000240185 A6NN06 94 aa8.3□□□□□ -1.08
TARDBP-201ENST00000240185 NBEAL1Q6ZS30 2694 aa8.29□□□□□ -1.08
TARDBP-201ENST00000240185 MUC3AQ02505 3323 aa8.29□□□□□ -1.08
TARDBP-201ENST00000240185 FREM2Q5SZK8 3169 aa8.29□□□□□ -1.08
TARDBP-201ENST00000240185 KRTAP25-1Q3LHN0 102 aa8.28□□□□□ -1.08
TARDBP-201ENST00000240185 STAB2Q8WWQ8 2551 aa8.28□□□□□ -1.08
TARDBP-201ENST00000240185 ITPR3Q14573 2671 aa8.28□□□□□ -1.08
TARDBP-201ENST00000240185 NDUFAF8A1L188 74 aa8.25□□□□□ -1.09
TARDBP-201ENST00000240185 FLNAP21333 2647 aaKnown RBP8.24□□□□□ -1.09
TARDBP-201ENST00000240185 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-201ENST00000240185 ADM2Q7Z4H4 148 aa8.2□□□□□ -1.1
TARDBP-201ENST00000240185 CHD6Q8TD26 2715 aa8.2□□□□□ -1.1
TARDBP-201ENST00000240185 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
TARDBP-201ENST00000240185 KRTAP1-3Q8IUG1 177 aa8.19□□□□□ -1.1
TARDBP-201ENST00000240185 KRTAP1-1Q07627 177 aa8.18□□□□□ -1.1
TARDBP-201ENST00000240185 NOTCH1P46531 2555 aa8.17□□□□□ -1.1
TARDBP-201ENST00000240185 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
TARDBP-201ENST00000240185 CENPEQ02224 2701 aa8.16□□□□□ -1.1
TARDBP-201ENST00000240185 PANO1I0J062 215 aa8.15□□□□□ -1.1
TARDBP-201ENST00000240185 A8MU10 97 aa8.13□□□□□ -1.11
TARDBP-201ENST00000240185 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
TARDBP-201ENST00000240185 KRTAP1-5Q9BYS1 174 aa8.09□□□□□ -1.11
TARDBP-201ENST00000240185 KRTAP4-16G5E9R7 235 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-201ENST00000240185 UNC79Q9P2D8 2635 aa8.07□□□□□ -1.12
TARDBP-201ENST00000240185 A0A087X002 238 aa8.06□□□□□ -1.12
TARDBP-201ENST00000240185 NOTCH2NLQ7Z3S9 236 aa8.06□□□□□ -1.12
TARDBP-201ENST00000240185 ASPMQ8IZT6 3477 aa8.04□□□□□ -1.12
TARDBP-201ENST00000240185 FRYQ5TBA9 3013 aa8.04□□□□□ -1.12
TARDBP-201ENST00000240185 CFAP46Q8IYW2 2715 aa8.03□□□□□ -1.12
TARDBP-201ENST00000240185 LOC400499M0QZD8 3231 aa8.02□□□□□ -1.12
TARDBP-201ENST00000240185 GCN1Q92616 2671 aaKnown RBP8□□□□□ -1.13
TARDBP-201ENST00000240185 LCE6AA0A183 80 aa8□□□□□ -1.13
TARDBP-201ENST00000240185 BOD1L1Q8NFC6 3051 aa7.99□□□□□ -1.13
TARDBP-201ENST00000240185 HELZ2Q9BYK8 2649 aaKnown RBP7.97□□□□□ -1.13
TARDBP-201ENST00000240185 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
TARDBP-201ENST00000240185 MGAQ8IWI9 3026 aa7.97□□□□□ -1.13
TARDBP-201ENST00000240185 TEX15Q9BXT5 2789 aa7.97□□□□□ -1.13
TARDBP-201ENST00000240185 DSPP15924 2871 aaKnown RBP7.97□□□□□ -1.13
TARDBP-201ENST00000240185 COL6A5A8TX70 2615 aa7.97□□□□□ -1.13
TARDBP-201ENST00000240185 TEP1Q99973 2627 aaKnown RBP7.96□□□□□ -1.14
TARDBP-201ENST00000240185 LAMA5O15230 3695 aa7.95□□□□□ -1.14
TARDBP-201ENST00000240185 Q5VSD8 79 aa7.95□□□□□ -1.14
TARDBP-201ENST00000240185 DMXL1Q9Y485 3027 aa7.95□□□□□ -1.14
TARDBP-201ENST00000240185 A8MUU9 505 aa7.93□□□□□ -1.14
TARDBP-201ENST00000240185 CFAP47Q6ZTR5 3102 aa7.93□□□□□ -1.14
TARDBP-201ENST00000240185 ZFHX4Q86UP3 3567 aa7.92□□□□□ -1.14
TARDBP-201ENST00000240185 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
TARDBP-201ENST00000240185 BAHCC1Q9P281 2608 aa7.91□□□□□ -1.14
TARDBP-201ENST00000240185 KRTAP11-1Q8IUC1 163 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms