RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 FAM104AQ969W3 186 aa12□□□□□ -0.49
MBD3-201ENST00000156825 NSD1Q96L73 2696 aaPredicted RBP11.99□□□□□ -0.49
MBD3-201ENST00000156825 SPEGQ15772 3267 aa11.99□□□□□ -0.49
MBD3-201ENST00000156825 FLG2Q5D862 2391 aaPredicted RBP11.97□□□□□ -0.49
MBD3-201ENST00000156825 KLKP1Q107X0 134 aa11.97□□□□□ -0.49
MBD3-201ENST00000156825 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
MBD3-201ENST00000156825 H7BZZ5 65 aa11.94□□□□□ -0.5
MBD3-201ENST00000156825 ATMQ13315 3056 aa11.92□□□□□ -0.5
MBD3-201ENST00000156825 FRYLO94915 3013 aa11.92□□□□□ -0.5
MBD3-201ENST00000156825 COL6A3P12111 3177 aa11.91□□□□□ -0.5
MBD3-201ENST00000156825 BOD1L1Q8NFC6 3051 aa11.9□□□□□ -0.5
MBD3-201ENST00000156825 Q8N1X5 172 aa11.9□□□□□ -0.5
MBD3-201ENST00000156825 KALRNO60229 2985 aa11.89□□□□□ -0.51
MBD3-201ENST00000156825 STAB2Q8WWQ8 2551 aa11.88□□□□□ -0.51
MBD3-201ENST00000156825 FLNCQ14315 2725 aa11.88□□□□□ -0.51
MBD3-201ENST00000156825 IGLV5-48A0A075B6I7 105 aa11.88□□□□□ -0.51
MBD3-201ENST00000156825 NBEAQ8NFP9 2946 aa11.87□□□□□ -0.51
MBD3-201ENST00000156825 COL12A1Q99715 3063 aa11.87□□□□□ -0.51
MBD3-201ENST00000156825 UQCR11O14957 56 aa11.86□□□□□ -0.51
MBD3-201ENST00000156825 ITPR1Q14643 2758 aa11.86□□□□□ -0.51
MBD3-201ENST00000156825 LINC00336Q6ZUF6 198 aa11.85□□□□□ -0.51
MBD3-201ENST00000156825 Q8NDZ9 215 aa11.84□□□□□ -0.51
MBD3-201ENST00000156825 IGLV5-37A0A075B6J1 123 aa11.84□□□□□ -0.51
MBD3-201ENST00000156825 PRR26Q8N8Z3 221 aa11.8□□□□□ -0.52
MBD3-201ENST00000156825 LINC01554Q52M75 96 aa11.79□□□□□ -0.52
MBD3-201ENST00000156825 ASH1LQ9NR48 2969 aaKnown RBP11.78□□□□□ -0.52
MBD3-201ENST00000156825 MIR22HGQ0VDD5 57 aa11.77□□□□□ -0.53
MBD3-201ENST00000156825 ADGRG4Q8IZF6 3080 aa11.77□□□□□ -0.53
MBD3-201ENST00000156825 EYSQ5T1H1 3165 aa11.77□□□□□ -0.53
MBD3-201ENST00000156825 CYP4F30PQ9H0H9 118 aa11.76□□□□□ -0.53
MBD3-201ENST00000156825 SPINT4Q6UDR6 99 aa11.75□□□□□ -0.53
MBD3-201ENST00000156825 WIPF1O43516 503 aa11.74□□□□□ -0.53
MBD3-201ENST00000156825 A0A0D9SG42 100 aa11.74□□□□□ -0.53
MBD3-201ENST00000156825 KRTAP1-5Q9BYS1 174 aa11.69□□□□□ -0.54
MBD3-201ENST00000156825 OCR1Q9BZK8 76 aa11.69□□□□□ -0.54
MBD3-201ENST00000156825 ITPR2Q14571 2701 aa11.68□□□□□ -0.54
MBD3-201ENST00000156825 DMBT1Q9UGM3 2413 aaPredicted RBP11.68□□□□□ -0.54
MBD3-201ENST00000156825 CFAP47Q6ZTR5 3102 aa11.67□□□□□ -0.54
MBD3-201ENST00000156825 RBM12B-AS1Q9P1G2 102 aa11.65□□□□□ -0.54
MBD3-201ENST00000156825 MYO15AQ9UKN7 3530 aa11.63□□□□□ -0.55
MBD3-201ENST00000156825 ZZEF1O43149 2961 aa11.63□□□□□ -0.55
MBD3-201ENST00000156825 UTP20O75691 2785 aaKnown RBP11.61□□□□□ -0.55
MBD3-201ENST00000156825 IGLV7-46A0A075B6I9 117 aa11.59□□□□□ -0.55
MBD3-201ENST00000156825 LRBAP50851 2863 aa11.59□□□□□ -0.55
MBD3-201ENST00000156825 SPANXA2-OT1Q8N9U9 137 aa11.58□□□□□ -0.55
MBD3-201ENST00000156825 CRIPTQ9P021 101 aa11.58□□□□□ -0.56
MBD3-201ENST00000156825 PLAC8Q9NZF1 115 aa11.56□□□□□ -0.56
MBD3-201ENST00000156825 SPTBN5Q9NRC6 3674 aaKnown RBP11.55□□□□□ -0.56
MBD3-201ENST00000156825 HIVEP1P15822 2718 aa11.55□□□□□ -0.56
MBD3-201ENST00000156825 SPRR1AP35321 89 aa11.55□□□□□ -0.56
MBD3-201ENST00000156825 Q6ZSA8 131 aa11.55□□□□□ -0.56
MBD3-201ENST00000156825 HRES1P13985 223 aa11.53□□□□□ -0.56
MBD3-201ENST00000156825 CD164Q04900 197 aa11.53□□□□□ -0.56
MBD3-201ENST00000156825 CRYBG3Q68DQ2 2970 aa11.53□□□□□ -0.56
MBD3-201ENST00000156825 Q8N9P0 234 aaPredicted RBP11.52□□□□□ -0.56
MBD3-201ENST00000156825 CELSR2Q9HCU4 2923 aa11.51□□□□□ -0.57
MBD3-201ENST00000156825 MMP24-AS1A0A0U1RRL7 71 aa11.5□□□□□ -0.57
MBD3-201ENST00000156825 KRTAP26-1Q6PEX3 210 aa11.48□□□□□ -0.57
MBD3-201ENST00000156825 CYSTM1Q9H1C7 97 aa11.46□□□□□ -0.57
MBD3-201ENST00000156825 KMT2BQ9UMN6 2715 aaPredicted RBP11.46□□□□□ -0.57
MBD3-201ENST00000156825 KRTAP10-2P60368 255 aa11.44□□□□□ -0.58
MBD3-201ENST00000156825 FAM229BQ4G0N7 80 aa11.43□□□□□ -0.58
MBD3-201ENST00000156825 TENM4Q6N022 2769 aa11.43□□□□□ -0.58
MBD3-201ENST00000156825 KRTAP10-1P60331 282 aa11.4□□□□□ -0.58
MBD3-201ENST00000156825 PANO1I0J062 215 aa11.39□□□□□ -0.59
MBD3-201ENST00000156825 LINC00472Q9H8W2 130 aa11.39□□□□□ -0.59
MBD3-201ENST00000156825 CDC42SE1Q9NRR8 79 aa11.39□□□□□ -0.59
MBD3-201ENST00000156825 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
MBD3-201ENST00000156825 APCP25054 2843 aa11.36□□□□□ -0.59
MBD3-201ENST00000156825 M0R2T5 61 aa11.34□□□□□ -0.59
MBD3-201ENST00000156825 SPRR1BP22528 89 aa11.34□□□□□ -0.59
MBD3-201ENST00000156825 KTN1-AS1Q86SY8 53 aa11.34□□□□□ -0.59
MBD3-201ENST00000156825 ZANQ9Y493 2812 aa11.33□□□□□ -0.6
MBD3-201ENST00000156825 A0A1B0GU33 70 aa11.32□□□□□ -0.6
MBD3-201ENST00000156825 Q5W150 140 aa11.31□□□□□ -0.6
MBD3-201ENST00000156825 TNRC18O15417 2968 aaPredicted RBP11.31□□□□□ -0.6
MBD3-201ENST00000156825 USP34Q70CQ2 3546 aa11.31□□□□□ -0.6
MBD3-201ENST00000156825 DCHS2Q6V1P9 2916 aa11.3□□□□□ -0.6
MBD3-201ENST00000156825 Q1T7F1 81 aa11.3□□□□□ -0.6
MBD3-201ENST00000156825 NIPBLQ6KC79 2804 aaeCLIP11.28□□□□□ -0.6
MBD3-201ENST00000156825 SPINK7P58062 85 aa11.28□□□□□ -0.6
MBD3-201ENST00000156825 Q5VSD8 79 aa11.27□□□□□ -0.61
MBD3-201ENST00000156825 CAMK2N1Q7Z7J9 78 aa11.26□□□□□ -0.61
MBD3-201ENST00000156825 LOC400499M0QZD8 3231 aa11.25□□□□□ -0.61
MBD3-201ENST00000156825 LCA10Q71F78 164 aa11.24□□□□□ -0.61
MBD3-201ENST00000156825 DMXL1Q9Y485 3027 aa11.22□□□□□ -0.61
MBD3-201ENST00000156825 LCE6AA0A183 80 aa11.22□□□□□ -0.61
MBD3-201ENST00000156825 FP248Q71RG6 208 aaPredicted RBP11.2□□□□□ -0.62
MBD3-201ENST00000156825 WDFY3Q8IZQ1 3526 aa11.18□□□□□ -0.62
MBD3-201ENST00000156825 CSAG1Q6PB30 78 aa11.17□□□□□ -0.62
MBD3-201ENST00000156825 KRTAP4-16G5E9R7 235 aaPredicted RBP11.16□□□□□ -0.62
MBD3-201ENST00000156825 S4R3F8 94 aa11.14□□□□□ -0.63
MBD3-201ENST00000156825 Q75L30 129 aa11.14□□□□□ -0.63
MBD3-201ENST00000156825 A0A087X002 238 aa11.14□□□□□ -0.63
MBD3-201ENST00000156825 LINC01558Q9Y6Z2 57 aa11.14□□□□□ -0.63
MBD3-201ENST00000156825 Q5XG85 94 aa11.13□□□□□ -0.63
MBD3-201ENST00000156825 Q6ZR54 194 aa11.11□□□□□ -0.63
MBD3-201ENST00000156825 KRTAP11-1Q8IUC1 163 aa11.1□□□□□ -0.63
MBD3-201ENST00000156825 PRAC1Q96KF2 57 aa11.08□□□□□ -0.64
MBD3-201ENST00000156825 NF1P21359 2839 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms