RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Usf3B2RUQ2 2221 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm29644A0A087WPG2 191 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Ccl6P27784 116 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Srsf1Q6PDM2 248 aaKnown RBP12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Stpg1Q9D2F5 341 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Igkv19-93A0A0G2JFZ3 115 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Repin1Q5U4E2 545 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Cox7a2lQ61387 111 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Ighv1-26A0A075B5V0 117 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Pom121l2Q5SW25 972 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm27027S4R1M6 97 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 P04219 140 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 PigyP0C1P0 71 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Loxl1P97873 607 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm10192Q3V0S1 108 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Fbxl7Q5BJ29 491 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Trav9-1A0A075B601 112 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Trav21-dv12A0A075B6C4 109 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Rbfox3Q8BIF2 374 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 VsirQ9D659 308 aa12.57□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Notch4P31695 1964 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 1110002E22RikE0CYV9 1786 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Itgb1bp1O35671 200 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Wnt2P21552 360 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Ypel3P61237 119 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Klf14Q19A41 325 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Ss18Q62280 418 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Tpsg1Q9QUL7 311 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Prima1Q810F0 153 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Q8BG31 207 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Prpf8Q99PV0 2335 aaKnown RBP12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm37388A0A0A6YY46 143 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 H2al2bA9Z055 111 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Tpsab1Q02844 273 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Tusc5Q8C838 173 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Parm1Q923D3 296 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Tex48Q9DA81 110 aa12.56□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Usp34Q6ZQ93 3582 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 P01789 122 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Hspe1Q64433 102 aaKnown RBP12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Lyzl1Q9CPX3 148 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Cox8bP48772 70 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Olfr1195Q8VG21 308 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Klk7Q91VE3 249 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Trbv3A0A0A6YYE2 117 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Col8a2P25318 699 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Oosp2Q4FZG8 168 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm1553Q66VB7 94 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Rpp25lQ99JH1 163 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Ssbp2Q9CYZ8 361 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm17660B9UIU9 90 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm933J3QPC1 141 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 P01725 110 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 TcraP01849 138 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Q8C708 225 aa12.55□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 PkdrejQ9Z0T6 2126 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 AdipoqQ60994 247 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Olfr1381Q7TQT4 311 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Olfr1199Q8VF94 310 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 HilpdaQ9JLS0 64 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Bak1O08734 209 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 AmelxP63277 210 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Defa23Q5G866 93 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm12253Q5NC48 229 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm9944Q8C559 102 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm4763Q8CFJ5 196 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Uqcrfs1Q9CR68 274 aa12.54□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm10638F6QEG2 257 aa12.53□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Reg1P43137 165 aa12.53□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Tmem129Q8K304 362 aa12.53□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 OtosQ8R448 89 aa12.53□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Trbv13-3A0A0B4J1H2 113 aa12.53□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Hint1P70349 126 aaKnown RBP12.53□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm36368A0A1D5RLK8 91 aa12.52□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 C1qtnf5Q8K479 243 aa12.52□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Ep300B2RWS6 2412 aa12.52□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Defa1P11477 93 aa12.52□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Defb30Q30KN4 75 aa12.52□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Prss58Q8BW11 241 aa12.52□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Q9D727 114 aa12.52□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gm10020E9QAZ2 204 aa12.52□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Wipf2Q6PEV3 440 aa12.52□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Nhlrc1Q8BR37 401 aa12.52□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Olfr1367Q8VFG2 316 aa12.52□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Rpl15Q9CZM2 204 aaKnown RBP12.52□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 AY761184Q9D848 116 aa12.52□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Gm45521A0A1B0GRK0 198 aa12.52□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Ttc9cQ810A3 171 aa12.52□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Cd69P37217 199 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Olfr975Q8VG91 310 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Immp1lQ9CQU8 166 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Dmrtc2Q8CGW9 370 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Slc25a39Q9D8K8 359 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Trav16d-dv11A0A075B617 117 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Psg25Q497W1 475 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 CstadQ9D245 104 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Tnfrsf13bQ9ET35 249 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 PerpQ9JK95 193 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 Tmem30bQ8BHG3 353 aa12.51□□□□□ -0.41
Ccdc88b-201ENSMUST00000113440 CklfQ9DAS1 152 aa12.51□□□□□ -0.41
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