RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Cypt14J3QPF7 87 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Pom121l2Q5SW25 972 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ighv3-1A0A075B5S6 116 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 OdamA1E960 273 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Gm5916G5E8W5 102 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Sh2d6Q9D413 297 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P04946 108 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 CfpP11680 464 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ccl5P30882 91 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Pla2g2aP31482 146 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Kif13aQ9EQW7 1749 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 AdgbG3UZ78 1657 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ighv5-12A0A075B5Q4 117 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Gm42543A0A0G2JET4 117 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Fxyd2Q04646 70 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Parp14Q2EMV9 1817 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01670 111 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01783 136 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Zfp2P08043 459 aa6.92□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Gm27021M0QWE2 156 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Mpv17P19258 176 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Atrnl1Q6A051 1378 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Scn4aQ9ER60 1841 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 9230113P08RikD3YWX3 137 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Gfi1bO70237 330 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Znf691Q3TDE8 283 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Sdhaf1Q3U276 118 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Gm815Q3UWS2 115 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Knl1Q66JQ7 1612 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Iqgap3F8VQ29 1632 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 1810062G17RikG3X8Y2 129 aa6.91□□□□□ -1.3
Clcn3-202ENSMUST00000056508 C920008G01RikA0A0B4J1N1 112 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Lyzl1Q9CPX3 148 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 HampQ9EQ21 83 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ighv1-72P01751 139 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ccl1P10146 92 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P18533 117 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Kdm6bQ5NCY0 1641 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Wfdc11A2A5H7 82 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ebi3O35228 228 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Rps11P62281 158 aaKnown RBP6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 BglapP86546 95 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Tmem123Q91Z22 195 aa6.9□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Supt4h1aP63271 117 aa6.9□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Gm9949Q8C9F4 104 aa6.9□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Mdc1Q5PSV9 1707 aa6.9□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Znf638Q61464 1960 aaKnown RBP6.9□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Igkv12-46A0A140T8P6 115 aa6.9□□□□□ -1.31
Clcn3-202ENSMUST00000056508 B230217C12RikE9Q3Z1 139 aa6.9□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Camk2n1Q6QWF9 78 aa6.9□□□□□ -1.31
Clcn3-202ENSMUST00000056508 C730034F03RikQ8BGL5 111 aa6.9□□□□□ -1.31
Clcn3-202ENSMUST00000056508 1700008P02RikQ9DAJ8 175 aa6.9□□□□□ -1.31
Clcn3-202ENSMUST00000056508 1700056E22RikF7CNM6 234 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ighv7-2A0A0A6YX91 119 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Igkv4-51A0N8I8 119 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Hmgn2P09602 90 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Fam53bQ8BGR5 422 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ifitm1Q9D103 106 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 C530025M09RikF6RGA8 229 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Gtsf1Q9DAN6 167 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Nupr1Q9WTK0 80 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Cacna1iE9Q7P2 2199 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Tubgcp6G5E8P0 1769 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Adamts13Q769J6 1426 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ighv1-13A0A075B5I0 98 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ighv2-3A0A075B696 115 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Gm10799F7C7U2 104 aa6.89□□□□□ -1.31
Clcn3-202ENSMUST00000056508 P01794 123 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Cxcl1P12850 96 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Tmem14cQ9CQN6 114 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Wdr38Q9D994 303 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Slit3Q9WVB4 1523 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Rnase1P00683 149 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ly6kQ9CWP4 154 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Itsn1Q9Z0R4 1714 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Igkv4-53A0A0G2JFC6 119 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Gnb1P62874 340 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ighv1-58A0A075B5W9 117 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Mroh1E0CZ22 1640 aa6.88□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Spef2Q8C9J3 1734 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Pla2g2eQ9QUL3 142 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Spry4Q9WTP2 300 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Robo1O89026 1612 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Acyp2P56375 106 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 1700025B11RikA0A087WNZ6 93 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Gm11213A0A1B0GR83 88 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 P01629 112 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Q8C5S3 137 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Q9DAL9 119 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Trav6-1A0A075B5Z8 112 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 P01634 136 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 4933414I15RikQ9D4D5 133 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 4930556J24RikQ9D4U7 146 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Tcl1b2P56841 117 aa6.87□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Tmem131lQ3U3D7 1597 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 UqcrqQ9CQ69 82 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Mpc2Q9D023 127 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Abcc10Q8R4P9 1501 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Q8BTC1 67 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Tmem141A2AJB2 108 aa6.86□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms