RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Cysltr1Q99JA4 352 aa8.01□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm8251F6VUT6 1994 aa8.01□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ighv8-6A0A0A6YXA3 118 aa8.01□□□□□ -1.13
Syne1-201ENSMUST00000041639 A0A1L1SR50 188 aa8.01□□□□□ -1.13
Syne1-201ENSMUST00000041639 P18528 98 aa8.01□□□□□ -1.13
Syne1-201ENSMUST00000041639 Tmem89Q9DA04 169 aa8.01□□□□□ -1.13
Syne1-201ENSMUST00000041639 Smlr1J3QMJ4 66 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 PolP10400 120 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm29423A0A087WRM1 55 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 4930596D02RikQ3V0H9 216 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Trip12G5E870 2025 aaKnown RBP8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Tex54G3UW99 86 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Isg15Q64339 161 aaKnown RBP8□□□□□ -1.13
Syne1-201ENSMUST00000041639 P01811 117 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 P04946 108 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Cdkn2aQ64364 169 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Lsm4Q9QXA5 137 aaKnown RBP8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm15080A2BI02 449 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Tmem238A9JSM3 176 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Insl3O09107 122 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Hbb-b2P02089 147 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Defa26Q3L180 93 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Dmrt3Q80WT2 476 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm5105Q8C6Y9 112 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Tmem190Q9D2E9 166 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm26727M0QWT1 121 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gpx1P11352 201 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Svs5P30933 122 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ube2v1Q9CZY3 147 aa8□□□□□ -1.13
Syne1-201ENSMUST00000041639 Igkv4-80A0A075B5L7 116 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 LtbP41155 306 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm94Q3V2D2 93 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Usmg5Q78IK2 58 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Mgst3Q9CPU4 153 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Foxi3E0CZH3 425 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Defb30Q30KN4 75 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Trav3-1Q5R1I8 114 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Mrpl53Q9D1H8 118 aaKnown RBP7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Fxyd1Q9Z239 92 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Trav7-1A0A0G2JEV5 112 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Nat8b-psE0CYC6 232 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 RtbdnQ8QZY4 247 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Timm10bQ9WV96 100 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 F5O88783 2183 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ighv1-49A0A0A6YWX2 117 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 BC035044E0CXF8 138 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Tm4sf19E9Q9H8 206 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Stpg1Q9D2F5 341 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 PerpQ9JK95 193 aa7.99□□□□□ -1.13
Syne1-201ENSMUST00000041639 Colca2F8VPY8 239 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Defa4P28311 92 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 1700084M14RikB1AT01 78 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Csrp1P97315 193 aaKnown RBP7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm6040Q4QY32 63 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 EpopQ7TNS8 369 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Plxna3P70208 1872 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm5089A1L3C8 106 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Trav7d-3Q5R1I1 112 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Hapln4Q80WM4 400 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ncoa6Q9JL19 2067 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ear14F6YUX7 155 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Lypd1Q8BLC3 141 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 9430097D07RikQ8BS47 195 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Rpp25lQ99JH1 163 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 TirapQ99JY1 241 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Mapk1ip1Q9D7G9 263 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ovol1Q9WTJ2 267 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Trav14n-3A0A075B645 120 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ighv1-18A0A0A6YXN4 117 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm12830F6XVH0 157 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 P01660 111 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ep300B2RWS6 2412 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 B1ARW8 110 aa7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Vdac2Q60930 295 aaKnown RBP7.98□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm9513B3GLJ6 99 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ly6c1P0CW02 131 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ca5aP23589 299 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Igkv4-63A0A0G2JFU6 117 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 MycbQ6P8Z1 170 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm27027S4R1M6 97 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Cox8bP48772 70 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ighv3-8A0A075B5T0 131 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Cox6b1P56391 86 aaKnown RBP7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Znhit3Q9CQK1 151 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Zfp648D3Z0W3 525 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Defa28D3Z1V9 94 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm10767Q3TQP0 103 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Defa25Q5G864 92 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 ArtnQ9Z0L2 224 aa7.97□□□□□ -1.13
Syne1-201ENSMUST00000041639 Ighv1-69A0A0G2JFS5 117 aa7.96□□□□□ -1.13
Syne1-201ENSMUST00000041639 Msrb2Q78J03 175 aa7.96□□□□□ -1.13
Syne1-201ENSMUST00000041639 Pygo1Q9D0P5 417 aa7.96□□□□□ -1.13
Syne1-201ENSMUST00000041639 Eml5Q8BQM8 1977 aa7.96□□□□□ -1.13
Syne1-201ENSMUST00000041639 Gm45213A0A0U1RNZ6 101 aa7.96□□□□□ -1.13
Syne1-201ENSMUST00000041639 Tomm40Q9QYA2 361 aa7.96□□□□□ -1.13
Syne1-201ENSMUST00000041639 Nup210lQ9D2F7 1881 aa7.96□□□□□ -1.13
Syne1-201ENSMUST00000041639 C1qtnf5Q8K479 243 aa7.96□□□□□ -1.14
Syne1-201ENSMUST00000041639 Ighv1-62-3P01754 117 aa7.96□□□□□ -1.14
Syne1-201ENSMUST00000041639 Gm10447Q3UQ92 135 aa7.96□□□□□ -1.14
Syne1-201ENSMUST00000041639 Prok2Q9QXU7 128 aa7.96□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms