RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Rab9aQ9R0M6 201 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ighv1-55A0A075B5W6 117 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ceacam15A0A0B4J1L0 234 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Gm20481G3UXK4 153 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Insig2Q91WG1 225 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Tomm6Q9CQN3 74 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ndufb3Q9CQZ6 104 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Wisp2Q9Z0G4 251 aa11.75□□□□□ -0.53
Nup54-201ENSMUST00000038514 Cacna1hO88427 2365 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ighv4-1A0A075B5R5 116 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ca1P13634 261 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Gsx1P31315 261 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Mrps21P58059 87 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Pde6hP61249 83 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Rnf24Q8BGI1 148 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ighv1-81A0A075B5Y4 117 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Onecut1O08755 465 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 CrxO54751 299 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Adam8Q05910 826 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Tctex1d2Q9CQ66 144 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 UrahQ9CRB3 118 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Rab1bQ9D1G1 201 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Tex48Q9DA81 110 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 Rnf114Q9ET26 229 aa11.74□□□□□ -0.53
Nup54-201ENSMUST00000038514 AtrxQ61687 2476 aaKnown RBP11.73□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ripply2Q2WG76 128 aa11.73□□□□□ -0.53
Nup54-201ENSMUST00000038514 Muc15Q8C6Z1 331 aa11.73□□□□□ -0.53
Nup54-201ENSMUST00000038514 Rasl10aQ8K5A4 203 aa11.73□□□□□ -0.53
Nup54-201ENSMUST00000038514 Olfr1243Q8VGM7 305 aa11.73□□□□□ -0.53
Nup54-201ENSMUST00000038514 Gm45521A0A1B0GRK0 198 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 Gm3285A0A1W2P7U0 201 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 D930048N14RikA2AA67 225 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ca2P00920 260 aaKnown RBP11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 P01748 117 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 Rchy1Q9CR50 261 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 Dmxl2Q8BPN8 3032 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 Ebi3O35228 228 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 Itgb1bp1O35671 200 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 NpsP0C0P8 89 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 SstP60041 116 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 Znf575Q3TXZ1 239 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 YrdcQ3U5F4 280 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 Lypd1Q8BLC3 141 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 GlrxQ9QUH0 107 aa11.72□□□□□ -0.53
Nup54-201ENSMUST00000038514 Trav16nA0A075B634 117 aa11.71□□□□□ -0.53
Nup54-201ENSMUST00000038514 Tstd1E9PY03 133 aa11.71□□□□□ -0.53
Nup54-201ENSMUST00000038514 Defa30E9QPZ2 93 aa11.71□□□□□ -0.53
Nup54-201ENSMUST00000038514 Cacng7P62956 275 aa11.71□□□□□ -0.53
Nup54-201ENSMUST00000038514 Rasl11aQ6IMB1 242 aa11.71□□□□□ -0.53
Nup54-201ENSMUST00000038514 Cysrt1Q9D1E4 142 aa11.71□□□□□ -0.53
Nup54-201ENSMUST00000038514 Sec11aQ9R0P6 179 aa11.71□□□□□ -0.53
Nup54-201ENSMUST00000038514 Map1aQ9QYR6 2776 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gm33815A0A087WNV3 176 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gm29644A0A087WPG2 191 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 Zc2hc1aQ8BJH1 324 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 GaptQ8CB93 157 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 Olfr1431Q8VF59 312 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 Olfr810Q8VFH9 312 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 PpdpfQ9CR37 115 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 Josd1Q9DBJ6 202 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 Rabac1Q9Z0S9 185 aa11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 BptfA2A654 3036 aaKnown RBP11.71□□□□□ -0.54
Nup54-201ENSMUST00000038514 Dopey1Q8BL99 2399 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ighv1-37A0A0A6YW32 117 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Esp23A8R0V5 104 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gm20517G3UVU6 152 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Emp2O88662 172 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Atp5iQ06185 71 aaKnown RBP11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gm10073E9Q3T0 114 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Gm26727M0QWT1 121 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Tmem95P0DJF3 176 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Znf239P24399 201 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Defa6P50704 93 aa11.7□□□□□ -0.54
Nup54-201ENSMUST00000038514 Amn1B8JKV0 258 aa11.69□□□□□ -0.54
Nup54-201ENSMUST00000038514 BC107364E9Q5A2 140 aa11.69□□□□□ -0.54
Nup54-201ENSMUST00000038514 Smad7O35253 426 aa11.69□□□□□ -0.54
Nup54-201ENSMUST00000038514 QrfpQ8CE23 124 aa11.69□□□□□ -0.54
Nup54-201ENSMUST00000038514 Tmem160Q9D938 188 aa11.69□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ighv1-20A0A0A6YX66 117 aa11.69□□□□□ -0.54
Nup54-201ENSMUST00000038514 CntfrO88507 372 aa11.69□□□□□ -0.54
Nup54-201ENSMUST00000038514 NdpP48744 131 aa11.69□□□□□ -0.54
Nup54-201ENSMUST00000038514 Spata46Q4FZF2 204 aa11.69□□□□□ -0.54
Nup54-201ENSMUST00000038514 A0A1Y7VMQ4 148 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Cdkn1aP39689 159 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Olfr1437Q7TQR7 312 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Vmn1r197Q8R265 298 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Prr23a3Q9CWP9 254 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 KalrnA2CG49 2964 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Csmd1Q923L3 3564 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Wfdc11A2A5H7 82 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 KprpB2RUR4 657 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ssbp4Q3U4B1 363 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Slc25a16Q8C0K5 332 aa11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Tppp3Q9CRB6 176 aaKnown RBP11.68□□□□□ -0.54
Nup54-201ENSMUST00000038514 Med12A2AGH6 2190 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 BokO35425 213 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 CnfnQ6PCW6 111 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Ccsmst1Q6RUT7 136 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Npc2Q9Z0J0 149 aa11.67□□□□□ -0.54
Nup54-201ENSMUST00000038514 Omt2bD3YX29 119 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 378.4 ms