RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Igkv4-80A0A075B5L7 116 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Igkv14-130A0A0G2JF45 117 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Igkv4-86A0A0G2JGE7 114 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Il19Q8CJ70 176 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 LtbP41155 306 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm7489Q3UT34 171 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Cd33Q63994 403 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Ighv3-8A0A075B5T0 131 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 PdpnQ62011 172 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Znf319Q9ERR8 581 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Ca1P13634 261 aa11.52□□□□□ -0.56
Col5a1-201ENSMUST00000028280 VsirQ9D659 308 aa11.52□□□□□ -0.56
Col5a1-201ENSMUST00000028280 PigyP0C1P0 71 aa11.52□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Csrp3P50462 194 aa11.52□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Ep300B2RWS6 2412 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm16686Q3UMN9 131 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Polr3kQ9CQZ7 108 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ovol1Q9WTJ2 267 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Trav14d-1A0A075B6B1 121 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Cr2P19070 1025 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 H2al1nQ497L1 109 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Sp9Q64HY3 484 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Plxna4Q80UG2 1893 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Brd3osA0A1B0GRB6 84 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Spred3Q6P6N5 408 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ifi27l2aQ8R412 90 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gkn1Q9CR36 201 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Rchy1Q9CR50 261 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 P18533 117 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ca5aP23589 299 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Spink8Q09TK9 105 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Rnf126Q91YL2 313 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm13090A2A899 111 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 SlpiP97430 131 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Tmem89Q9DA04 169 aa11.52□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Trav6d-3A0A075B6B3 112 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Tmem92B7ZWI3 162 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Trav6-3Q5R1E6 112 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Fam216aQ9DB54 251 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm10020E9QAZ2 204 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Cox6b1P56391 86 aaKnown RBP11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 B230104I21RikQ3USW4 141 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Rpl15Q9CZM2 204 aaKnown RBP11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Igkv15-103A0A140T8P3 115 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 3110018I06RikQ9CXS0 120 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Obsl1D3YYU8 1804 aaKnown RBP11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 CtsgP28293 261 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Mrpl53Q9D1H8 118 aaKnown RBP11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Tmem42Q9CR22 157 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Eml6Q5SQM0 1958 aa11.51□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Wipf3P0C7L0 485 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm10803Q3TZS6 135 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Mtatp8P03930 67 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Pear1Q8VIK5 1034 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 PmvkQ9D1G2 192 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ighv1-20A0A0A6YX66 117 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Igkv4-69A0A0B4J1I6 116 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Iglv3A0A0B4J1K5 122 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Saa4P31532 130 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 H2-DMb1P35737 261 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Tpsab1Q02844 273 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Rai1Q61818 1889 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Fer1l4A3KGK3 1992 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Tmem243B2RVB9 118 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Dscaml1Q4VA61 2053 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 P01724 129 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 P01727 129 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Q4KKZ1 196 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Olfr211Q8VGH2 309 aa11.5□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm21976J3QNN2 249 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Mst1P26928 716 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ss18l1Q8BW22 402 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ss18l2Q9D174 77 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Morn2Q6UL01 79 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm20481G3UXK4 153 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Jsrp1Q3MI48 332 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Zcwpw2Q08EN7 125 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Zglp1Q1WG82 266 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Tmem171Q4KL18 322 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Rnf125Q9D9R0 233 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Tmem219Q9D123 240 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Igkv3-1A0A075B5P1 119 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Igkv4-74A0A0B4J1I3 119 aa11.49□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Cd59bP58019 129 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 BC048502Q80Y74 154 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 BmperQ8CJ69 685 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Igkv4-78A0A0A6YYE5 119 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Foxh1O88621 401 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Reg3dQ9QUS9 175 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ly86O88188 162 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm42517A0A1Y7VLQ2 374 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Ighv5-12-4A0A0A6YWG4 117 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 SeboxP70368 190 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Gm10645Q3UPY1 145 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 NracQ8BNX7 165 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Dcaf12l1Q8CBW4 501 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Slc17a9Q8VCL5 447 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Igkv14-111A0A140T8P9 117 aa11.48□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Igkv4-79A0A075B5L8 119 aa11.47□□□□□ -0.57
Col5a1-201ENSMUST00000028280 Fxyd7P59648 80 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms