RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Cldn34c1Q8K193 234 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Ifi27l2aQ8R412 90 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Pxmp4Q9JJW0 212 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Ighv1-34A0A075B5V2 117 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Trav17A0A075B655 113 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Igkv5-37A0A140T8N4 115 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 P01793 123 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 P01843 105 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Smim6Q3U0I6 56 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Zg16Q8K0C5 167 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Tmed6Q9CQG0 239 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 3100002H09RikQ9CXW6 140 aa9.25□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Gm28778A0A087WSK7 233 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Cpsf4lE9Q2N0 280 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Olfr235E9Q9Z6 312 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Gm6871L7N248 545 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Egr1P08046 533 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Poldip2Q91VA6 368 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Rbmxl2Q9DAE2 385 aaKnown RBP9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Timm8a1Q9WVA2 97 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Zfp983E9PUT0 460 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Ube2l3P68037 154 aaKnown RBP9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Fam3dP97805 223 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Olfr1209Q3SXJ3 310 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Gm14137Q8CE97 175 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 HilpdaQ9JLS0 64 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Med12lQ8BQM9 2157 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Cd209gD3Z5D4 194 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Olfr177E9Q7W1 309 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Gm21719J3KMI9 230 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Scgb2b24Q7M747 112 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Znf146Q8BQN6 292 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Rpp25lQ99JH1 163 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Tomm6Q9CQN3 74 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Ap5s1Q9D742 170 aa9.24□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Nat8b-psE0CYC6 232 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Gm26661M0QWV4 156 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Nkx3-1P97436 237 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 RprmlQ3URD2 117 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Tff3Q62395 81 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Gm6812B1AXU1 112 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Gm12830F6XVH0 157 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 1700020N15RikL7MTX3 112 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 NrepQ07475 68 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 G430049J08RikQ3TL09 166 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Lyplal1Q3UFF7 239 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Stac2Q8R1B0 408 aa9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Smg1Q8BKX6 3658 aaKnown RBP9.23□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Trav3-4A0A075B654 114 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 1700067P10RikG3X8U2 183 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Olfr467L7N455 308 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Col8a1Q00780 744 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Ssbp4Q3U4B1 363 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Trav7-2Q5R1I3 112 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 CklfQ9DAS1 152 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Igkv1-133A0A0B4J1H8 120 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Lgals9O08573 353 aaKnown RBP9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Tnfsf12O54907 249 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Cst7O89098 144 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Ndufc2Q9CQ54 120 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 8030423J24RikQ9CX45 142 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Gm15294V9GXA7 121 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Trank1Q8BV79 2999 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Tmem8bB1AWJ5 472 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Olfr918E9PVZ7 325 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 P01791 123 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Q6DIA7 600 aa9.22□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Ighv5-4A0A075B5P9 117 aa9.21□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Ighv5-17A0A075B5R1 117 aa9.21□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Gm6096D3YTY6 151 aa9.21□□□□□ -0.93
Sdc1-201ENSMUST00000020911 P03980 138 aa9.21□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Lyrm7Q9DA03 104 aa9.21□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Znf22Q9ERU3 237 aa9.21□□□□□ -0.93
Sdc1-201ENSMUST00000020911 Igkv4-80A0A075B5L7 116 aa9.21□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Gm15128A2ADW8 449 aa9.21□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Zfp493E9Q1L8 384 aa9.21□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Olfr317Q5NCD6 327 aa9.21□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Olfr19Q9JHB2 309 aa9.21□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Igkv4-50A0A0B4J1J0 117 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Ighv8-12A0A0G2JDE1 119 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 RetnQ99P87 114 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Tmem190Q9D2E9 166 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Icam4Q9ERM2 262 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Lama5Q61001 3718 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Pax8Q00288 457 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Wfdc8Q4KUS1 273 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Ubald1Q6P3B2 176 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Cox19Q8K0C8 92 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Mlst8Q9DCJ1 326 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 IcosQ9WVS0 200 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Sptbn4E9PX29 2561 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Ly86O88188 162 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 ClcP97400 68 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Pear1Q8VIK5 1034 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 PigpQ9JHG1 132 aa9.2□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Igkv6-15A0A140T8M5 115 aa9.19□□□□□ -0.94
Sdc1-201ENSMUST00000020911 1700025C18RikA2A580 89 aa9.19□□□□□ -0.94
Sdc1-201ENSMUST00000020911 1700084M14RikB1AT01 78 aa9.19□□□□□ -0.94
Sdc1-201ENSMUST00000020911 PirtQ8BFY0 135 aa9.19□□□□□ -0.94
Sdc1-201ENSMUST00000020911 Csmd1Q923L3 3564 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 189.5 ms