RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ormdl3Q9CPZ6 153 aa14.67□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Tmem52Q9D702 196 aa14.67□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Zfp292Q9Z2U2 2698 aa14.66□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Cd3eP22646 189 aa14.66□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 TbpP29037 316 aa14.66□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Timm8bP62077 83 aaKnown RBP14.66□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Igfbpl1Q80W15 270 aa14.66□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 DspE9Q557 2883 aaKnown RBP14.66□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Tmem29A2ANF5 204 aa14.66□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Plscr4P58196 326 aa14.66□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Smg1Q8BKX6 3658 aaKnown RBP14.65□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Egr1P08046 533 aa14.65□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Lypd1Q8BLC3 141 aa14.65□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Olfr1012Q8VFJ7 311 aa14.65□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Borcs7Q9CRC6 105 aa14.65□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Malsu1Q9CWV0 228 aa14.65□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Ube2v1Q9CZY3 147 aa14.65□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Arpc1aQ9R0Q6 370 aa14.65□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Abca1P41233 2261 aa14.65□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Zfp109A0A0U1RPC5 652 aa14.65□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 CklfQ9DAS1 152 aa14.65□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Tomm40Q9QYA2 361 aa14.65□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Trav6n-6A0A075B6B2 114 aa14.64□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 BC030500E9Q6W0 185 aa14.64□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Icam2P35330 277 aa14.64□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Cphx2Q8BX39 182 aa14.63□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 RpeQ8VEE0 228 aa14.63□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Mrpl53Q9D1H8 118 aaKnown RBP14.63□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Card19Q9D1I2 183 aa14.63□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Piezo1E2JF22 2547 aa14.63□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Ighv8-4A0A0A6YW26 117 aa14.62□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Rhox7bA6PW38 321 aa14.62□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Pmis2Q497Q9 96 aa14.62□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Muc15Q8C6Z1 331 aa14.62□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Rasl10aQ8K5A4 203 aa14.62□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Gm15294V9GXA7 121 aa14.62□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Zfhx3Q61329 3726 aa14.62□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Wipf1Q8K1I7 493 aa14.62□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Gm33815A0A087WNV3 176 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Gm29644A0A087WPG2 191 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 UrahQ9CRB3 118 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Cysrt1Q9D1E4 142 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Ighv1-77A0A0G2JGS9 117 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Gm765B2RVL9 189 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Gm28305F6U473 122 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 P01791 123 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Znf239P24399 201 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Cd52Q64389 74 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Scnm1Q8K136 229 aa14.61□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Trav16nA0A075B634 117 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Gm5426J3QNM7 103 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Atp5iQ06185 71 aaKnown RBP14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Gm1968Q3T9I3 115 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 EsdQ9R0P3 282 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Ighv2-6A0A075B6A7 116 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Trav14n-2A0A0G2JDF5 121 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Trav23A0A0G2JG17 115 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Olfr235E9Q9Z6 312 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Brs3O54798 399 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Olfr149Q60888 311 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Spink6Q8BT20 105 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Tmem210Q9D2F0 147 aa14.6□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Ighv1-62-2A0A0A6YXZ4 119 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Gm45623A0A1B0GSF6 103 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 P01725 110 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Tdgf1P51865 171 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Znf575Q3TXZ1 239 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Ang6Q5GAN0 147 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Olfr553Q7TRS6 326 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Hnrnpa3Q8BG05 379 aaKnown RBP14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Adam8Q05910 826 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Ammecr1lQ8JZZ6 310 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Vmn1r62Q8R2C0 300 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Olfr1431Q8VF59 312 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 Stpg1Q9D2F5 341 aa14.59□□□□□ -0.07
Shkbp1-201ENSMUST00000003857 KprpB2RUR4 657 aa14.58□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Hyls1Q9CXX0 307 aa14.58□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Olfr873Q8VFJ0 319 aa14.58□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Mrpl33Q9CQP0 65 aa14.58□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Igkv4-57A0A0A6YYE7 117 aa14.57□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 P0C913 63 aa14.57□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Cox8bP48772 70 aa14.57□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Trappc1Q5NCF2 145 aa14.57□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Mrpl16Q99N93 251 aa14.57□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Gm15292L7N231 93 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 FshbQ60687 130 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Parm1Q923D3 296 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Pla2g2dQ9WVF6 144 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Ighv1-20A0A0A6YX66 117 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Tstd1E9PY03 133 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Gm20517G3UVU6 152 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Gp9O88186 177 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Mc5rP41149 325 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Rnf24Q8BGI1 148 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Defa22Q8C1N8 93 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Olfr981Q8VEU2 310 aa14.56□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Gm5294J3QP53 216 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Obox7Q4KL20 218 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 E130116L18RikQ8BMV6 101 aa14.55□□□□□ -0.08
Shkbp1-201ENSMUST00000003857 Gm4763Q8CFJ5 196 aa14.55□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms