RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 M0R378 163 aa10.56□□□□□ -0.72
CLN6-218ENST00000637223 IGLV1-50A0A075B6I6 118 aa10.54□□□□□ -0.72
CLN6-218ENST00000637223 A0A0B4J2C4 111 aa10.54□□□□□ -0.72
CLN6-218ENST00000637223 KRTAP29-1A8MX34 341 aaPredicted RBP10.54□□□□□ -0.72
CLN6-218ENST00000637223 IGLV7-43P04211 117 aa10.54□□□□□ -0.72
CLN6-218ENST00000637223 A4D1N5 150 aa10.53□□□□□ -0.72
CLN6-218ENST00000637223 HMCN2Q8NDA2 5059 aa10.52□□□□□ -0.72
CLN6-218ENST00000637223 NHP2Q9NX24 153 aaKnown RBP10.52□□□□□ -0.73
CLN6-218ENST00000637223 NDUFC2O95298 119 aa10.51□□□□□ -0.73
CLN6-218ENST00000637223 BCE1O60756 84 aa10.5□□□□□ -0.73
CLN6-218ENST00000637223 SPINK6Q6UWN8 80 aa10.5□□□□□ -0.73
CLN6-218ENST00000637223 TRBV10-3A0A0K0K1G6 114 aa10.49□□□□□ -0.73
CLN6-218ENST00000637223 TRBV10-2A0A0K0K1G8 114 aa10.49□□□□□ -0.73
CLN6-218ENST00000637223 CFC1BP0CG36 223 aa10.49□□□□□ -0.73
CLN6-218ENST00000637223 CFC1P0CG37 223 aa10.49□□□□□ -0.73
CLN6-218ENST00000637223 REG3GQ6UW15 175 aa10.49□□□□□ -0.73
CLN6-218ENST00000637223 TMEM126AQ9H061 195 aa10.49□□□□□ -0.73
CLN6-218ENST00000637223 TAX1BP3O14907 124 aa10.48□□□□□ -0.73
CLN6-218ENST00000637223 RAB37Q96AX2 223 aa10.48□□□□□ -0.73
CLN6-218ENST00000637223 PRO1854Q9UHT4 67 aa10.48□□□□□ -0.73
CLN6-218ENST00000637223 C9orf118A6NHY6 69 aa10.46□□□□□ -0.73
CLN6-218ENST00000637223 ZNF861PO60384 105 aa10.46□□□□□ -0.73
CLN6-218ENST00000637223 S100A7L2Q5SY68 101 aa10.46□□□□□ -0.73
CLN6-218ENST00000637223 FAT3Q8TDW7 4589 aa10.45□□□□□ -0.74
CLN6-218ENST00000637223 TRAV13-2A0A0B4J235 113 aa10.45□□□□□ -0.74
CLN6-218ENST00000637223 PRYO14603 147 aa10.45□□□□□ -0.74
CLN6-218ENST00000637223 UBE2AP49459 152 aa10.45□□□□□ -0.74
CLN6-218ENST00000637223 FAM19A1Q7Z5A9 133 aa10.45□□□□□ -0.74
CLN6-218ENST00000637223 RPL28P46779 137 aaKnown RBP10.44□□□□□ -0.74
CLN6-218ENST00000637223 DIRC1Q969H9 104 aa10.44□□□□□ -0.74
CLN6-218ENST00000637223 KCNQ1DNQ9H478 68 aa10.44□□□□□ -0.74
CLN6-218ENST00000637223 LRP1Q07954 4544 aaKnown RBP10.43□□□□□ -0.74
CLN6-218ENST00000637223 IGLV6-57P01721 117 aa10.43□□□□□ -0.74
CLN6-218ENST00000637223 PRLHP81277 87 aa10.43□□□□□ -0.74
CLN6-218ENST00000637223 H0Y9J4 135 aa10.42□□□□□ -0.74
CLN6-218ENST00000637223 K7ERJ3 54 aa10.42□□□□□ -0.74
CLN6-218ENST00000637223 OR13C6PQ8NH95 151 aa10.42□□□□□ -0.74
CLN6-218ENST00000637223 KRTAP13-1Q8IUC0 172 aa10.41□□□□□ -0.74
CLN6-218ENST00000637223 LINC00337Q8N6G1 96 aa10.41□□□□□ -0.74
CLN6-218ENST00000637223 LYRM7Q5U5X0 104 aa10.4□□□□□ -0.74
CLN6-218ENST00000637223 TRAV23DV6A0A075B6W5 121 aa10.39□□□□□ -0.75
CLN6-218ENST00000637223 OXTP01178 125 aa10.39□□□□□ -0.75
CLN6-218ENST00000637223 SPRR1AP35321 89 aa10.39□□□□□ -0.75
CLN6-218ENST00000637223 ETDCA0A1B0GVM5 59 aa10.38□□□□□ -0.75
CLN6-218ENST00000637223 H3BUT2 72 aa10.37□□□□□ -0.75
CLN6-218ENST00000637223 TSPAN13O95857 204 aa10.37□□□□□ -0.75
CLN6-218ENST00000637223 FABP2P12104 132 aa10.37□□□□□ -0.75
CLN6-218ENST00000637223 CBY1Q9Y3M2 126 aa10.37□□□□□ -0.75
CLN6-218ENST00000637223 A0A1W2PPM0 123 aa10.36□□□□□ -0.75
CLN6-218ENST00000637223 KRTAP4-16G5E9R7 235 aaPredicted RBP10.36□□□□□ -0.75
CLN6-218ENST00000637223 RPL13AP40429 203 aaKnown RBP10.35□□□□□ -0.75
CLN6-218ENST00000637223 HIGD2AQ9BW72 106 aa10.35□□□□□ -0.75
CLN6-218ENST00000637223 A0A1B0GV90 55 aa10.34□□□□□ -0.75
CLN6-218ENST00000637223 ZNF73O43830 326 aaPredicted RBP10.34□□□□□ -0.75
CLN6-218ENST00000637223 COX6CP09669 75 aa10.34□□□□□ -0.75
CLN6-218ENST00000637223 LINC01600Q96MT4 127 aa10.34□□□□□ -0.75
CLN6-218ENST00000637223 B5MCH6 92 aa10.33□□□□□ -0.76
CLN6-218ENST00000637223 Q1RN00 199 aa10.33□□□□□ -0.76
CLN6-218ENST00000637223 TRBV20-1A0A075B6N2 111 aa10.32□□□□□ -0.76
CLN6-218ENST00000637223 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
CLN6-218ENST00000637223 VAMP3Q15836 100 aa10.31□□□□□ -0.76
CLN6-218ENST00000637223 GTF2H5Q6ZYL4 71 aa10.31□□□□□ -0.76
CLN6-218ENST00000637223 MT1HL1P0DM35 61 aa10.3□□□□□ -0.76
CLN6-218ENST00000637223 PSMB2P49721 201 aa10.3□□□□□ -0.76
CLN6-218ENST00000637223 Q6ZRX8 168 aa10.29□□□□□ -0.76
CLN6-218ENST00000637223 SMCR5Q8TEV8 140 aa10.29□□□□□ -0.76
CLN6-218ENST00000637223 H7C2G1 150 aa10.28□□□□□ -0.76
CLN6-218ENST00000637223 C6orf99Q4VX62 202 aa10.28□□□□□ -0.76
CLN6-218ENST00000637223 PRR26Q8N8Z3 221 aa10.28□□□□□ -0.76
CLN6-218ENST00000637223 Q9BRP9 147 aa10.28□□□□□ -0.76
CLN6-218ENST00000637223 TNXBP22105 4242 aa10.27□□□□□ -0.76
CLN6-218ENST00000637223 H0YGX0 51 aa10.27□□□□□ -0.77
CLN6-218ENST00000637223 K7EP34 96 aa10.27□□□□□ -0.77
CLN6-218ENST00000637223 TRIAP1O43715 76 aa10.27□□□□□ -0.77
CLN6-218ENST00000637223 SCGB1C2P0DMR2 95 aa10.27□□□□□ -0.77
CLN6-218ENST00000637223 ANAPC11Q9NYG5 84 aa10.27□□□□□ -0.77
CLN6-218ENST00000637223 SPCS1Q9Y6A9 102 aa10.27□□□□□ -0.77
CLN6-218ENST00000637223 SMIM11BQ8TCY0 68 aa10.26□□□□□ -0.77
CLN6-218ENST00000637223 NAA38Q9BRA0 125 aaKnown RBP10.26□□□□□ -0.77
CLN6-218ENST00000637223 RNF213Q63HN8 5207 aa10.26□□□□□ -0.77
CLN6-218ENST00000637223 ERC2-IT1O76042 136 aa10.25□□□□□ -0.77
CLN6-218ENST00000637223 COX7BP24311 80 aa10.25□□□□□ -0.77
CLN6-218ENST00000637223 KRTAP10-8P60410 259 aa10.25□□□□□ -0.77
CLN6-218ENST00000637223 UBE2V1Q13404 147 aa10.25□□□□□ -0.77
CLN6-218ENST00000637223 TRBV7-6A0A0J9YX20 115 aa10.23□□□□□ -0.77
CLN6-218ENST00000637223 ELOF1P60002 83 aaKnown RBP10.23□□□□□ -0.77
CLN6-218ENST00000637223 SPRR4Q96PI1 79 aa10.23□□□□□ -0.77
CLN6-218ENST00000637223 A0A087X002 238 aa10.22□□□□□ -0.77
CLN6-218ENST00000637223 ATXN8Q156A1 80 aa10.22□□□□□ -0.77
CLN6-218ENST00000637223 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
CLN6-218ENST00000637223 A0A1B0GX51 115 aa10.2□□□□□ -0.78
CLN6-218ENST00000637223 LST1O00453 97 aa10.19□□□□□ -0.78
CLN6-218ENST00000637223 TCL1BO95988 128 aa10.19□□□□□ -0.78
CLN6-218ENST00000637223 CRYGAP11844 174 aa10.19□□□□□ -0.78
CLN6-218ENST00000637223 DHRS4-AS1Q9P1J3 65 aa10.19□□□□□ -0.78
CLN6-218ENST00000637223 SNCGO76070 127 aa10.18□□□□□ -0.78
CLN6-218ENST00000637223 TRACP01848 142 aa10.18□□□□□ -0.78
CLN6-218ENST00000637223 FAM229BQ4G0N7 80 aa10.18□□□□□ -0.78
CLN6-218ENST00000637223 GAGE2AQ6NT46 116 aa10.18□□□□□ -0.78
CLN6-218ENST00000637223 ST20-AS1Q8NBB2 130 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms