RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ANKRD11Q6UB99 2663 aaPredicted RBP6.18□□□□□ -1.42
TNFRSF9-204ENST00000615230 PKD1L2Q7Z442 2459 aa6.18□□□□□ -1.42
TNFRSF9-204ENST00000615230 ABCA2Q9BZC7 2435 aa6.17□□□□□ -1.42
TNFRSF9-204ENST00000615230 Q5VSD8 79 aa6.17□□□□□ -1.42
TNFRSF9-204ENST00000615230 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
TNFRSF9-204ENST00000615230 SONP18583 2426 aaKnown RBP6.16□□□□□ -1.42
TNFRSF9-204ENST00000615230 SEC61BP60468 96 aaKnown RBP6.15□□□□□ -1.42
TNFRSF9-204ENST00000615230 CHD8Q9HCK8 2581 aa6.14□□□□□ -1.43
TNFRSF9-204ENST00000615230 K7EQZ3 153 aa6.14□□□□□ -1.43
TNFRSF9-204ENST00000615230 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.13□□□□□ -1.43
TNFRSF9-204ENST00000615230 IGLV5-48A0A075B6I7 105 aa6.12□□□□□ -1.43
TNFRSF9-204ENST00000615230 FP248Q71RG6 208 aaPredicted RBP6.11□□□□□ -1.43
TNFRSF9-204ENST00000615230 PRO0461Q9UI25 63 aa6.11□□□□□ -1.43
TNFRSF9-204ENST00000615230 PRR26Q8N8Z3 221 aa6.1□□□□□ -1.43
TNFRSF9-204ENST00000615230 MUC4Q99102 2169 aa6.09□□□□□ -1.43
TNFRSF9-204ENST00000615230 SMCPP49901 116 aaPredicted RBP6.09□□□□□ -1.43
TNFRSF9-204ENST00000615230 A8MUN3 132 aa6.09□□□□□ -1.44
TNFRSF9-204ENST00000615230 FAM104AQ969W3 186 aa6.09□□□□□ -1.44
TNFRSF9-204ENST00000615230 C1orf195Q5TG92 126 aa6.07□□□□□ -1.44
TNFRSF9-204ENST00000615230 Q6ZR54 194 aa6.07□□□□□ -1.44
TNFRSF9-204ENST00000615230 ANAPC11Q9NYG5 84 aa6.07□□□□□ -1.44
TNFRSF9-204ENST00000615230 SPRR1BP22528 89 aa6.05□□□□□ -1.44
TNFRSF9-204ENST00000615230 F8P00451 2351 aa6.05□□□□□ -1.44
TNFRSF9-204ENST00000615230 ABCA12Q86UK0 2595 aa6.05□□□□□ -1.44
TNFRSF9-204ENST00000615230 SPRR1AP35321 89 aa6.04□□□□□ -1.44
TNFRSF9-204ENST00000615230 MYO18BQ8IUG5 2567 aa6.04□□□□□ -1.44
TNFRSF9-204ENST00000615230 M0R2T5 61 aa6.03□□□□□ -1.44
TNFRSF9-204ENST00000615230 CEP295Q9C0D2 2601 aa6.02□□□□□ -1.45
TNFRSF9-204ENST00000615230 HRES1P13985 223 aa6.02□□□□□ -1.45
TNFRSF9-204ENST00000615230 SPTBN4Q9H254 2564 aa6.01□□□□□ -1.45
TNFRSF9-204ENST00000615230 A0A1W2PNM2 257 aa6.01□□□□□ -1.45
TNFRSF9-204ENST00000615230 KRTAP10-1P60331 282 aa6.01□□□□□ -1.45
TNFRSF9-204ENST00000615230 IGLV8-61A0A075B6I0 122 aa6□□□□□ -1.45
TNFRSF9-204ENST00000615230 COA5Q86WW8 74 aa6□□□□□ -1.45
TNFRSF9-204ENST00000615230 PSPHP1O15172 72 aa5.99□□□□□ -1.45
TNFRSF9-204ENST00000615230 SPANXA2-OT1Q8N9U9 137 aa5.99□□□□□ -1.45
TNFRSF9-204ENST00000615230 CYP4F30PQ9H0H9 118 aa5.99□□□□□ -1.45
TNFRSF9-204ENST00000615230 ZCCHC13Q8WW36 166 aaKnown RBP5.99□□□□□ -1.45
TNFRSF9-204ENST00000615230 LINC00483Q53H64 154 aa5.98□□□□□ -1.45
TNFRSF9-204ENST00000615230 RPS29P62273 56 aaKnown RBP5.98□□□□□ -1.45
TNFRSF9-204ENST00000615230 UQCR11O14957 56 aa5.98□□□□□ -1.45
TNFRSF9-204ENST00000615230 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
TNFRSF9-204ENST00000615230 FASNP49327 2511 aaKnown RBP5.97□□□□□ -1.45
TNFRSF9-204ENST00000615230 RPS28P62857 69 aaKnown RBP5.96□□□□□ -1.45
TNFRSF9-204ENST00000615230 C2CD3Q4AC94 2353 aa5.96□□□□□ -1.45
TNFRSF9-204ENST00000615230 KRTAP26-1Q6PEX3 210 aa5.96□□□□□ -1.46
TNFRSF9-204ENST00000615230 JMJD1CQ15652 2540 aa5.96□□□□□ -1.46
TNFRSF9-204ENST00000615230 KRTAP1-5Q9BYS1 174 aa5.95□□□□□ -1.46
TNFRSF9-204ENST00000615230 KRTAP10-2P60368 255 aa5.95□□□□□ -1.46
TNFRSF9-204ENST00000615230 EIF4EBP3O60516 100 aaPredicted RBP5.95□□□□□ -1.46
TNFRSF9-204ENST00000615230 LINC01600Q96MT4 127 aa5.95□□□□□ -1.46
TNFRSF9-204ENST00000615230 USP9XQ93008 2570 aaPredicted RBP5.93□□□□□ -1.46
TNFRSF9-204ENST00000615230 FN1P02751 2386 aaKnown RBP5.93□□□□□ -1.46
TNFRSF9-204ENST00000615230 ZFYVE26Q68DK2 2539 aa5.93□□□□□ -1.46
TNFRSF9-204ENST00000615230 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
TNFRSF9-204ENST00000615230 S4R3F8 94 aa5.92□□□□□ -1.46
TNFRSF9-204ENST00000615230 KLKP1Q107X0 134 aa5.9□□□□□ -1.46
TNFRSF9-204ENST00000615230 MYO9AB2RTY4 2548 aa5.89□□□□□ -1.47
TNFRSF9-204ENST00000615230 A0A0G2JQZ4 141 aa5.89□□□□□ -1.47
TNFRSF9-204ENST00000615230 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
TNFRSF9-204ENST00000615230 MIR22HGQ0VDD5 57 aa5.87□□□□□ -1.47
TNFRSF9-204ENST00000615230 Q8N1X5 172 aa5.86□□□□□ -1.47
TNFRSF9-204ENST00000615230 TLN2Q9Y4G6 2542 aa5.84□□□□□ -1.47
TNFRSF9-204ENST00000615230 Q6ZRN7 208 aaPredicted RBP5.83□□□□□ -1.48
TNFRSF9-204ENST00000615230 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
TNFRSF9-204ENST00000615230 ASB16-AS1Q495Z4 193 aa5.82□□□□□ -1.48
TNFRSF9-204ENST00000615230 USP9YO00507 2555 aaPredicted RBP5.8□□□□□ -1.48
TNFRSF9-204ENST00000615230 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
TNFRSF9-204ENST00000615230 LINC00472Q9H8W2 130 aa5.8□□□□□ -1.48
TNFRSF9-204ENST00000615230 EPG5Q9HCE0 2579 aa5.8□□□□□ -1.48
TNFRSF9-204ENST00000615230 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
TNFRSF9-204ENST00000615230 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
TNFRSF9-204ENST00000615230 PRO0628Q9UI54 55 aa5.78□□□□□ -1.48
TNFRSF9-204ENST00000615230 SPINK7P58062 85 aa5.77□□□□□ -1.49
TNFRSF9-204ENST00000615230 ACANP16112 2415 aa5.77□□□□□ -1.49
TNFRSF9-204ENST00000615230 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
TNFRSF9-204ENST00000615230 POLQO75417 2590 aa5.76□□□□□ -1.49
TNFRSF9-204ENST00000615230 OCR1Q9BZK8 76 aa5.75□□□□□ -1.49
TNFRSF9-204ENST00000615230 Q5XG85 94 aa5.75□□□□□ -1.49
TNFRSF9-204ENST00000615230 Q5W150 140 aa5.75□□□□□ -1.49
TNFRSF9-204ENST00000615230 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
TNFRSF9-204ENST00000615230 HECTD1Q9ULT8 2610 aa5.73□□□□□ -1.49
TNFRSF9-204ENST00000615230 HELZ2Q9BYK8 2649 aaKnown RBP5.73□□□□□ -1.49
TNFRSF9-204ENST00000615230 KRTAP4-16G5E9R7 235 aaPredicted RBP5.73□□□□□ -1.49
TNFRSF9-204ENST00000615230 MTORP42345 2549 aa5.72□□□□□ -1.49
TNFRSF9-204ENST00000615230 Q8NDZ9 215 aa5.72□□□□□ -1.49
TNFRSF9-204ENST00000615230 C4orf26Q17RF5 130 aa5.72□□□□□ -1.49
TNFRSF9-204ENST00000615230 USP34Q70CQ2 3546 aa5.72□□□□□ -1.49
TNFRSF9-204ENST00000615230 A0A1B0GU33 70 aa5.71□□□□□ -1.5
TNFRSF9-204ENST00000615230 H7BZZ5 65 aa5.7□□□□□ -1.5
TNFRSF9-204ENST00000615230 Q75L30 129 aa5.7□□□□□ -1.5
TNFRSF9-204ENST00000615230 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
TNFRSF9-204ENST00000615230 A0A0D9SG42 100 aa5.68□□□□□ -1.5
TNFRSF9-204ENST00000615230 R4GN34 69 aa5.68□□□□□ -1.5
TNFRSF9-204ENST00000615230 PANO1I0J062 215 aa5.67□□□□□ -1.5
TNFRSF9-204ENST00000615230 FLNAP21333 2647 aaKnown RBP5.67□□□□□ -1.5
TNFRSF9-204ENST00000615230 USP24Q9UPU5 2620 aa5.65□□□□□ -1.5
TNFRSF9-204ENST00000615230 ITPR3Q14573 2671 aa5.64□□□□□ -1.51
TNFRSF9-204ENST00000615230 A0A087X002 238 aa5.64□□□□□ -1.51
TNFRSF9-204ENST00000615230 H1FX-AS1Q4G0G2 97 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms