RNA–Protein interactions for RNA: ENST00000612641.1

SYNRG-218, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 280 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-218ENST00000612641 NAT8Q9UHE5 227 aa1.36□□□□□ -2.19
SYNRG-218ENST00000612641 LOC107984156A0A0G2JMH3 177 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 FABP5P3A8MUU1 101 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 C1orf196B1AJZ1 125 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 M0R378 163 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 LST1O00453 97 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 CRIP1P50238 77 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 TMBIM6P55061 237 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 FOXA3P55318 350 aaPredicted RBP1.35□□□□□ -2.19
SYNRG-218ENST00000612641 ARL17AQ8IVW1 177 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 OR10AG1Q8NH19 301 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 OTORQ9NRC9 128 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 LYRM2Q9NU23 88 aaPredicted RBP1.35□□□□□ -2.19
SYNRG-218ENST00000612641 MED9Q9NWA0 146 aa1.35□□□□□ -2.19
SYNRG-218ENST00000612641 TRAV13-1A0A0B4J241 112 aa1.34□□□□□ -2.19
SYNRG-218ENST00000612641 TRBV30A0A0K0K1B3 111 aa1.34□□□□□ -2.19
SYNRG-218ENST00000612641 TRDV1A0A1B0GX56 115 aa1.34□□□□□ -2.19
SYNRG-218ENST00000612641 LEPROTO15243 131 aa1.34□□□□□ -2.19
SYNRG-218ENST00000612641 PPBPP02775 128 aa1.34□□□□□ -2.19
SYNRG-218ENST00000612641 CD3DP04234 171 aa1.34□□□□□ -2.19
SYNRG-218ENST00000612641 MGPP08493 103 aa1.34□□□□□ -2.19
SYNRG-218ENST00000612641 S100A16Q96FQ6 103 aaKnown RBP1.34□□□□□ -2.19
SYNRG-218ENST00000612641 CYSTM1Q9H1C7 97 aa1.34□□□□□ -2.19
SYNRG-218ENST00000612641 TRBV6-5A0A0K0K1A5 114 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 A0A1B0GV50 99 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 SRP19P09132 144 aaKnown RBP1.33□□□□□ -2.2
SYNRG-218ENST00000612641 SMIM17P0DL12 118 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 ZNF25P17030 456 aaPredicted RBP1.33□□□□□ -2.2
SYNRG-218ENST00000612641 AQP4P55087 323 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 UBE2L3P68036 154 aaKnown RBP1.33□□□□□ -2.2
SYNRG-218ENST00000612641 RNASE10Q5GAN6 216 aaKnown RBP1.33□□□□□ -2.2
SYNRG-218ENST00000612641 C7orf65Q6ZTY9 151 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 MBD3L1Q8WWY6 194 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 LIMD2Q9BT23 127 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 FAM107BQ9H098 131 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 NIT2Q9NQR4 276 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 TMEM242Q9NWH2 141 aa1.33□□□□□ -2.2
SYNRG-218ENST00000612641 SSSCA1O60232 199 aa1.32□□□□□ -2.2
SYNRG-218ENST00000612641 TRGC1P0CF51 173 aa1.32□□□□□ -2.2
SYNRG-218ENST00000612641 SLC25A6P12236 298 aa1.32□□□□□ -2.2
SYNRG-218ENST00000612641 NCS1P62166 190 aa1.32□□□□□ -2.2
SYNRG-218ENST00000612641 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
SYNRG-218ENST00000612641 C9orf153Q5TBE3 101 aa1.32□□□□□ -2.2
SYNRG-218ENST00000612641 SNX29P2Q8IUI4 249 aa1.32□□□□□ -2.2
SYNRG-218ENST00000612641 GGACTQ9BVM4 153 aa1.32□□□□□ -2.2
SYNRG-218ENST00000612641 ARL2-SNX15V9GYD0 113 aa1.32□□□□□ -2.2
SYNRG-218ENST00000612641 SDC2P34741 201 aa1.31□□□□□ -2.2
SYNRG-218ENST00000612641 RAB5BP61020 215 aa1.31□□□□□ -2.2
SYNRG-218ENST00000612641 NDUFA5Q16718 116 aa1.31□□□□□ -2.2
SYNRG-218ENST00000612641 FAM74A1Q5RGS3 127 aa1.31□□□□□ -2.2
SYNRG-218ENST00000612641 SPANXN1Q5VSR9 72 aa1.31□□□□□ -2.2
SYNRG-218ENST00000612641 PYDC1Q8WXC3 89 aa1.31□□□□□ -2.2
SYNRG-218ENST00000612641 CNBD2Q96M20 576 aa1.31□□□□□ -2.2
SYNRG-218ENST00000612641 MRPS26Q9BYN8 205 aaKnown RBP1.31□□□□□ -2.2
SYNRG-218ENST00000612641 LSM5Q9Y4Y9 91 aaKnown RBP1.31□□□□□ -2.2
SYNRG-218ENST00000612641 SYNE1Q8NF91 8797 aaKnown RBP1.31□□□□□ -2.2
SYNRG-218ENST00000612641 TRBV10-2A0A0K0K1G8 114 aa1.3□□□□□ -2.2
SYNRG-218ENST00000612641 UBE2L5PA0A1B0GUS4 154 aa1.3□□□□□ -2.2
SYNRG-218ENST00000612641 C9orf170A2RU37 121 aa1.3□□□□□ -2.2
SYNRG-218ENST00000612641 NCR2O95944 276 aa1.3□□□□□ -2.2
SYNRG-218ENST00000612641 DEFA1P59665 94 aa1.3□□□□□ -2.2
SYNRG-218ENST00000612641 AP3S1Q92572 193 aa1.3□□□□□ -2.2
SYNRG-218ENST00000612641 C9orf16Q9BUW7 83 aa1.3□□□□□ -2.2
SYNRG-218ENST00000612641 SPRR2GQ9BYE4 73 aa1.3□□□□□ -2.2
SYNRG-218ENST00000612641 ERC2-IT1O76042 136 aa1.29□□□□□ -2.2
SYNRG-218ENST00000612641 Q1T7F1 81 aa1.29□□□□□ -2.2
SYNRG-218ENST00000612641 RPL39LQ96EH5 51 aaKnown RBP1.29□□□□□ -2.2
SYNRG-218ENST00000612641 IGKV3D-7A0A0C4DH55 119 aa1.28□□□□□ -2.2
SYNRG-218ENST00000612641 FXYD2P54710 66 aa1.28□□□□□ -2.2
SYNRG-218ENST00000612641 AKAP14Q86UN6 197 aa1.28□□□□□ -2.2
SYNRG-218ENST00000612641 TMEM229BQ8NBD8 167 aa1.28□□□□□ -2.2
SYNRG-218ENST00000612641 AP1S3Q96PC3 154 aa1.28□□□□□ -2.2
SYNRG-218ENST00000612641 NPCDR1Q9BY65 106 aa1.28□□□□□ -2.2
SYNRG-218ENST00000612641 GSKIPQ9P0R6 139 aa1.28□□□□□ -2.2
SYNRG-218ENST00000612641 EPDR1Q9UM22 224 aa1.28□□□□□ -2.2
SYNRG-218ENST00000612641 TRBV20OR9-2A0A075B6H5 130 aa1.27□□□□□ -2.21
SYNRG-218ENST00000612641 MT1XP80297 61 aa1.27□□□□□ -2.21
SYNRG-218ENST00000612641 Q6ZUT4 128 aa1.27□□□□□ -2.21
SYNRG-218ENST00000612641 C8orf59Q8N0T1 100 aaPredicted RBP1.27□□□□□ -2.21
SYNRG-218ENST00000612641 C5orf17Q8NAS9 161 aa1.27□□□□□ -2.21
SYNRG-218ENST00000612641 Q96NJ1 140 aa1.27□□□□□ -2.21
SYNRG-218ENST00000612641 RNASE7Q9H1E1 156 aaKnown RBP1.27□□□□□ -2.21
SYNRG-218ENST00000612641 SMIM31A0A1B0GVY4 71 aa1.26□□□□□ -2.21
SYNRG-218ENST00000612641 INMT-MINDY4F8WBC2 141 aa1.26□□□□□ -2.21
SYNRG-218ENST00000612641 I3L3M4 83 aa1.26□□□□□ -2.21
SYNRG-218ENST00000612641 HMGB3O15347 200 aaKnown RBP1.26□□□□□ -2.21
SYNRG-218ENST00000612641 CKS1BP61024 79 aa1.26□□□□□ -2.21
SYNRG-218ENST00000612641 CCL20P78556 96 aa1.26□□□□□ -2.21
SYNRG-218ENST00000612641 PMAIP1Q13794 54 aa1.26□□□□□ -2.21
SYNRG-218ENST00000612641 KHDC3LQ587J8 217 aa1.26□□□□□ -2.21
SYNRG-218ENST00000612641 TOMM7Q9P0U1 55 aa1.26□□□□□ -2.21
SYNRG-218ENST00000612641 AP3S2P59780 193 aa1.25□□□□□ -2.21
SYNRG-218ENST00000612641 IFITM2Q01629 132 aa1.25□□□□□ -2.21
SYNRG-218ENST00000612641 MCFD2Q8NI22 146 aa1.25□□□□□ -2.21
SYNRG-218ENST00000612641 WDR61Q9GZS3 305 aaKnown RBP1.25□□□□□ -2.21
SYNRG-218ENST00000612641 TGIF2-C20orf24A0A0A6YYL0 155 aa1.24□□□□□ -2.21
SYNRG-218ENST00000612641 PIGBOS1A0A0B4J2F0 54 aa1.24□□□□□ -2.21
SYNRG-218ENST00000612641 C7orf77A4D0Y5 90 aa1.24□□□□□ -2.21
SYNRG-218ENST00000612641 SFT2D2O95562 160 aa1.24□□□□□ -2.21
SYNRG-218ENST00000612641 S100A11P31949 105 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms