RNA–Protein interactions for RNA: ENST00000612641.1

SYNRG-218, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 280 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-218ENST00000612641 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
SYNRG-218ENST00000612641 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
SYNRG-218ENST00000612641 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
SYNRG-218ENST00000612641 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
SYNRG-218ENST00000612641 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
SYNRG-218ENST00000612641 FOXD1Q16676 465 aa15.62■□□□□ 0.09
SYNRG-218ENST00000612641 ADRA2BP18089 450 aa15.24■□□□□ 0.03
SYNRG-218ENST00000612641 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
SYNRG-218ENST00000612641 PIAS4Q8N2W9 510 aaPredicted RBP14.83□□□□□ -0.04
SYNRG-218ENST00000612641 MSH5O43196 834 aa14.36□□□□□ -0.11
SYNRG-218ENST00000612641 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
SYNRG-218ENST00000612641 KCNA4P22459 653 aa14.23□□□□□ -0.13
SYNRG-218ENST00000612641 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
SYNRG-218ENST00000612641 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
SYNRG-218ENST00000612641 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
SYNRG-218ENST00000612641 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
SYNRG-218ENST00000612641 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
SYNRG-218ENST00000612641 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
SYNRG-218ENST00000612641 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
SYNRG-218ENST00000612641 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
SYNRG-218ENST00000612641 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
SYNRG-218ENST00000612641 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
SYNRG-218ENST00000612641 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
SYNRG-218ENST00000612641 CSRNP3Q8WYN3 585 aa13.24□□□□□ -0.29
SYNRG-218ENST00000612641 ZBTB22O15209 634 aa13.07□□□□□ -0.32
SYNRG-218ENST00000612641 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
SYNRG-218ENST00000612641 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.33
SYNRG-218ENST00000612641 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
SYNRG-218ENST00000612641 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
SYNRG-218ENST00000612641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
SYNRG-218ENST00000612641 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
SYNRG-218ENST00000612641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
SYNRG-218ENST00000612641 HNRNPUL2Q1KMD3 747 aaKnown RBP12.56□□□□□ -0.4
SYNRG-218ENST00000612641 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
SYNRG-218ENST00000612641 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
SYNRG-218ENST00000612641 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
SYNRG-218ENST00000612641 APLP2Q06481 763 aa12.39□□□□□ -0.43
SYNRG-218ENST00000612641 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
SYNRG-218ENST00000612641 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SYNRG-218ENST00000612641 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
SYNRG-218ENST00000612641 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
SYNRG-218ENST00000612641 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
SYNRG-218ENST00000612641 CAPN15O75808 1086 aa12.09□□□□□ -0.47
SYNRG-218ENST00000612641 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
SYNRG-218ENST00000612641 FKBP8Q14318 412 aa11.98□□□□□ -0.49
SYNRG-218ENST00000612641 POLA2Q14181 598 aa11.95□□□□□ -0.5
SYNRG-218ENST00000612641 FBLN2P98095 1184 aa11.89□□□□□ -0.51
SYNRG-218ENST00000612641 ABCB7O75027 752 aa11.85□□□□□ -0.51
SYNRG-218ENST00000612641 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.52
SYNRG-218ENST00000612641 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
SYNRG-218ENST00000612641 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
SYNRG-218ENST00000612641 DSG3P32926 999 aa11.78□□□□□ -0.52
SYNRG-218ENST00000612641 SPDYE4A6NLX3 237 aa11.73□□□□□ -0.53
SYNRG-218ENST00000612641 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
SYNRG-218ENST00000612641 PROM2Q8N271 834 aa11.54□□□□□ -0.56
SYNRG-218ENST00000612641 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
SYNRG-218ENST00000612641 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
SYNRG-218ENST00000612641 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
SYNRG-218ENST00000612641 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
SYNRG-218ENST00000612641 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
SYNRG-218ENST00000612641 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
SYNRG-218ENST00000612641 SSUH2Q9Y2M2 353 aa11.41□□□□□ -0.58
SYNRG-218ENST00000612641 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
SYNRG-218ENST00000612641 VASPP50552 380 aaPredicted RBP11.33□□□□□ -0.6
SYNRG-218ENST00000612641 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYNRG-218ENST00000612641 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
SYNRG-218ENST00000612641 STAG3Q9UJ98 1225 aa11.27□□□□□ -0.61
SYNRG-218ENST00000612641 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
SYNRG-218ENST00000612641 IFNLR1Q8IU57 520 aaPredicted RBP11.17□□□□□ -0.62
SYNRG-218ENST00000612641 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
SYNRG-218ENST00000612641 MIER1Q8N108 512 aa11.12□□□□□ -0.63
SYNRG-218ENST00000612641 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
SYNRG-218ENST00000612641 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
SYNRG-218ENST00000612641 PLEKHG5O94827 1062 aa11.09□□□□□ -0.63
SYNRG-218ENST00000612641 REM2Q8IYK8 340 aaPredicted RBP11.05□□□□□ -0.64
SYNRG-218ENST00000612641 SPOCK2Q92563 424 aa11.04□□□□□ -0.64
SYNRG-218ENST00000612641 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
SYNRG-218ENST00000612641 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
SYNRG-218ENST00000612641 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
SYNRG-218ENST00000612641 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
SYNRG-218ENST00000612641 PKD2Q13563 968 aa10.89□□□□□ -0.67
SYNRG-218ENST00000612641 CREBZFQ9NS37 354 aa10.86□□□□□ -0.67
SYNRG-218ENST00000612641 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
SYNRG-218ENST00000612641 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
SYNRG-218ENST00000612641 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
SYNRG-218ENST00000612641 GSE1Q14687 1217 aa10.77□□□□□ -0.69
SYNRG-218ENST00000612641 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
SYNRG-218ENST00000612641 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
SYNRG-218ENST00000612641 NUBP1P53384 320 aa10.76□□□□□ -0.69
SYNRG-218ENST00000612641 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
SYNRG-218ENST00000612641 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
SYNRG-218ENST00000612641 DCAF8Q5TAQ9 597 aa10.72□□□□□ -0.69
SYNRG-218ENST00000612641 FAM212AQ96EL1 285 aa10.72□□□□□ -0.69
SYNRG-218ENST00000612641 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
SYNRG-218ENST00000612641 RGL2O15211 777 aa10.67□□□□□ -0.7
SYNRG-218ENST00000612641 CHRDL2Q6WN34 429 aa10.67□□□□□ -0.7
SYNRG-218ENST00000612641 PRKAR2AP13861 404 aaKnown RBP10.66□□□□□ -0.7
SYNRG-218ENST00000612641 FXR2P51116 673 aaKnown RBP eCLIP10.65□□□□□ -0.7
SYNRG-218ENST00000612641 RASEFQ8IZ41 740 aa10.65□□□□□ -0.7
SYNRG-218ENST00000612641 FARP1Q9Y4F1 1045 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms