RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 VAMP3Q15836 100 aa10.67□□□□□ -0.7
TOP3A-220ENST00000585031 LINC00308Q8TCZ7 52 aa10.67□□□□□ -0.7
TOP3A-220ENST00000585031 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
TOP3A-220ENST00000585031 A0A0U1RRA0 63 aa10.66□□□□□ -0.7
TOP3A-220ENST00000585031 H3BUT2 72 aa10.66□□□□□ -0.7
TOP3A-220ENST00000585031 CFC1BP0CG36 223 aa10.65□□□□□ -0.7
TOP3A-220ENST00000585031 CFC1P0CG37 223 aa10.65□□□□□ -0.7
TOP3A-220ENST00000585031 FAM19A5Q7Z5A7 132 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-220ENST00000585031 PRO1854Q9UHT4 67 aa10.65□□□□□ -0.7
TOP3A-220ENST00000585031 FABP2P12104 132 aa10.64□□□□□ -0.71
TOP3A-220ENST00000585031 NPC2P61916 151 aa10.64□□□□□ -0.71
TOP3A-220ENST00000585031 COX17Q14061 63 aa10.64□□□□□ -0.71
TOP3A-220ENST00000585031 RNF151Q2KHN1 245 aa10.64□□□□□ -0.71
TOP3A-220ENST00000585031 MIR7-3HGQ8N6C7 128 aa10.64□□□□□ -0.71
TOP3A-220ENST00000585031 DAND5Q8N907 189 aa10.64□□□□□ -0.71
TOP3A-220ENST00000585031 F8WDY8 70 aa10.63□□□□□ -0.71
TOP3A-220ENST00000585031 C10orf25Q5T742 122 aa10.63□□□□□ -0.71
TOP3A-220ENST00000585031 C2orf82Q6UX34 121 aa10.63□□□□□ -0.71
TOP3A-220ENST00000585031 A0A1W2PPM0 123 aa10.62□□□□□ -0.71
TOP3A-220ENST00000585031 PFN2P35080 140 aa10.62□□□□□ -0.71
TOP3A-220ENST00000585031 LYRM7Q5U5X0 104 aa10.62□□□□□ -0.71
TOP3A-220ENST00000585031 A0A087X002 238 aa10.61□□□□□ -0.71
TOP3A-220ENST00000585031 GTF2H5Q6ZYL4 71 aa10.61□□□□□ -0.71
TOP3A-220ENST00000585031 RETNLBQ9BQ08 111 aa10.6□□□□□ -0.71
TOP3A-220ENST00000585031 NAA38Q9BRA0 125 aaKnown RBP10.6□□□□□ -0.71
TOP3A-220ENST00000585031 Q1RN00 199 aa10.58□□□□□ -0.72
TOP3A-220ENST00000585031 SOSTDC1Q6X4U4 206 aa10.58□□□□□ -0.72
TOP3A-220ENST00000585031 TRBV30A0A0K0K1B3 111 aa10.57□□□□□ -0.72
TOP3A-220ENST00000585031 GAGE10A6NGK3 116 aa10.57□□□□□ -0.72
TOP3A-220ENST00000585031 UBE2V1Q13404 147 aa10.57□□□□□ -0.72
TOP3A-220ENST00000585031 GAGE2EQ4V326 116 aa10.57□□□□□ -0.72
TOP3A-220ENST00000585031 UNQ6190/PRO20217Q6UXQ8 127 aa10.57□□□□□ -0.72
TOP3A-220ENST00000585031 GAGE2DQ9UEU5 116 aa10.57□□□□□ -0.72
TOP3A-220ENST00000585031 K7EP34 96 aa10.56□□□□□ -0.72
TOP3A-220ENST00000585031 M0QXV9 152 aa10.56□□□□□ -0.72
TOP3A-220ENST00000585031 TLX1NBP0CAT3 122 aa10.56□□□□□ -0.72
TOP3A-220ENST00000585031 UBE2BP63146 152 aa10.56□□□□□ -0.72
TOP3A-220ENST00000585031 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
TOP3A-220ENST00000585031 C6orf48Q9UBA6 75 aa10.56□□□□□ -0.72
TOP3A-220ENST00000585031 SPCS1Q9Y6A9 102 aa10.56□□□□□ -0.72
TOP3A-220ENST00000585031 TRAV13-2A0A0B4J235 113 aa10.55□□□□□ -0.72
TOP3A-220ENST00000585031 ZNF861PO60384 105 aa10.55□□□□□ -0.72
TOP3A-220ENST00000585031 LOC107984156A0A0G2JMH3 177 aa10.54□□□□□ -0.72
TOP3A-220ENST00000585031 EIF4EBP3O60516 100 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-220ENST00000585031 PSMB2P49721 201 aa10.54□□□□□ -0.72
TOP3A-220ENST00000585031 ARL17AQ8IVW1 177 aa10.54□□□□□ -0.72
TOP3A-220ENST00000585031 H7C2G1 150 aa10.53□□□□□ -0.72
TOP3A-220ENST00000585031 TPRXLQ17RH7 258 aa10.52□□□□□ -0.73
TOP3A-220ENST00000585031 C9orf129Q5T035 196 aaKnown RBP10.52□□□□□ -0.73
TOP3A-220ENST00000585031 CDIP1Q9H305 208 aa10.52□□□□□ -0.73
TOP3A-220ENST00000585031 COX6CP09669 75 aa10.51□□□□□ -0.73
TOP3A-220ENST00000585031 SCGB1C2P0DMR2 95 aa10.51□□□□□ -0.73
TOP3A-220ENST00000585031 ANAPC11Q9NYG5 84 aa10.51□□□□□ -0.73
TOP3A-220ENST00000585031 NDUFC2O95298 119 aa10.5□□□□□ -0.73
TOP3A-220ENST00000585031 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
TOP3A-220ENST00000585031 KRTAP13-2Q52LG2 175 aa10.49□□□□□ -0.73
TOP3A-220ENST00000585031 TYMSOSQ8TAI1 123 aa10.49□□□□□ -0.73
TOP3A-220ENST00000585031 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-220ENST00000585031 KRTAP4-1Q9BYQ7 146 aa10.46□□□□□ -0.73
TOP3A-220ENST00000585031 IGKV2-28A0A075B6P5 120 aa10.45□□□□□ -0.74
TOP3A-220ENST00000585031 NDUFC2-KCTD14E9PQ53 114 aa10.45□□□□□ -0.74
TOP3A-220ENST00000585031 TRIAP1O43715 76 aa10.45□□□□□ -0.74
TOP3A-220ENST00000585031 IGKV2D-28P01615 120 aa10.45□□□□□ -0.74
TOP3A-220ENST00000585031 CRYGAP11844 174 aa10.45□□□□□ -0.74
TOP3A-220ENST00000585031 IGLV7-46A0A075B6I9 117 aa10.44□□□□□ -0.74
TOP3A-220ENST00000585031 LINC00337Q8N6G1 96 aa10.44□□□□□ -0.74
TOP3A-220ENST00000585031 OR13C6PQ8NH95 151 aa10.44□□□□□ -0.74
TOP3A-220ENST00000585031 ATXN8Q156A1 80 aa10.42□□□□□ -0.74
TOP3A-220ENST00000585031 C22orf24Q9Y442 160 aa10.42□□□□□ -0.74
TOP3A-220ENST00000585031 RPL28P46779 137 aaKnown RBP10.41□□□□□ -0.74
TOP3A-220ENST00000585031 TRBV10-2A0A0K0K1G8 114 aa10.4□□□□□ -0.74
TOP3A-220ENST00000585031 H3BMG7 143 aa10.4□□□□□ -0.74
TOP3A-220ENST00000585031 TCL1BO95988 128 aa10.4□□□□□ -0.74
TOP3A-220ENST00000585031 TMEM126AQ9H061 195 aa10.4□□□□□ -0.74
TOP3A-220ENST00000585031 XAGE1AQ9HD64 81 aa10.39□□□□□ -0.75
TOP3A-220ENST00000585031 F8W1H4 67 aa10.38□□□□□ -0.75
TOP3A-220ENST00000585031 NCR3O14931 201 aa10.38□□□□□ -0.75
TOP3A-220ENST00000585031 S100A7L2Q5SY68 101 aa10.38□□□□□ -0.75
TOP3A-220ENST00000585031 LINC00304Q8N9R0 145 aa10.37□□□□□ -0.75
TOP3A-220ENST00000585031 SMIM11BQ8TCY0 68 aa10.37□□□□□ -0.75
TOP3A-220ENST00000585031 CBY1Q9Y3M2 126 aa10.37□□□□□ -0.75
TOP3A-220ENST00000585031 H0YGX0 51 aa10.35□□□□□ -0.75
TOP3A-220ENST00000585031 BCE1O60756 84 aa10.35□□□□□ -0.75
TOP3A-220ENST00000585031 LST1O00453 97 aa10.34□□□□□ -0.75
TOP3A-220ENST00000585031 M0R378 163 aa10.33□□□□□ -0.76
TOP3A-220ENST00000585031 VPREB1P12018 145 aa10.33□□□□□ -0.76
TOP3A-220ENST00000585031 ASB16-AS1Q495Z4 193 aa10.33□□□□□ -0.76
TOP3A-220ENST00000585031 CLEC2BQ92478 149 aa10.33□□□□□ -0.76
TOP3A-220ENST00000585031 KRTAP13-1Q8IUC0 172 aa10.32□□□□□ -0.76
TOP3A-220ENST00000585031 Q8NDZ9 215 aa10.32□□□□□ -0.76
TOP3A-220ENST00000585031 C9JAW5 83 aa10.31□□□□□ -0.76
TOP3A-220ENST00000585031 IGLV6-57P01721 117 aa10.31□□□□□ -0.76
TOP3A-220ENST00000585031 LCE2CQ5TA81 110 aa10.31□□□□□ -0.76
TOP3A-220ENST00000585031 NKAPP1Q8N9T2 125 aa10.31□□□□□ -0.76
TOP3A-220ENST00000585031 PRO0461Q9UI25 63 aa10.31□□□□□ -0.76
TOP3A-220ENST00000585031 RPL37AP8A6NKH3 93 aa10.29□□□□□ -0.76
TOP3A-220ENST00000585031 SNCGO76070 127 aa10.29□□□□□ -0.76
TOP3A-220ENST00000585031 TRACP01848 142 aa10.29□□□□□ -0.76
TOP3A-220ENST00000585031 MRPL55Q7Z7F7 128 aaKnown RBP10.29□□□□□ -0.76
TOP3A-220ENST00000585031 SLC25A20O43772 301 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms