RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 PSMG4Q5JS54 123 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 PSENENQ9NZ42 101 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 RNF213Q63HN8 5207 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 MAGI2Q86UL8 1455 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 DNAH7Q8WXX0 4024 aa-0.67□□□□□ -2.52
SKA2-210ENST00000584089 EPRSP07814 1512 aaKnown RBP-0.68□□□□□ -2.52
SKA2-210ENST00000584089 PRDM15P57071 1507 aaPredicted RBP-0.68□□□□□ -2.52
SKA2-210ENST00000584089 CLTCQ00610 1675 aaKnown RBP-0.68□□□□□ -2.52
SKA2-210ENST00000584089 CMYA5Q8N3K9 4069 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 TRBV25-1A0A075B6N4 114 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 A0A087WVE0 104 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 CRYM-AS1A6NIL9 109 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 TMEM262E9PQX1 116 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 K7EP34 96 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 GNG7O60262 68 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 HMGN3Q15651 99 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 SUPT6HQ7KZ85 1726 aaKnown RBP-0.68□□□□□ -2.52
SKA2-210ENST00000584089 DEPDC5O75140 1603 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 NESP48681 1621 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 MLH3Q9UHC1 1453 aa-0.68□□□□□ -2.52
SKA2-210ENST00000584089 C5orf42Q9H799 3197 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 MYH4Q9Y623 1939 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 DNAH1Q9P2D7 4330 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 C7orf77A4D0Y5 90 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 NDUFA2O43678 99 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 GNGT1P63211 74 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 DEFA5Q01523 94 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 PMCHL1Q16048 86 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 ALKAL2Q6UX46 152 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 AP4S1Q9Y587 144 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 SPTAN1Q13813 2472 aaKnown RBP-0.69□□□□□ -2.52
SKA2-210ENST00000584089 FANCAO15360 1455 aa-0.69□□□□□ -2.52
SKA2-210ENST00000584089 THOC2Q8NI27 1593 aaKnown RBP-0.7□□□□□ -2.52
SKA2-210ENST00000584089 USP32Q8NFA0 1604 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 LOC105371267A0A1B0GV96 52 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 H7BZZ5 65 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 GNG4P50150 75 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 RPL38P63173 70 aaKnown RBP-0.7□□□□□ -2.52
SKA2-210ENST00000584089 S100A12P80511 92 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 CCDC58Q4VC31 144 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 LELP1Q5T871 98 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 SVBPQ8N300 66 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 POLR1AO95602 1720 aaPredicted RBP-0.7□□□□□ -2.52
SKA2-210ENST00000584089 DNHD1Q96M86 4753 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 MAGI3Q5TCQ9 1506 aa-0.7□□□□□ -2.52
SKA2-210ENST00000584089 ITPR1Q14643 2758 aa-0.71□□□□□ -2.52
SKA2-210ENST00000584089 RANBP2P49792 3224 aaKnown RBP-0.71□□□□□ -2.52
SKA2-210ENST00000584089 PZPP20742 1482 aa-0.71□□□□□ -2.52
SKA2-210ENST00000584089 SFTA2Q6UW10 78 aa-0.71□□□□□ -2.52
SKA2-210ENST00000584089 DEFB107AQ8IZN7 70 aa-0.71□□□□□ -2.52
SKA2-210ENST00000584089 TSC22D3Q99576 134 aa-0.71□□□□□ -2.52
SKA2-210ENST00000584089 CACFD1Q9UGQ2 172 aa-0.71□□□□□ -2.52
SKA2-210ENST00000584089 LTN1O94822 1766 aa-0.71□□□□□ -2.52
SKA2-210ENST00000584089 NWD1Q149M9 1564 aa-0.71□□□□□ -2.52
SKA2-210ENST00000584089 APOBP04114 4563 aaKnown RBP-0.71□□□□□ -2.52
SKA2-210ENST00000584089 SACSQ9NZJ4 4579 aa-0.72□□□□□ -2.52
SKA2-210ENST00000584089 COL12A1Q99715 3063 aa-0.72□□□□□ -2.52
SKA2-210ENST00000584089 FYCO1Q9BQS8 1478 aa-0.72□□□□□ -2.52
SKA2-210ENST00000584089 SCN11AQ9UI33 1791 aa-0.72□□□□□ -2.52
SKA2-210ENST00000584089 ZFYVE16Q7Z3T8 1539 aa-0.72□□□□□ -2.52
SKA2-210ENST00000584089 UQCRHP07919 91 aa-0.72□□□□□ -2.52
SKA2-210ENST00000584089 PPP3R1P63098 170 aa-0.72□□□□□ -2.52
SKA2-210ENST00000584089 PRLHP81277 87 aa-0.72□□□□□ -2.52
SKA2-210ENST00000584089 KRTAP19-5Q3LI72 72 aa-0.72□□□□□ -2.52
SKA2-210ENST00000584089 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.72□□□□□ -2.52
SKA2-210ENST00000584089 ROCK2O75116 1388 aaKnown RBP-0.72□□□□□ -2.53
SKA2-210ENST00000584089 ANKRD36BQ8N2N9 1353 aa-0.72□□□□□ -2.53
SKA2-210ENST00000584089 RGPD1P0DJD0 1748 aa-0.72□□□□□ -2.53
SKA2-210ENST00000584089 LRBAP50851 2863 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 LRRC7Q96NW7 1537 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 MYO3AQ8NEV4 1616 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 HMGN1P05114 100 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 C3orf79P0CE67 100 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 COX7BP24311 80 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 DEFB1P60022 68 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 HSD52Q0P140 79 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 UBE2D4Q9Y2X8 147 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 COL6A5A8TX70 2615 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 CFAP46Q8IYW2 2715 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 CCDC88BA6NC98 1476 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 ATP7BP35670 1465 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 ABCC10Q5T3U5 1492 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 NRXN1Q9ULB1 1477 aa-0.73□□□□□ -2.53
SKA2-210ENST00000584089 TRIOO75962 3097 aa-0.74□□□□□ -2.53
SKA2-210ENST00000584089 hADV29S1A0JD25 119 aa-0.74□□□□□ -2.53
SKA2-210ENST00000584089 EFCAB10A6NFE3 127 aa-0.74□□□□□ -2.53
SKA2-210ENST00000584089 H0YAA0 97 aa-0.74□□□□□ -2.53
SKA2-210ENST00000584089 CORTO00230 105 aa-0.74□□□□□ -2.53
SKA2-210ENST00000584089 SNAPC5O75971 98 aa-0.74□□□□□ -2.53
SKA2-210ENST00000584089 TRGV9Q99603 122 aa-0.74□□□□□ -2.53
SKA2-210ENST00000584089 S4R3F8 94 aa-0.74□□□□□ -2.53
SKA2-210ENST00000584089 DNAH8Q96JB1 4490 aa-0.74□□□□□ -2.53
SKA2-210ENST00000584089 LCE6AA0A183 80 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 ATOX1O00244 68 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 NDUFA3O95167 84 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 IGLC2P0DOY2 106 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 IGLC3P0DOY3 106 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 MT1XP80297 61 aa-0.75□□□□□ -2.53
SKA2-210ENST00000584089 MRPS10P82664 201 aaKnown RBP-0.75□□□□□ -2.53
SKA2-210ENST00000584089 DEFB110Q30KQ9 67 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms