RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 CASC10Q5T4H9 136 aa9.29□□□□□ -0.92
CSNK1D-217ENST00000581241 COX6B2Q6YFQ2 88 aa9.28□□□□□ -0.92
CSNK1D-217ENST00000581241 IGLV7-46A0A075B6I9 117 aa9.27□□□□□ -0.93
CSNK1D-217ENST00000581241 MUC4Q99102 2169 aa9.27□□□□□ -0.93
CSNK1D-217ENST00000581241 ATRXP46100 2492 aa9.26□□□□□ -0.93
CSNK1D-217ENST00000581241 RBM12B-AS1Q9P1G2 102 aa9.25□□□□□ -0.93
CSNK1D-217ENST00000581241 Q5XG85 94 aa9.25□□□□□ -0.93
CSNK1D-217ENST00000581241 J3QL48 77 aa9.24□□□□□ -0.93
CSNK1D-217ENST00000581241 ZNF575Q86XF7 245 aa9.24□□□□□ -0.93
CSNK1D-217ENST00000581241 NAV2Q8IVL1 2488 aa9.24□□□□□ -0.93
CSNK1D-217ENST00000581241 ACACBO00763 2458 aa9.23□□□□□ -0.93
CSNK1D-217ENST00000581241 CUL9Q8IWT3 2517 aa9.23□□□□□ -0.93
CSNK1D-217ENST00000581241 PTPN13Q12923 2485 aa9.22□□□□□ -0.93
CSNK1D-217ENST00000581241 FAM229BQ4G0N7 80 aa9.22□□□□□ -0.93
CSNK1D-217ENST00000581241 C2CD3Q4AC94 2353 aa9.21□□□□□ -0.93
CSNK1D-217ENST00000581241 SRCAPQ6ZRS2 3230 aa9.21□□□□□ -0.94
CSNK1D-217ENST00000581241 PRR26Q8N8Z3 221 aa9.2□□□□□ -0.94
CSNK1D-217ENST00000581241 LINC01558Q9Y6Z2 57 aa9.18□□□□□ -0.94
CSNK1D-217ENST00000581241 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
CSNK1D-217ENST00000581241 BDP1A6H8Y1 2624 aa9.16□□□□□ -0.94
CSNK1D-217ENST00000581241 LUZP6Q538Z0 58 aa9.15□□□□□ -0.94
CSNK1D-217ENST00000581241 HRES1P13985 223 aa9.15□□□□□ -0.94
CSNK1D-217ENST00000581241 EP400Q96L91 3159 aa9.14□□□□□ -0.95
CSNK1D-217ENST00000581241 SMR3BP02814 79 aaPredicted RBP9.14□□□□□ -0.95
CSNK1D-217ENST00000581241 A0A1B0GU33 70 aa9.14□□□□□ -0.95
CSNK1D-217ENST00000581241 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
CSNK1D-217ENST00000581241 Q8N9P0 234 aaPredicted RBP9.11□□□□□ -0.95
CSNK1D-217ENST00000581241 CYSTM1Q9H1C7 97 aa9.1□□□□□ -0.95
CSNK1D-217ENST00000581241 MMP24-AS1A0A0U1RRL7 71 aa9.1□□□□□ -0.95
CSNK1D-217ENST00000581241 TTC28Q96AY4 2481 aa9.09□□□□□ -0.95
CSNK1D-217ENST00000581241 NOTCH2Q04721 2471 aa9.09□□□□□ -0.95
CSNK1D-217ENST00000581241 Q5VV11 94 aa9.06□□□□□ -0.96
CSNK1D-217ENST00000581241 SONP18583 2426 aaKnown RBP9.06□□□□□ -0.96
CSNK1D-217ENST00000581241 PIEZO2Q9H5I5 2752 aa9.05□□□□□ -0.96
CSNK1D-217ENST00000581241 KRTAP1-3Q8IUG1 177 aa9.04□□□□□ -0.96
CSNK1D-217ENST00000581241 LINC00483Q53H64 154 aa9.03□□□□□ -0.96
CSNK1D-217ENST00000581241 PRAC1Q96KF2 57 aa9.02□□□□□ -0.97
CSNK1D-217ENST00000581241 DMAC1Q96GE9 116 aa9.02□□□□□ -0.97
CSNK1D-217ENST00000581241 Q8NDZ9 215 aa9□□□□□ -0.97
CSNK1D-217ENST00000581241 ZCCHC13Q8WW36 166 aaKnown RBP8.99□□□□□ -0.97
CSNK1D-217ENST00000581241 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
CSNK1D-217ENST00000581241 H3BS24 57 aa8.99□□□□□ -0.97
CSNK1D-217ENST00000581241 SPRR1AP35321 89 aa8.98□□□□□ -0.97
CSNK1D-217ENST00000581241 KRTAP1-1Q07627 177 aa8.97□□□□□ -0.97
CSNK1D-217ENST00000581241 IGF2RP11717 2491 aa8.97□□□□□ -0.97
CSNK1D-217ENST00000581241 SPINK7P58062 85 aa8.96□□□□□ -0.97
CSNK1D-217ENST00000581241 Q6ZSA8 131 aa8.96□□□□□ -0.97
CSNK1D-217ENST00000581241 CSAG1Q6PB30 78 aa8.96□□□□□ -0.98
CSNK1D-217ENST00000581241 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
CSNK1D-217ENST00000581241 Q5W150 140 aa8.95□□□□□ -0.98
CSNK1D-217ENST00000581241 S4R3F8 94 aa8.95□□□□□ -0.98
CSNK1D-217ENST00000581241 CCDC168Q8NDH2 2452 aa8.94□□□□□ -0.98
CSNK1D-217ENST00000581241 CAMK2N1Q7Z7J9 78 aa8.93□□□□□ -0.98
CSNK1D-217ENST00000581241 LINC00472Q9H8W2 130 aa8.93□□□□□ -0.98
CSNK1D-217ENST00000581241 TNP2Q05952 138 aa8.92□□□□□ -0.98
CSNK1D-217ENST00000581241 OXTP01178 125 aa8.91□□□□□ -0.98
CSNK1D-217ENST00000581241 PLAC8Q9NZF1 115 aa8.91□□□□□ -0.98
CSNK1D-217ENST00000581241 SPRR1BP22528 89 aa8.9□□□□□ -0.98
CSNK1D-217ENST00000581241 CACNA1AO00555 2505 aa8.89□□□□□ -0.99
CSNK1D-217ENST00000581241 LRRK2Q5S007 2527 aa8.88□□□□□ -0.99
CSNK1D-217ENST00000581241 FN1P02751 2386 aaKnown RBP8.86□□□□□ -0.99
CSNK1D-217ENST00000581241 CR1P17927 2039 aa8.84□□□□□ -0.99
CSNK1D-217ENST00000581241 A0A0A0MQY5 61 aa8.83□□□□□ -1
CSNK1D-217ENST00000581241 KRTAP26-1Q6PEX3 210 aa8.83□□□□□ -1
CSNK1D-217ENST00000581241 NCOR2Q9Y618 2525 aa8.81□□□□□ -1
CSNK1D-217ENST00000581241 ROMO1P60602 79 aa8.8□□□□□ -1
CSNK1D-217ENST00000581241 TLN1Q9Y490 2541 aaKnown RBP8.79□□□□□ -1
CSNK1D-217ENST00000581241 GOLGB1Q14789 3259 aaKnown RBP8.78□□□□□ -1
CSNK1D-217ENST00000581241 ASB16-AS1Q495Z4 193 aa8.77□□□□□ -1.01
CSNK1D-217ENST00000581241 MYO9AB2RTY4 2548 aa8.76□□□□□ -1.01
CSNK1D-217ENST00000581241 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
CSNK1D-217ENST00000581241 Q6ZR54 194 aa8.73□□□□□ -1.01
CSNK1D-217ENST00000581241 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
CSNK1D-217ENST00000581241 WDR87Q6ZQQ6 2873 aa8.73□□□□□ -1.01
CSNK1D-217ENST00000581241 ABCA12Q86UK0 2595 aa8.72□□□□□ -1.01
CSNK1D-217ENST00000581241 PIEZO1Q92508 2521 aa8.71□□□□□ -1.01
CSNK1D-217ENST00000581241 ANKRD17O75179 2603 aaKnown RBP8.71□□□□□ -1.02
CSNK1D-217ENST00000581241 R4GN34 69 aa8.67□□□□□ -1.02
CSNK1D-217ENST00000581241 DOPEY1Q5JWR5 2465 aa8.66□□□□□ -1.02
CSNK1D-217ENST00000581241 M0R2T5 61 aa8.65□□□□□ -1.02
CSNK1D-217ENST00000581241 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
CSNK1D-217ENST00000581241 MYO18BQ8IUG5 2567 aa8.64□□□□□ -1.03
CSNK1D-217ENST00000581241 CENPFP49454 3210 aa8.61□□□□□ -1.03
CSNK1D-217ENST00000581241 KRTAP4-16G5E9R7 235 aaPredicted RBP8.61□□□□□ -1.03
CSNK1D-217ENST00000581241 KRTAP1-5Q9BYS1 174 aa8.6□□□□□ -1.03
CSNK1D-217ENST00000581241 USP9XQ93008 2570 aaPredicted RBP8.6□□□□□ -1.03
CSNK1D-217ENST00000581241 TLN2Q9Y4G6 2542 aa8.58□□□□□ -1.04
CSNK1D-217ENST00000581241 SPATA8Q6RVD6 105 aa8.57□□□□□ -1.04
CSNK1D-217ENST00000581241 M0QZ58 72 aa8.55□□□□□ -1.04
CSNK1D-217ENST00000581241 JMJD1CQ15652 2540 aa8.54□□□□□ -1.04
CSNK1D-217ENST00000581241 A6NN06 94 aa8.54□□□□□ -1.04
CSNK1D-217ENST00000581241 SEC61BP60468 96 aaKnown RBP8.53□□□□□ -1.04
CSNK1D-217ENST00000581241 ADM2Q7Z4H4 148 aa8.52□□□□□ -1.05
CSNK1D-217ENST00000581241 ZNF462Q96JM2 2506 aa8.51□□□□□ -1.05
CSNK1D-217ENST00000581241 ANKRD11Q6UB99 2663 aaPredicted RBP8.49□□□□□ -1.05
CSNK1D-217ENST00000581241 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
CSNK1D-217ENST00000581241 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
CSNK1D-217ENST00000581241 Q5VSD8 79 aa8.45□□□□□ -1.06
CSNK1D-217ENST00000581241 LCE6AA0A183 80 aa8.45□□□□□ -1.06
CSNK1D-217ENST00000581241 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms