RNA–Protein interactions for RNA: ENST00000574194.1

ERCC4-205, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-205ENST00000574194 REV3LO60673 3130 aa0.03□□□□□ -2.4
ERCC4-205ENST00000574194 KIAA1109Q2LD37 5005 aa0.03□□□□□ -2.4
ERCC4-205ENST00000574194 SONP18583 2426 aaKnown RBP0.03□□□□□ -2.41
ERCC4-205ENST00000574194 NSD1Q96L73 2696 aaPredicted RBP0.02□□□□□ -2.41
ERCC4-205ENST00000574194 FLNCQ14315 2725 aa0.02□□□□□ -2.41
ERCC4-205ENST00000574194 MYCBP2O75592 4640 aa0.02□□□□□ -2.41
ERCC4-205ENST00000574194 SPTA1P02549 2419 aa0.02□□□□□ -2.41
ERCC4-205ENST00000574194 MED14O60244 1454 aa0.02□□□□□ -2.41
ERCC4-205ENST00000574194 STAB1Q9NY15 2570 aa0.01□□□□□ -2.41
ERCC4-205ENST00000574194 HSPG2P98160 4391 aa0.01□□□□□ -2.41
ERCC4-205ENST00000574194 LPAP08519 4548 aa0.01□□□□□ -2.41
ERCC4-205ENST00000574194 ADIRFQ15847 76 aa0.01□□□□□ -2.41
ERCC4-205ENST00000574194 WFDC13Q8IUB5 93 aa0.01□□□□□ -2.41
ERCC4-205ENST00000574194 S100A13Q99584 98 aa0.01□□□□□ -2.41
ERCC4-205ENST00000574194 CCDC18Q5T9S5 1454 aa0.01□□□□□ -2.41
ERCC4-205ENST00000574194 USP32Q8NFA0 1604 aa0.01□□□□□ -2.41
ERCC4-205ENST00000574194 POLR1AO95602 1720 aaPredicted RBP0.01□□□□□ -2.41
ERCC4-205ENST00000574194 HIVEP1P15822 2718 aa0□□□□□ -2.41
ERCC4-205ENST00000574194 NDUFB1O75438 58 aa0□□□□□ -2.41
ERCC4-205ENST00000574194 LTN1O94822 1766 aa0□□□□□ -2.41
ERCC4-205ENST00000574194 STAB2Q8WWQ8 2551 aa0□□□□□ -2.41
ERCC4-205ENST00000574194 ST20Q9HBF5 79 aa0□□□□□ -2.41
ERCC4-205ENST00000574194 DCHS2Q6V1P9 2916 aa-0□□□□□ -2.41
ERCC4-205ENST00000574194 PKD1L2Q7Z442 2459 aa-0.01□□□□□ -2.41
ERCC4-205ENST00000574194 HYDINQ4G0P3 5121 aa-0.01□□□□□ -2.41
ERCC4-205ENST00000574194 ZNF831Q5JPB2 1677 aa-0.01□□□□□ -2.41
ERCC4-205ENST00000574194 RYR3Q15413 4870 aa-0.01□□□□□ -2.41
ERCC4-205ENST00000574194 URB2Q14146 1524 aaKnown RBP-0.01□□□□□ -2.41
ERCC4-205ENST00000574194 NCOA2Q15596 1464 aa-0.01□□□□□ -2.41
ERCC4-205ENST00000574194 ALMS1Q8TCU4 4167 aa-0.01□□□□□ -2.41
ERCC4-205ENST00000574194 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.02□□□□□ -2.41
ERCC4-205ENST00000574194 HECTD4Q9Y4D8 3996 aa-0.02□□□□□ -2.41
ERCC4-205ENST00000574194 SETD2Q9BYW2 2564 aaPredicted RBP-0.02□□□□□ -2.41
ERCC4-205ENST00000574194 DEFB135Q30KP9 77 aa-0.02□□□□□ -2.41
ERCC4-205ENST00000574194 TEP1Q99973 2627 aaKnown RBP-0.02□□□□□ -2.41
ERCC4-205ENST00000574194 DIP2BQ9P265 1576 aa-0.02□□□□□ -2.41
ERCC4-205ENST00000574194 HERC1Q15751 4861 aa-0.03□□□□□ -2.41
ERCC4-205ENST00000574194 EP300Q09472 2414 aaPredicted RBP-0.03□□□□□ -2.41
ERCC4-205ENST00000574194 ABCA13Q86UQ4 5058 aa-0.03□□□□□ -2.41
ERCC4-205ENST00000574194 DOT1LQ8TEK3 1739 aa-0.03□□□□□ -2.41
ERCC4-205ENST00000574194 NDUFA3O95167 84 aa-0.03□□□□□ -2.41
ERCC4-205ENST00000574194 EPPK1P58107 5090 aaKnown RBP-0.03□□□□□ -2.41
ERCC4-205ENST00000574194 PIK3C2BO00750 1634 aa-0.03□□□□□ -2.41
ERCC4-205ENST00000574194 COL6A5A8TX70 2615 aa-0.03□□□□□ -2.41
ERCC4-205ENST00000574194 RGPD8O14715 1765 aaPredicted RBP-0.04□□□□□ -2.42
ERCC4-205ENST00000574194 RGPD5Q99666 1765 aa-0.04□□□□□ -2.42
ERCC4-205ENST00000574194 CREBBPQ92793 2442 aa-0.04□□□□□ -2.42
ERCC4-205ENST00000574194 TIAM2Q8IVF5 1701 aa-0.04□□□□□ -2.42
ERCC4-205ENST00000574194 HECTD1Q9ULT8 2610 aa-0.04□□□□□ -2.42
ERCC4-205ENST00000574194 CHD8Q9HCK8 2581 aa-0.04□□□□□ -2.42
ERCC4-205ENST00000574194 TENM2Q9NT68 2774 aa-0.04□□□□□ -2.42
ERCC4-205ENST00000574194 PRKDCP78527 4128 aaKnown RBP-0.04□□□□□ -2.42
ERCC4-205ENST00000574194 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.05□□□□□ -2.42
ERCC4-205ENST00000574194 USH2AO75445 5202 aa-0.05□□□□□ -2.42
ERCC4-205ENST00000574194 H3BUT2 72 aa-0.05□□□□□ -2.42
ERCC4-205ENST00000574194 FASNP49327 2511 aaKnown RBP-0.05□□□□□ -2.42
ERCC4-205ENST00000574194 MAP1BP46821 2468 aaKnown RBP-0.05□□□□□ -2.42
ERCC4-205ENST00000574194 ERVK-7P63135 1459 aa-0.05□□□□□ -2.42
ERCC4-205ENST00000574194 COL12A1Q99715 3063 aa-0.05□□□□□ -2.42
ERCC4-205ENST00000574194 NBEAL2Q6ZNJ1 2754 aa-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 DCAF1Q9Y4B6 1507 aa-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 WNK1Q9H4A3 2382 aa-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 IFI6P09912 130 aa-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 COX6B2Q6YFQ2 88 aa-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 SETXQ7Z333 2677 aaKnown RBP-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 ACANP16112 2415 aa-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 NWD1Q149M9 1564 aa-0.06□□□□□ -2.42
ERCC4-205ENST00000574194 C4AP0C0L4 1744 aa-0.07□□□□□ -2.42
ERCC4-205ENST00000574194 C4BP0C0L5 1744 aa-0.07□□□□□ -2.42
ERCC4-205ENST00000574194 A0A087WXM4 84 aa-0.07□□□□□ -2.42
ERCC4-205ENST00000574194 UMAD1C9J7I0 102 aa-0.07□□□□□ -2.42
ERCC4-205ENST00000574194 SPRR2BP35325 72 aa-0.07□□□□□ -2.42
ERCC4-205ENST00000574194 RIF1Q5UIP0 2472 aaKnown RBP-0.07□□□□□ -2.42
ERCC4-205ENST00000574194 ZANQ9Y493 2812 aa-0.07□□□□□ -2.42
ERCC4-205ENST00000574194 ARHGAP35Q9NRY4 1499 aa-0.08□□□□□ -2.42
ERCC4-205ENST00000574194 ARFGEF2Q9Y6D5 1785 aa-0.08□□□□□ -2.42
ERCC4-205ENST00000574194 IFI27P40305 119 aaPredicted RBP-0.08□□□□□ -2.42
ERCC4-205ENST00000574194 BVES-AS1Q5T3Y7 98 aa-0.08□□□□□ -2.42
ERCC4-205ENST00000574194 ATP5EP2Q5VTU8 51 aa-0.08□□□□□ -2.42
ERCC4-205ENST00000574194 MAGI3Q5TCQ9 1506 aa-0.08□□□□□ -2.42
ERCC4-205ENST00000574194 PDZD2O15018 2839 aa-0.09□□□□□ -2.42
ERCC4-205ENST00000574194 FLNAP21333 2647 aaKnown RBP-0.09□□□□□ -2.42
ERCC4-205ENST00000574194 ACACBO00763 2458 aa-0.09□□□□□ -2.42
ERCC4-205ENST00000574194 DOPEY1Q5JWR5 2465 aa-0.09□□□□□ -2.42
ERCC4-205ENST00000574194 APC2O95996 2303 aa-0.09□□□□□ -2.42
ERCC4-205ENST00000574194 ANKRD11Q6UB99 2663 aaPredicted RBP-0.09□□□□□ -2.42
ERCC4-205ENST00000574194 SRRM2Q9UQ35 2752 aaKnown RBP-0.09□□□□□ -2.42
ERCC4-205ENST00000574194 NESP48681 1621 aa-0.09□□□□□ -2.42
ERCC4-205ENST00000574194 LRP2P98164 4655 aa-0.1□□□□□ -2.43
ERCC4-205ENST00000574194 USP9XQ93008 2570 aaPredicted RBP-0.1□□□□□ -2.43
ERCC4-205ENST00000574194 SMIM13P0DJ93 91 aa-0.1□□□□□ -2.43
ERCC4-205ENST00000574194 NREPQ16612 68 aa-0.1□□□□□ -2.43
ERCC4-205ENST00000574194 ITPR1Q14643 2758 aa-0.1□□□□□ -2.43
ERCC4-205ENST00000574194 BPTFQ12830 3046 aa-0.11□□□□□ -2.43
ERCC4-205ENST00000574194 MGAM2Q2M2H8 2515 aa-0.11□□□□□ -2.43
ERCC4-205ENST00000574194 KDM5DQ9BY66 1539 aa-0.11□□□□□ -2.43
ERCC4-205ENST00000574194 MYO18BQ8IUG5 2567 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms