RNA–Protein interactions for RNA: ENST00000569376.5

TNRC6A-217, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 610 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-217ENST00000569376 LINC00167Q96N53 147 aa2.9□□□□□ -1.95
TNRC6A-217ENST00000569376 C2orf88Q9BSF0 95 aa2.9□□□□□ -1.95
TNRC6A-217ENST00000569376 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 A0A0J9YXY3 114 aa2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 CXCL5P42830 114 aa2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 FAM229BQ4G0N7 80 aa2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 ORMDL2Q53FV1 153 aa2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 TOMM6Q96B49 74 aa2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 NXT2Q9NPJ8 142 aaKnown RBP2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 ANAPC11Q9NYG5 84 aa2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 TOMM7Q9P0U1 55 aa2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
TNRC6A-217ENST00000569376 LINC01546A6NGU7 62 aa2.88□□□□□ -1.95
TNRC6A-217ENST00000569376 LINC00614P0C842 121 aa2.88□□□□□ -1.95
TNRC6A-217ENST00000569376 RAB5BP61020 215 aa2.88□□□□□ -1.95
TNRC6A-217ENST00000569376 HERVK_113P61574 105 aa2.88□□□□□ -1.95
TNRC6A-217ENST00000569376 TIMM17AQ99595 171 aa2.88□□□□□ -1.95
TNRC6A-217ENST00000569376 KRTAP4-1Q9BYQ7 146 aa2.88□□□□□ -1.95
TNRC6A-217ENST00000569376 RBM12B-AS1Q9P1G2 102 aa2.88□□□□□ -1.95
TNRC6A-217ENST00000569376 MT-ND4LP03901 98 aa2.87□□□□□ -1.95
TNRC6A-217ENST00000569376 COX7B2Q8TF08 81 aa2.87□□□□□ -1.95
TNRC6A-217ENST00000569376 CST9LQ9H4G1 147 aa2.87□□□□□ -1.95
TNRC6A-217ENST00000569376 A0A1B0GVG6 124 aa2.86□□□□□ -1.95
TNRC6A-217ENST00000569376 LINC01549A6NIU2 74 aa2.86□□□□□ -1.95
TNRC6A-217ENST00000569376 ADCYAP1P18509 176 aa2.86□□□□□ -1.95
TNRC6A-217ENST00000569376 LINC00304Q8N9R0 145 aa2.86□□□□□ -1.95
TNRC6A-217ENST00000569376 PLEKHB2Q96CS7 222 aa2.86□□□□□ -1.95
TNRC6A-217ENST00000569376 SCGB3A1Q96QR1 104 aa2.86□□□□□ -1.95
TNRC6A-217ENST00000569376 SIGMAR1Q99720 223 aa2.86□□□□□ -1.95
TNRC6A-217ENST00000569376 RETNLBQ9BQ08 111 aa2.86□□□□□ -1.95
TNRC6A-217ENST00000569376 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
TNRC6A-217ENST00000569376 IGKV2D-26A0A0A0MRZ7 120 aa2.85□□□□□ -1.95
TNRC6A-217ENST00000569376 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
TNRC6A-217ENST00000569376 CFC1P0CG37 223 aa2.85□□□□□ -1.95
TNRC6A-217ENST00000569376 UBE2AP49459 152 aa2.85□□□□□ -1.95
TNRC6A-217ENST00000569376 IFITM2Q01629 132 aa2.85□□□□□ -1.95
TNRC6A-217ENST00000569376 SPAG11AQ6PDA7 123 aa2.85□□□□□ -1.95
TNRC6A-217ENST00000569376 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
TNRC6A-217ENST00000569376 A0A1B0GV72 72 aa2.84□□□□□ -1.95
TNRC6A-217ENST00000569376 M0R378 163 aa2.84□□□□□ -1.95
TNRC6A-217ENST00000569376 SCO1O75880 301 aa2.84□□□□□ -1.95
TNRC6A-217ENST00000569376 COX17Q14061 63 aa2.84□□□□□ -1.95
TNRC6A-217ENST00000569376 Q1RN00 199 aa2.84□□□□□ -1.95
TNRC6A-217ENST00000569376 GNB1LQ9BYB4 327 aa2.84□□□□□ -1.95
TNRC6A-217ENST00000569376 TMEM126AQ9H061 195 aa2.84□□□□□ -1.95
TNRC6A-217ENST00000569376 SND1-IT1Q9HBX3 110 aa2.84□□□□□ -1.95
TNRC6A-217ENST00000569376 IGKV2-28A0A075B6P5 120 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 TRAV9-1A0A075B6T8 112 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 IGKV2D-28P01615 120 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 SPINK8P0C7L1 97 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 DDTP30046 118 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 PRLHP81277 87 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 SCGB1D4Q6XE38 83 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 FP248Q71RG6 208 aaPredicted RBP2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 C3orf22Q8N5N4 141 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 Q8NDZ9 215 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 USH2AO75445 5202 aa2.83□□□□□ -1.96
TNRC6A-217ENST00000569376 A0A096LNJ9 63 aa2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 H3BRM9 83 aa2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 IGLC3P0DOY3 106 aa2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 ZNF22P17026 224 aaPredicted RBP2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 MP68P56378 58 aa2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 JOSD1Q15040 202 aaPredicted RBP2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 ZNF625Q96I27 306 aaPredicted RBP2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 ERG28Q9UKR5 140 aa2.82□□□□□ -1.96
TNRC6A-217ENST00000569376 KRTAP19-2Q3LHN2 52 aa2.81□□□□□ -1.96
TNRC6A-217ENST00000569376 SPRR4Q96PI1 79 aa2.81□□□□□ -1.96
TNRC6A-217ENST00000569376 TMEM218A2RU14 115 aa2.8□□□□□ -1.96
TNRC6A-217ENST00000569376 SPINK1P00995 79 aa2.8□□□□□ -1.96
TNRC6A-217ENST00000569376 SPRR1AP35321 89 aa2.8□□□□□ -1.96
TNRC6A-217ENST00000569376 BATFQ16520 125 aa2.8□□□□□ -1.96
TNRC6A-217ENST00000569376 SFTA2Q6UW10 78 aa2.8□□□□□ -1.96
TNRC6A-217ENST00000569376 SMIM20Q8N5G0 67 aa2.8□□□□□ -1.96
TNRC6A-217ENST00000569376 YPEL4Q96NS1 127 aa2.8□□□□□ -1.96
TNRC6A-217ENST00000569376 ANAPC13Q9BS18 74 aa2.8□□□□□ -1.96
TNRC6A-217ENST00000569376 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 FABP9Q0Z7S8 132 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 LINC00483Q53H64 154 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 CLLU1Q5K131 121 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 FA2HQ7L5A8 372 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 SSBP3-AS1Q7Z2R9 100 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 BAGE3Q86Y29 109 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 DAND5Q8N907 189 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 SMCR5Q8TEV8 140 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 HIGD2AQ9BW72 106 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 SEC11CQ9BY50 192 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 KCNQ1DNQ9H478 68 aa2.79□□□□□ -1.96
TNRC6A-217ENST00000569376 LOC107984156A0A0G2JMH3 177 aa2.78□□□□□ -1.96
TNRC6A-217ENST00000569376 KRTAP16-1A8MUX0 517 aa2.78□□□□□ -1.96
TNRC6A-217ENST00000569376 KRTAP2-3P0C7H8 128 aa2.78□□□□□ -1.96
TNRC6A-217ENST00000569376 S100PP25815 95 aa2.78□□□□□ -1.96
TNRC6A-217ENST00000569376 NMUP48645 174 aa2.78□□□□□ -1.96
TNRC6A-217ENST00000569376 NDUFA6P56556 154 aa2.78□□□□□ -1.96
TNRC6A-217ENST00000569376 LINC00158P58513 81 aa2.78□□□□□ -1.96
TNRC6A-217ENST00000569376 RPS29P62273 56 aaKnown RBP2.78□□□□□ -1.96
TNRC6A-217ENST00000569376 C10orf91Q5T1B1 145 aa2.78□□□□□ -1.96
TNRC6A-217ENST00000569376 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms