RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CCL25O15444 150 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 SNCGO76070 127 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 HTN3P15516 51 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 UBE2D3P61077 147 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 UBE2D2P62837 147 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 UNQ6190/PRO20217Q6UXQ8 127 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 Q6ZUT4 128 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 ATP6V0E2Q8NHE4 81 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 WFDC10AQ9H1F0 79 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 NDUFA12Q9UI09 145 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 PRO0255Q9UI72 69 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 UBE2D4Q9Y2X8 147 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 SPCS1Q9Y6A9 102 aa1.84□□□□□ -2.11
CNOT1-209ENST00000566240 SPTAN1Q13813 2472 aaKnown RBP1.84□□□□□ -2.12
CNOT1-209ENST00000566240 DMDP11532 3685 aa1.84□□□□□ -2.12
CNOT1-209ENST00000566240 TRBV20-1A0A075B6N2 111 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 TRAV13-1A0A0B4J241 112 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 IGKV3D-7A0A0C4DH55 119 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 IGKV3OR2-268A0A0C4DH90 116 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 LOC107984156A0A0G2JMH3 177 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 K7EP34 96 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 K7ERU9 68 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 NDUFA1O15239 70 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 IFITM1P13164 125 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 ARL17AQ8IVW1 177 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 AMELXQ99217 191 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 ZNF462Q96JM2 2506 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 BSNQ9UPA5 3926 aa1.83□□□□□ -2.12
CNOT1-209ENST00000566240 ZZEF1O43149 2961 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 CSPG4Q6UVK1 2322 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 IGKV2D-26A0A0A0MRZ7 120 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 TRBV6-8A0A0A6YYG3 113 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 A0A1W2PPM0 123 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 ANGP03950 147 aaKnown RBP1.82□□□□□ -2.12
CNOT1-209ENST00000566240 SPINK8P0C7L1 97 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 UBE2D1P51668 147 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 ROMO1P60602 79 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 CKS1BP61024 79 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 C1orf137Q5JT78 98 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 TMEM254Q8TBM7 123 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 DEFB104AQ8WTQ1 72 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 RETNLBQ9BQ08 111 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 SPANXDQ9BXN6 97 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 SPANXCQ9NY87 97 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 TOMM7Q9P0U1 55 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 PRO1854Q9UHT4 67 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 ERG28Q9UKR5 140 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 ZFHX4Q86UP3 3567 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 NAV2Q8IVL1 2488 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 IGSF10Q6WRI0 2623 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 ASPMQ8IZT6 3477 aa1.82□□□□□ -2.12
CNOT1-209ENST00000566240 UBR5O95071 2799 aaPredicted RBP1.81□□□□□ -2.12
CNOT1-209ENST00000566240 SPENQ96T58 3664 aaKnown RBP1.81□□□□□ -2.12
CNOT1-209ENST00000566240 A0A0J9YY99 117 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 F8W1H4 67 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 H3BNG1 76 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 K7ERJ3 54 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 DNAL4O96015 105 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 ATXN8Q156A1 80 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 LELP1Q5T871 98 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 COX7B2Q8TF08 81 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 VPS25Q9BRG1 176 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 CDKN2A-AS1Q9UH64 79 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 LAMTOR3Q9UHA4 124 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 LRBAP50851 2863 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 ITPR1Q14643 2758 aa1.81□□□□□ -2.12
CNOT1-209ENST00000566240 KALRNO60229 2985 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 MYO18BQ8IUG5 2567 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 A0A096LPF7 62 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 TRAV13-2A0A0B4J235 113 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 TRAV10A0A0B4J240 114 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 DEFB4AO15263 64 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 IGHV3-30P01768 117 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 LINC00694P0DN24 101 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 IGHV3-30-5P0DP03 117 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 LINC00158P58513 81 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 CLPSL2Q6UWE3 100 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 SBSPONQ8IVN8 264 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 UBE2DNLQ8IWF7 75 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 Q8IZM0 81 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 WFDC9Q8NEX5 89 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 CDC42SE2Q9NRR3 84 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 WNK1Q9H4A3 2382 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 SPG11Q96JI7 2443 aa1.8□□□□□ -2.12
CNOT1-209ENST00000566240 USP9XQ93008 2570 aaPredicted RBP1.8□□□□□ -2.12
CNOT1-209ENST00000566240 DEFB131BA0A096LNP1 70 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 LINC00959A0A1B0GUT2 108 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 CCL18P55774 89 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 NPC2P61916 151 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 SPAG11BQ08648 103 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 COX17Q14061 63 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 DEFB121Q5J5C9 76 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 MUSTN1Q8IVN3 82 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 CARD19Q96LW7 228 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 SNURFQ9Y675 71 aa1.79□□□□□ -2.12
CNOT1-209ENST00000566240 KMT2BQ9UMN6 2715 aaPredicted RBP1.79□□□□□ -2.12
CNOT1-209ENST00000566240 ITPR3Q14573 2671 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 TRBV30A0A0K0K1B3 111 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 C9JAW5 83 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 H3BMG7 143 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms