RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SNRPGP15A8MWD9 76 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 H3BVH4 76 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 K7EIL1 84 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 K7EMI3 77 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 K7ERU9 68 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 IL5P05113 134 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 SFTA3P0C7M3 94 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 TRAPPC2P0DI81 140 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 TRAPPC2BP0DI82 140 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 HTN3P15516 51 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 HIST1H1BP16401 226 aaKnown RBP0.71□□□□□ -2.3
CHD9-215ENST00000565442 FAUP35544 74 aaKnown RBP0.71□□□□□ -2.3
CHD9-215ENST00000565442 CRIP1P50238 77 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 DEFB131AP59861 70 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 OCIAD2Q56VL3 154 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 MRPL54Q6P161 138 aaKnown RBP0.71□□□□□ -2.3
CHD9-215ENST00000565442 Q86TA4 180 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 KCNRGQ8N5I3 272 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 FAM167A-AS1Q96KT0 104 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 AQP10Q96PS8 301 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 RHPN1-AS1Q9BWJ2 59 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 NMES1Q9C002 83 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 BET1LQ9NYM9 111 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 DNAH10Q8IVF4 4471 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 TEP1Q99973 2627 aaKnown RBP0.71□□□□□ -2.3
CHD9-215ENST00000565442 LRRK2Q5S007 2527 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 ANKHD1Q8IWZ3 2542 aaKnown RBP0.71□□□□□ -2.3
CHD9-215ENST00000565442 ALMS1Q8TCU4 4167 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 PKD1L1Q8TDX9 2849 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 NBASA2RRP1 2371 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 AKAP6Q13023 2319 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 PRKDCP78527 4128 aaKnown RBP0.7□□□□□ -2.3
CHD9-215ENST00000565442 DNAH2Q9P225 4427 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 SNAPC5O75971 98 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 MGPP08493 103 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 ARMS2P0C7Q2 107 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 IGLC2P0DOY2 106 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 S100A1P23297 94 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 CBLN1P23435 193 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 GCHFRP30047 84 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 CKS2P33552 79 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 SNCAP37840 140 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 MRPS10P82664 201 aaKnown RBP0.7□□□□□ -2.3
CHD9-215ENST00000565442 SSBP1Q04837 148 aaKnown RBP0.7□□□□□ -2.3
CHD9-215ENST00000565442 ADIRFQ15847 76 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 CLLU1Q5K131 121 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 MINOS1Q5TGZ0 78 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 FAM74A4Q5TZK3 123 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 C10orf113Q5VZT2 155 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 TTC9CQ8N5M4 171 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 ATP6V0E2Q8NHE4 81 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 MYOZ3Q8TDC0 251 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 DYNLRB2Q8TF09 96 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 RPL39LQ96EH5 51 aaKnown RBP0.7□□□□□ -2.3
CHD9-215ENST00000565442 PMCHL2Q9BQD1 86 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 CACFD1Q9UGQ2 172 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 ARL2-SNX15V9GYD0 113 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 MED13LQ71F56 2210 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 DNHD1Q96M86 4753 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 MYO9AB2RTY4 2548 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.7□□□□□ -2.3
CHD9-215ENST00000565442 NBEAL1Q6ZS30 2694 aa0.7□□□□□ -2.3
CHD9-215ENST00000565442 SPTAN1Q13813 2472 aaKnown RBP0.7□□□□□ -2.3
CHD9-215ENST00000565442 MAST4O15021 2626 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 ACANP16112 2415 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 HYDINQ4G0P3 5121 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 STARD9Q9P2P6 4700 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 CCDC168Q8NDH2 2452 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 IGHV1-24A0A0C4DH33 117 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 CTXND1A0A1B0GTU2 59 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 UMAD1C9J7I0 102 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 IGHV3-30P01768 117 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 APOC3P02656 99 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 IGHV3-30-5P0DP03 117 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 DEFB130BP0DP73 79 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 DEFB130AP0DP74 79 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 WFDC2Q14508 124 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 DEFB114Q30KQ6 69 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 DEFB121Q5J5C9 76 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 SPATA8Q6RVD6 105 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 WFDC10BQ8IUB3 73 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 ATOH7Q8N100 152 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 C5orf17Q8NAS9 161 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.69□□□□□ -2.3
CHD9-215ENST00000565442 VSTM2AQ8TAG5 236 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 TRGV9Q99603 122 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 SMIM7Q9BQ49 75 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 AGPAT4-IT1Q9H0P7 198 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 PKD1P98161 4303 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 DYNC2H1Q8NCM8 4307 aaKnown RBP0.69□□□□□ -2.3
CHD9-215ENST00000565442 TGP01266 2768 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 SPG11Q96JI7 2443 aa0.69□□□□□ -2.3
CHD9-215ENST00000565442 ABCA1O95477 2261 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 SONP18583 2426 aaKnown RBP0.68□□□□□ -2.3
CHD9-215ENST00000565442 TRGV1A0A0A0MS02 117 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 TRAV2A0A0B4J234 112 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 TRBV30A0A0K0K1B3 111 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 FAM223BA6NKX1 122 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 CCDC179H3BU77 68 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 NDUFA4O00483 81 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms