RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 MIAQ16674 131 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 LINC00242Q5T6M2 205 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 C10orf126Q8N4M7 172 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 CDKN2A-AS1Q9UH64 79 aa2.08□□□□□ -2.08
SPG11-225ENST00000561391 DNAH8Q96JB1 4490 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 TRAV13-1A0A0B4J241 112 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 TRBV30A0A0K0K1B3 111 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 IBA57-AS1B1ANH7 110 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 TMEM262E9PQX1 116 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 SNCGO76070 127 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 LINC00694P0DN24 101 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 PSMB2P49721 201 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 OCIAD2Q56VL3 154 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 MEIG1Q5JSS6 88 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 FAM222AQ5U5X8 452 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 NTM-AS1Q6ZSK4 140 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 Q6ZUT4 128 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 MUSTN1Q8IVN3 82 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 FAM104AQ969W3 186 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 TTTY13Q9BZ97 58 aa2.07□□□□□ -2.08
SPG11-225ENST00000561391 IGHV3-64A0A075B6Q5 118 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 TRAV13-2A0A0B4J235 113 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 TRAV8-4A0A0B4J246 113 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 IGHV3OR16-9A0A0B4J2B5 98 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 LOC107984156A0A0G2JMH3 177 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 LINC00959A0A1B0GUT2 108 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 F5H768 121 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 H3BMG7 143 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 PANO1I0J062 215 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 K7ERJ3 54 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 APOMO95445 188 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 IGHV3-33P01772 117 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 SPINK8P0C7L1 97 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 CXCL5P42830 114 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 TSPEAR-AS2P59090 65 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 RPL37AP61513 92 aaKnown RBP2.06□□□□□ -2.08
SPG11-225ENST00000561391 COX17Q14061 63 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 ATXN8Q156A1 80 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 Q1RN00 199 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 C6orf226Q5I0X4 101 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 SCXQ7RTU7 201 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 ARL17AQ8IVW1 177 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 COX7B2Q8TF08 81 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 Q9UF83 564 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 ICOSQ9Y6W8 199 aa2.06□□□□□ -2.08
SPG11-225ENST00000561391 TRAV8-3A0A0A6YYJ7 113 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 F8WDY8 70 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 H0YGX0 51 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 COX7A2LO14548 114 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 TSPAN13O95857 204 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 CKS1BP61024 79 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 RBX1P62877 108 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 COX6A2Q02221 97 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 RNASE13Q5GAN3 156 aaKnown RBP2.05□□□□□ -2.08
SPG11-225ENST00000561391 Q6ZRU5 148 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 Q8IZM0 81 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 LINC00308Q8TCZ7 52 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 ZNF625Q96I27 306 aaPredicted RBP2.05□□□□□ -2.08
SPG11-225ENST00000561391 LINC01600Q96MT4 127 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 VPS25Q9BRG1 176 aa2.05□□□□□ -2.08
SPG11-225ENST00000561391 IGLV4-60A0A075B6I1 120 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 LOC100131303A0A0U1RQF7 123 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 ANGP03950 147 aaKnown RBP2.04□□□□□ -2.08
SPG11-225ENST00000561391 LINC00158P58513 81 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 REG3AQ06141 175 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 ESRGQ1W209 222 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 KRTAP13-3Q3SY46 172 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 LINC01620Q4KN68 170 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 TEN1Q86WV5 123 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 CIRBP-AS1Q8TBR5 109 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 PPDPFLQ8WWR9 84 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 CARD19Q96LW7 228 aa2.04□□□□□ -2.08
SPG11-225ENST00000561391 TRBV10-2A0A0K0K1G8 114 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 A0A1B0GX51 115 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 H3BQ85 93 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 H3BT86 120 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 H7C2G1 150 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 SLC25A20O43772 301 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 NDUFC2O95298 119 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 TCL1BO95988 128 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 TRACP01848 142 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 CRPP02741 224 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 ACYP1P07311 99 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 RPL13AP40429 203 aaKnown RBP2.03□□□□□ -2.08
SPG11-225ENST00000561391 RPL28P46779 137 aaKnown RBP2.03□□□□□ -2.08
SPG11-225ENST00000561391 XCL1P47992 114 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 WFDC2Q14508 124 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 LYPD5Q6UWN5 251 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 Q6ZSA8 131 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 C5orf38Q86SI9 138 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 LINC00269Q8N2A0 174 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 ANKRD29Q8N6D5 301 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 CHCHD10Q8WYQ3 142 aaPredicted RBP2.03□□□□□ -2.08
SPG11-225ENST00000561391 SIGMAR1Q99720 223 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 NAA38Q9BRA0 125 aaKnown RBP2.03□□□□□ -2.08
SPG11-225ENST00000561391 SND1-IT1Q9HBX3 110 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 PRR34Q9NV39 138 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 TOMM7Q9P0U1 55 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 PRO0461Q9UI25 63 aa2.03□□□□□ -2.08
SPG11-225ENST00000561391 A0A096LPF7 62 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms