RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 NIPBLQ6KC79 2804 aaeCLIP-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 QSER1Q2KHR3 1735 aa-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 CEP290O15078 2479 aa-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 RGPD2P0DJD1 1756 aa-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 ACACAQ13085 2346 aa-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 LAMA3Q16787 3333 aa-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 PKD1L2Q7Z442 2459 aa-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 hADV29S1A0JD25 119 aa-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 H7BZZ5 65 aa-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 DLEU1O43261 78 aa-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 LELP1Q5T871 98 aa-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 APOBP04114 4563 aaKnown RBP-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 EPRSP07814 1512 aaKnown RBP-0.65□□□□□ -2.51
HMBOX1-216ENST00000561377 BIRC6Q9NR09 4857 aa-0.66□□□□□ -2.51
HMBOX1-216ENST00000561377 ABCA3Q99758 1704 aa-0.66□□□□□ -2.51
HMBOX1-216ENST00000561377 RYR1P21817 5038 aa-0.66□□□□□ -2.52
HMBOX1-216ENST00000561377 ATOX1O00244 68 aa-0.66□□□□□ -2.52
HMBOX1-216ENST00000561377 ASIPP42127 132 aa-0.66□□□□□ -2.52
HMBOX1-216ENST00000561377 ZNF720Q7Z2F6 126 aa-0.66□□□□□ -2.52
HMBOX1-216ENST00000561377 TRIOO75962 3097 aa-0.66□□□□□ -2.52
HMBOX1-216ENST00000561377 KIF20BQ96Q89 1820 aa-0.66□□□□□ -2.52
HMBOX1-216ENST00000561377 RELNP78509 3460 aa-0.66□□□□□ -2.52
HMBOX1-216ENST00000561377 FANCAO15360 1455 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 FYCO1Q9BQS8 1478 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 FAM186AA6NE01 2351 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 ALKQ9UM73 1620 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 ANKRD36A6QL64 1941 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 RYR3Q15413 4870 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 A0A1B0GV90 55 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 TMEM218A2RU14 115 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 S100A1P23297 94 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 COX7BP24311 80 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 ETDBQ3ZM63 59 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 TRGV9Q99603 122 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 PKD1L3Q7Z443 1732 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 CRYBG1Q9Y4K1 1723 aa-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 DSPP15924 2871 aaKnown RBP-0.67□□□□□ -2.52
HMBOX1-216ENST00000561377 DNAH1Q9P2D7 4330 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 RANBP2P49792 3224 aaKnown RBP-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 MAP3K1Q13233 1512 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 ZFYVE16Q7Z3T8 1539 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 D6R8Y8 96 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 GNGT2O14610 69 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 PLXNC1O60486 1568 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 C4AP0C0L4 1744 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 C4BP0C0L5 1744 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 IGLC2P0DOY2 106 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 IGLC3P0DOY3 106 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 NBEAL2Q6ZNJ1 2754 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 MUSTN1Q8IVN3 82 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 SERP2Q8N6R1 65 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 C2orf88Q9BSF0 95 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 GNG8Q9UK08 70 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 UBE2D4Q9Y2X8 147 aa-0.68□□□□□ -2.52
HMBOX1-216ENST00000561377 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.69□□□□□ -2.52
HMBOX1-216ENST00000561377 ANKRD36BQ8N2N9 1353 aa-0.69□□□□□ -2.52
HMBOX1-216ENST00000561377 TIAM2Q8IVF5 1701 aa-0.69□□□□□ -2.52
HMBOX1-216ENST00000561377 LEPROTL1O95214 131 aa-0.69□□□□□ -2.52
HMBOX1-216ENST00000561377 PMCHL2Q9BQD1 86 aa-0.69□□□□□ -2.52
HMBOX1-216ENST00000561377 NRXN1Q9ULB1 1477 aa-0.69□□□□□ -2.52
HMBOX1-216ENST00000561377 CLTCQ00610 1675 aaKnown RBP-0.69□□□□□ -2.52
HMBOX1-216ENST00000561377 LRRC7Q96NW7 1537 aa-0.69□□□□□ -2.52
HMBOX1-216ENST00000561377 DNAH7Q8WXX0 4024 aa-0.7□□□□□ -2.52
HMBOX1-216ENST00000561377 UQCRHLA0A096LP55 91 aa-0.7□□□□□ -2.52
HMBOX1-216ENST00000561377 C3orf79P0CE67 100 aa-0.7□□□□□ -2.52
HMBOX1-216ENST00000561377 MT1HP80294 61 aa-0.7□□□□□ -2.52
HMBOX1-216ENST00000561377 KIAA1109Q2LD37 5005 aa-0.7□□□□□ -2.52
HMBOX1-216ENST00000561377 PLECQ15149 4684 aaKnown RBP-0.7□□□□□ -2.52
HMBOX1-216ENST00000561377 A0A0C4DFX4 3053 aa-0.7□□□□□ -2.52
HMBOX1-216ENST00000561377 RNF213Q63HN8 5207 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 RIF1Q5UIP0 2472 aaKnown RBP-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 ATP7BP35670 1465 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 TEX14Q8IWB6 1497 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 A0A1B0GUT8 65 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 C20orf202A1L168 122 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 F8WEM9 126 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 K7EP34 96 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 NDUFA3O95167 84 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 LINC00032P0C843 101 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 SARNPP82979 210 aaKnown RBP-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 DEFA5Q01523 94 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 DEPDC5O75140 1603 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 UBR3Q6ZT12 1888 aa-0.71□□□□□ -2.52
HMBOX1-216ENST00000561377 ACACBO00763 2458 aa-0.72□□□□□ -2.52
HMBOX1-216ENST00000561377 C5orf42Q9H799 3197 aa-0.72□□□□□ -2.52
HMBOX1-216ENST00000561377 MAGI3Q5TCQ9 1506 aa-0.72□□□□□ -2.52
HMBOX1-216ENST00000561377 CMYA5Q8N3K9 4069 aa-0.72□□□□□ -2.52
HMBOX1-216ENST00000561377 CYB5AP00167 134 aa-0.72□□□□□ -2.52
HMBOX1-216ENST00000561377 PRLHP81277 87 aa-0.72□□□□□ -2.52
HMBOX1-216ENST00000561377 USP32Q8NFA0 1604 aa-0.72□□□□□ -2.52
HMBOX1-216ENST00000561377 WIZO95785 1651 aa-0.72□□□□□ -2.53
HMBOX1-216ENST00000561377 ATP10BO94823 1461 aa-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 NWD1Q149M9 1564 aa-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 NESP48681 1621 aa-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 SMIM11AP58511 58 aa-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 PLGLAQ15195 96 aa-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 COL5A1-AS1Q5SY13 56 aa-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 GAFA1Q96PS6 74 aa-0.73□□□□□ -2.53
HMBOX1-216ENST00000561377 PRO3102Q9H379 93 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms