RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 IGLV7-43P04211 117 aa5.94□□□□□ -1.46
TPM1-225ENST00000560679 PSMB2P49721 201 aa5.94□□□□□ -1.46
TPM1-225ENST00000560679 SYCNQ0VAF6 134 aa5.94□□□□□ -1.46
TPM1-225ENST00000560679 GAGE2BQ13066 116 aa5.94□□□□□ -1.46
TPM1-225ENST00000560679 C9orf116Q5BN46 136 aaPredicted RBP5.94□□□□□ -1.46
TPM1-225ENST00000560679 KRTAP11-1Q8IUC1 163 aa5.94□□□□□ -1.46
TPM1-225ENST00000560679 DIRC1Q969H9 104 aa5.94□□□□□ -1.46
TPM1-225ENST00000560679 PRO0461Q9UI25 63 aa5.94□□□□□ -1.46
TPM1-225ENST00000560679 A0A0U1RRA0 63 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 LOC107984640A0A0U1RRK4 108 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 H7C2G1 150 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 K7ERU9 68 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 COX7A2LO14548 114 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 TCL1BO95988 128 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 SCGB1C2P0DMR2 95 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 RPL13AP40429 203 aaKnown RBP5.93□□□□□ -1.46
TPM1-225ENST00000560679 CD164L2Q6UWJ8 174 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 SOSTDC1Q6X4U4 206 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 Q8IZM0 81 aa5.93□□□□□ -1.46
TPM1-225ENST00000560679 TRBV30A0A0K0K1B3 111 aa5.92□□□□□ -1.46
TPM1-225ENST00000560679 TRIAP1O43715 76 aa5.91□□□□□ -1.46
TPM1-225ENST00000560679 C6orf226Q5I0X4 101 aa5.91□□□□□ -1.46
TPM1-225ENST00000560679 ZNF561-AS1K7EIQ3 104 aa5.9□□□□□ -1.46
TPM1-225ENST00000560679 CXCL5P42830 114 aa5.9□□□□□ -1.46
TPM1-225ENST00000560679 LINC00158P58513 81 aa5.9□□□□□ -1.46
TPM1-225ENST00000560679 ATXN8Q156A1 80 aa5.9□□□□□ -1.46
TPM1-225ENST00000560679 MIR7-3HGQ8N6C7 128 aa5.9□□□□□ -1.46
TPM1-225ENST00000560679 COX6CP09669 75 aa5.89□□□□□ -1.47
TPM1-225ENST00000560679 MALP21145 153 aa5.89□□□□□ -1.47
TPM1-225ENST00000560679 SMCPP49901 116 aaPredicted RBP5.89□□□□□ -1.47
TPM1-225ENST00000560679 KIAA0087Q14695 138 aa5.89□□□□□ -1.47
TPM1-225ENST00000560679 MTURNQ8N3F0 131 aa5.89□□□□□ -1.47
TPM1-225ENST00000560679 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
TPM1-225ENST00000560679 M0QXV9 152 aa5.88□□□□□ -1.47
TPM1-225ENST00000560679 CKS1BP61024 79 aa5.88□□□□□ -1.47
TPM1-225ENST00000560679 RPL18AQ02543 176 aaKnown RBP5.88□□□□□ -1.47
TPM1-225ENST00000560679 RNF151Q2KHN1 245 aa5.88□□□□□ -1.47
TPM1-225ENST00000560679 ETDBQ3ZM63 59 aa5.88□□□□□ -1.47
TPM1-225ENST00000560679 LCE2DQ5TA82 110 aaPredicted RBP5.88□□□□□ -1.47
TPM1-225ENST00000560679 TRAV13-2A0A0B4J235 113 aa5.87□□□□□ -1.47
TPM1-225ENST00000560679 FAM168BA1KXE4 195 aa5.87□□□□□ -1.47
TPM1-225ENST00000560679 PFN2P35080 140 aa5.87□□□□□ -1.47
TPM1-225ENST00000560679 SND1-IT1Q9HBX3 110 aa5.87□□□□□ -1.47
TPM1-225ENST00000560679 C9JAW5 83 aa5.86□□□□□ -1.47
TPM1-225ENST00000560679 J3QR89 54 aa5.86□□□□□ -1.47
TPM1-225ENST00000560679 LST1O00453 97 aa5.86□□□□□ -1.47
TPM1-225ENST00000560679 SPAG11BQ08648 103 aa5.86□□□□□ -1.47
TPM1-225ENST00000560679 C2orf82Q6UX34 121 aa5.86□□□□□ -1.47
TPM1-225ENST00000560679 CAMK2N2Q96S95 79 aa5.86□□□□□ -1.47
TPM1-225ENST00000560679 SLC25A20O43772 301 aa5.85□□□□□ -1.47
TPM1-225ENST00000560679 COX17Q14061 63 aa5.85□□□□□ -1.47
TPM1-225ENST00000560679 TEN1Q86WV5 123 aa5.85□□□□□ -1.47
TPM1-225ENST00000560679 KRTAP7-1Q8IUC3 87 aa5.85□□□□□ -1.47
TPM1-225ENST00000560679 CLEC2BQ92478 149 aa5.85□□□□□ -1.47
TPM1-225ENST00000560679 VPS25Q9BRG1 176 aa5.85□□□□□ -1.47
TPM1-225ENST00000560679 CBY1Q9Y3M2 126 aa5.85□□□□□ -1.47
TPM1-225ENST00000560679 IGKV2-28A0A075B6P5 120 aa5.84□□□□□ -1.47
TPM1-225ENST00000560679 TRBV10-2A0A0K0K1G8 114 aa5.84□□□□□ -1.47
TPM1-225ENST00000560679 IGKV2D-28P01615 120 aa5.84□□□□□ -1.47
TPM1-225ENST00000560679 LINC00337Q8N6G1 96 aa5.84□□□□□ -1.47
TPM1-225ENST00000560679 PPDPFLQ8WWR9 84 aa5.84□□□□□ -1.47
TPM1-225ENST00000560679 C2orf48Q96LS8 159 aa5.84□□□□□ -1.47
TPM1-225ENST00000560679 H3BT86 120 aa5.83□□□□□ -1.48
TPM1-225ENST00000560679 RPL28P46779 137 aaKnown RBP5.83□□□□□ -1.48
TPM1-225ENST00000560679 FAM19A5Q7Z5A7 132 aaPredicted RBP5.83□□□□□ -1.48
TPM1-225ENST00000560679 ANKRD29Q8N6D5 301 aa5.83□□□□□ -1.48
TPM1-225ENST00000560679 A0A087X002 238 aa5.82□□□□□ -1.48
TPM1-225ENST00000560679 NDUFC2O95298 119 aa5.81□□□□□ -1.48
TPM1-225ENST00000560679 TRACP01848 142 aa5.81□□□□□ -1.48
TPM1-225ENST00000560679 UNQ6190/PRO20217Q6UXQ8 127 aa5.81□□□□□ -1.48
TPM1-225ENST00000560679 C10orf25Q5T742 122 aa5.8□□□□□ -1.48
TPM1-225ENST00000560679 RETNLBQ9BQ08 111 aa5.8□□□□□ -1.48
TPM1-225ENST00000560679 OR13C6PQ8NH95 151 aa5.79□□□□□ -1.48
TPM1-225ENST00000560679 SMIM11BQ8TCY0 68 aa5.79□□□□□ -1.48
TPM1-225ENST00000560679 F8WDY8 70 aa5.78□□□□□ -1.48
TPM1-225ENST00000560679 H0YGX0 51 aa5.78□□□□□ -1.48
TPM1-225ENST00000560679 TLX1NBP0CAT3 122 aa5.78□□□□□ -1.48
TPM1-225ENST00000560679 UBE2BP63146 152 aa5.78□□□□□ -1.48
TPM1-225ENST00000560679 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
TPM1-225ENST00000560679 C6orf48Q9UBA6 75 aa5.78□□□□□ -1.48
TPM1-225ENST00000560679 ZNF861PO60384 105 aa5.77□□□□□ -1.49
TPM1-225ENST00000560679 FAM218AQ96MZ4 157 aa5.77□□□□□ -1.49
TPM1-225ENST00000560679 CDIP1Q9H305 208 aa5.77□□□□□ -1.49
TPM1-225ENST00000560679 GAGE2EQ4V326 116 aa5.76□□□□□ -1.49
TPM1-225ENST00000560679 GAGE2DQ9UEU5 116 aa5.76□□□□□ -1.49
TPM1-225ENST00000560679 NCR3O14931 201 aa5.75□□□□□ -1.49
TPM1-225ENST00000560679 KRTAP13-2Q52LG2 175 aa5.75□□□□□ -1.49
TPM1-225ENST00000560679 C9orf129Q5T035 196 aaKnown RBP5.75□□□□□ -1.49
TPM1-225ENST00000560679 Q8NDZ9 215 aa5.75□□□□□ -1.49
TPM1-225ENST00000560679 TYMSOSQ8TAI1 123 aa5.75□□□□□ -1.49
TPM1-225ENST00000560679 TMEM126AQ9H061 195 aa5.75□□□□□ -1.49
TPM1-225ENST00000560679 TEX49A0A1B0GTD5 131 aa5.73□□□□□ -1.49
TPM1-225ENST00000560679 A0A1B0GX51 115 aa5.73□□□□□ -1.49
TPM1-225ENST00000560679 DNAL4O96015 105 aa5.73□□□□□ -1.49
TPM1-225ENST00000560679 BAALC-AS2P0C853 105 aa5.73□□□□□ -1.49
TPM1-225ENST00000560679 CRYGAP11844 174 aa5.73□□□□□ -1.49
TPM1-225ENST00000560679 S100A7L2Q5SY68 101 aa5.73□□□□□ -1.49
TPM1-225ENST00000560679 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
TPM1-225ENST00000560679 ANAPC11Q9NYG5 84 aa5.73□□□□□ -1.49
TPM1-225ENST00000560679 IGLV7-46A0A075B6I9 117 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms