RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 COX6B2Q6YFQ2 88 aa0.11□□□□□ -2.39
GABPB1-209ENST00000559100 TMEM131LA2VDJ0 1609 aa0.11□□□□□ -2.39
GABPB1-209ENST00000559100 MAP1BP46821 2468 aaKnown RBP0.11□□□□□ -2.39
GABPB1-209ENST00000559100 FLNAP21333 2647 aaKnown RBP0.11□□□□□ -2.39
GABPB1-209ENST00000559100 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.1□□□□□ -2.394e-7■■■■□ 26.6
GABPB1-209ENST00000559100 TRANK1O15050 2925 aa0.1□□□□□ -2.39
GABPB1-209ENST00000559100 IFI6P09912 130 aa0.1□□□□□ -2.39
GABPB1-209ENST00000559100 SPRR2DP22532 72 aa0.1□□□□□ -2.39
GABPB1-209ENST00000559100 HSPG2P98160 4391 aa0.1□□□□□ -2.39
GABPB1-209ENST00000559100 PREX1Q8TCU6 1659 aa0.1□□□□□ -2.39
GABPB1-209ENST00000559100 ERVK-7P63135 1459 aa0.1□□□□□ -2.39
GABPB1-209ENST00000559100 LTN1O94822 1766 aa0.09□□□□□ -2.39
GABPB1-209ENST00000559100 LPAP08519 4548 aa0.09□□□□□ -2.39
GABPB1-209ENST00000559100 BVES-AS1Q5T3Y7 98 aa0.09□□□□□ -2.4
GABPB1-209ENST00000559100 MYCBP2O75592 4640 aa0.09□□□□□ -2.4
GABPB1-209ENST00000559100 TNXBP22105 4242 aa0.09□□□□□ -2.4
GABPB1-209ENST00000559100 USP32Q8NFA0 1604 aa0.09□□□□□ -2.4
GABPB1-209ENST00000559100 RGPD8O14715 1765 aaPredicted RBP0.09□□□□□ -2.4
GABPB1-209ENST00000559100 RGPD5Q99666 1765 aa0.09□□□□□ -2.4
GABPB1-209ENST00000559100 EP300Q09472 2414 aaPredicted RBP0.08□□□□□ -2.4
GABPB1-209ENST00000559100 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.08□□□□□ -2.4
GABPB1-209ENST00000559100 DCAF1Q9Y4B6 1507 aa0.08□□□□□ -2.4
GABPB1-209ENST00000559100 HECTD4Q9Y4D8 3996 aa0.08□□□□□ -2.4
GABPB1-209ENST00000559100 H0YGG7 62 aa0.08□□□□□ -2.4
GABPB1-209ENST00000559100 NREPQ16612 68 aa0.08□□□□□ -2.4
GABPB1-209ENST00000559100 PRO3102Q9H379 93 aa0.08□□□□□ -2.4
GABPB1-209ENST00000559100 PIK3C2BO00750 1634 aa0.08□□□□□ -2.4
GABPB1-209ENST00000559100 ARHGAP35Q9NRY4 1499 aa0.08□□□□□ -2.4
GABPB1-209ENST00000559100 WNK1Q9H4A3 2382 aa0.08□□□□□ -2.4
GABPB1-209ENST00000559100 POLR1AO95602 1720 aaPredicted RBP0.07□□□□□ -2.4
GABPB1-209ENST00000559100 NDUFA4O00483 81 aa0.07□□□□□ -2.4
GABPB1-209ENST00000559100 DEFB121Q5J5C9 76 aa0.07□□□□□ -2.4
GABPB1-209ENST00000559100 HMCN2Q8NDA2 5059 aa0.07□□□□□ -2.4
GABPB1-209ENST00000559100 ABCC1P33527 1531 aa0.07□□□□□ -2.4
GABPB1-209ENST00000559100 TIAM2Q8IVF5 1701 aa0.07□□□□□ -2.4
GABPB1-209ENST00000559100 DIP2BQ9P265 1576 aa0.06□□□□□ -2.4
GABPB1-209ENST00000559100 ALMS1Q8TCU4 4167 aa0.06□□□□□ -2.4
GABPB1-209ENST00000559100 PRKDCP78527 4128 aaKnown RBP0.06□□□□□ -2.4
GABPB1-209ENST00000559100 C3orf79P0CE67 100 aa0.06□□□□□ -2.4
GABPB1-209ENST00000559100 LINC00158P58513 81 aa0.06□□□□□ -2.4
GABPB1-209ENST00000559100 DEFA5Q01523 94 aa0.06□□□□□ -2.4
GABPB1-209ENST00000559100 C18orf32Q8TCD1 76 aa0.06□□□□□ -2.4
GABPB1-209ENST00000559100 KDM5DQ9BY66 1539 aa0.06□□□□□ -2.4
GABPB1-209ENST00000559100 APC2O95996 2303 aa0.05□□□□□ -2.4
GABPB1-209ENST00000559100 FLNBO75369 2602 aaKnown RBP0.05□□□□□ -2.4
GABPB1-209ENST00000559100 TNRC6CQ9HCJ0 1690 aaKnown RBP0.05□□□□□ -2.4
GABPB1-209ENST00000559100 DOT1LQ8TEK3 1739 aa0.05□□□□□ -2.4
GABPB1-209ENST00000559100 H3BVH4 76 aa0.05□□□□□ -2.4
GABPB1-209ENST00000559100 NWD1Q149M9 1564 aa0.05□□□□□ -2.4
GABPB1-209ENST00000559100 CNOT1A5YKK6 2376 aaKnown RBP0.04□□□□□ -2.4
GABPB1-209ENST00000559100 MAGI3Q5TCQ9 1506 aa0.04□□□□□ -2.4
GABPB1-209ENST00000559100 AKAP13Q12802 2813 aa0.04□□□□□ -2.4
GABPB1-209ENST00000559100 ZNF831Q5JPB2 1677 aa0.04□□□□□ -2.4
GABPB1-209ENST00000559100 ZANQ9Y493 2812 aa0.04□□□□□ -2.4
GABPB1-209ENST00000559100 ARFGEF2Q9Y6D5 1785 aa0.04□□□□□ -2.4
GABPB1-209ENST00000559100 RRBP1Q9P2E9 1410 aaKnown RBP0.04□□□□□ -2.4
GABPB1-209ENST00000559100 CEP170BQ9Y4F5 1589 aaPredicted RBP0.03□□□□□ -2.4
GABPB1-209ENST00000559100 TENM2Q9NT68 2774 aa0.03□□□□□ -2.4
GABPB1-209ENST00000559100 HMGA1P17096 107 aaKnown RBP0.03□□□□□ -2.4
GABPB1-209ENST00000559100 KNL1Q8NG31 2342 aa0.03□□□□□ -2.41
GABPB1-209ENST00000559100 MAP1AP78559 2803 aaPredicted RBP0.03□□□□□ -2.41
GABPB1-209ENST00000559100 ANKARQ7Z5J8 1434 aa0.03□□□□□ -2.41
GABPB1-209ENST00000559100 PRRC2CQ9Y520 2896 aaKnown RBP0.03□□□□□ -2.41
GABPB1-209ENST00000559100 ACANP16112 2415 aa0.03□□□□□ -2.41
GABPB1-209ENST00000559100 CCDC88BA6NC98 1476 aa0.03□□□□□ -2.41
GABPB1-209ENST00000559100 GPR98Q8WXG9 6306 aa0.02□□□□□ -2.41
GABPB1-209ENST00000559100 COL6A3P12111 3177 aa0.02□□□□□ -2.41
GABPB1-209ENST00000559100 NESP48681 1621 aa0.02□□□□□ -2.41
GABPB1-209ENST00000559100 C4AP0C0L4 1744 aa0.01□□□□□ -2.41
GABPB1-209ENST00000559100 C4BP0C0L5 1744 aa0.01□□□□□ -2.41
GABPB1-209ENST00000559100 SPRR2BP35325 72 aa0.01□□□□□ -2.41
GABPB1-209ENST00000559100 CFAP74Q9C0B2 1584 aa0.01□□□□□ -2.41
GABPB1-209ENST00000559100 CICQ96RK0 1608 aaPredicted RBP0.01□□□□□ -2.41
GABPB1-209ENST00000559100 LCE6AA0A183 80 aa0□□□□□ -2.41
GABPB1-209ENST00000559100 MRPL33O75394 65 aaKnown RBP0□□□□□ -2.41
GABPB1-209ENST00000559100 LRP2P98164 4655 aa0□□□□□ -2.41
GABPB1-209ENST00000559100 PDE4DIPQ5VU43 2346 aa0□□□□□ -2.41
GABPB1-209ENST00000559100 CFAP43Q8NDM7 1665 aa-0.01□□□□□ -2.41
GABPB1-209ENST00000559100 SCRIBQ14160 1630 aa-0.01□□□□□ -2.41
GABPB1-209ENST00000559100 MAP3K1Q13233 1512 aa-0.01□□□□□ -2.41
GABPB1-209ENST00000559100 NBEAL1Q6ZS30 2694 aa-0.01□□□□□ -2.41
GABPB1-209ENST00000559100 HECTD1Q9ULT8 2610 aa-0.01□□□□□ -2.41
GABPB1-209ENST00000559100 ENHOQ6UWT2 76 aa-0.01□□□□□ -2.41
GABPB1-209ENST00000559100 UBL5Q9BZL1 73 aa-0.01□□□□□ -2.41
GABPB1-209ENST00000559100 PCNX1Q96RV3 2341 aa-0.01□□□□□ -2.41
GABPB1-209ENST00000559100 SCN11AQ9UI33 1791 aa-0.01□□□□□ -2.41
GABPB1-209ENST00000559100 PLCH1Q4KWH8 1693 aa-0.02□□□□□ -2.41
GABPB1-209ENST00000559100 RALGAPBQ86X10 1494 aa-0.02□□□□□ -2.41
GABPB1-209ENST00000559100 HFM1A2PYH4 1435 aa-0.02□□□□□ -2.41
GABPB1-209ENST00000559100 ANKRD50Q9ULJ7 1429 aa-0.02□□□□□ -2.41
GABPB1-209ENST00000559100 SMCO4Q9NRQ5 59 aa-0.02□□□□□ -2.41
GABPB1-209ENST00000559100 GNG13Q9P2W3 67 aa-0.02□□□□□ -2.41
GABPB1-209ENST00000559100 DDX60LQ5H9U9 1706 aaKnown RBP-0.02□□□□□ -2.41
GABPB1-209ENST00000559100 RICTORQ6R327 1708 aa-0.02□□□□□ -2.41
GABPB1-209ENST00000559100 STAB1Q9NY15 2570 aa-0.02□□□□□ -2.41
GABPB1-209ENST00000559100 DEFB131BA0A096LNP1 70 aa-0.03□□□□□ -2.41
GABPB1-209ENST00000559100 H0YAA0 97 aa-0.03□□□□□ -2.41
GABPB1-209ENST00000559100 PDCD5O14737 125 aa-0.03□□□□□ -2.41
GABPB1-209ENST00000559100 PTPN23Q9H3S7 1636 aa-0.03□□□□□ -2.41
GABPB1-209ENST00000559100 ADAMTS12P58397 1594 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms