RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 UBE2BP63146 152 aa6.26□□□□□ -1.41
SHMT2-224ENST00000556737 Q1RN00 199 aa6.26□□□□□ -1.41
SHMT2-224ENST00000556737 OR13C6PQ8NH95 151 aa6.26□□□□□ -1.41
SHMT2-224ENST00000556737 H7C2G1 150 aa6.25□□□□□ -1.41
SHMT2-224ENST00000556737 DIRC1Q969H9 104 aa6.25□□□□□ -1.41
SHMT2-224ENST00000556737 C22orf24Q9Y442 160 aa6.25□□□□□ -1.41
SHMT2-224ENST00000556737 KRTAP1-4P0C5Y4 121 aa6.24□□□□□ -1.41
SHMT2-224ENST00000556737 COL5A1-AS1Q5SY13 56 aa6.24□□□□□ -1.41
SHMT2-224ENST00000556737 NKAPP1Q8N9T2 125 aa6.24□□□□□ -1.41
SHMT2-224ENST00000556737 CFC1BP0CG36 223 aa6.23□□□□□ -1.41
SHMT2-224ENST00000556737 CFC1P0CG37 223 aa6.23□□□□□ -1.41
SHMT2-224ENST00000556737 RPL13AP40429 203 aaKnown RBP6.23□□□□□ -1.41
SHMT2-224ENST00000556737 S100A7L2Q5SY68 101 aa6.23□□□□□ -1.41
SHMT2-224ENST00000556737 IGLV5-37A0A075B6J1 123 aa6.22□□□□□ -1.41
SHMT2-224ENST00000556737 TRAV13-2A0A0B4J235 113 aa6.22□□□□□ -1.41
SHMT2-224ENST00000556737 A0A0B4J2C4 111 aa6.22□□□□□ -1.41
SHMT2-224ENST00000556737 NDUFC2O95298 119 aa6.22□□□□□ -1.41
SHMT2-224ENST00000556737 MRPL55Q7Z7F7 128 aaKnown RBP6.22□□□□□ -1.41
SHMT2-224ENST00000556737 PPDPFQ9H3Y8 114 aa6.22□□□□□ -1.41
SHMT2-224ENST00000556737 PRO1854Q9UHT4 67 aa6.22□□□□□ -1.41
SHMT2-224ENST00000556737 RNF213Q63HN8 5207 aa6.22□□□□□ -1.41
SHMT2-224ENST00000556737 LOC107984156A0A0G2JMH3 177 aa6.21□□□□□ -1.42
SHMT2-224ENST00000556737 GAGE10A6NGK3 116 aa6.21□□□□□ -1.42
SHMT2-224ENST00000556737 ARL17AQ8IVW1 177 aa6.21□□□□□ -1.42
SHMT2-224ENST00000556737 PRR26Q8N8Z3 221 aa6.21□□□□□ -1.42
SHMT2-224ENST00000556737 IGKV2-28A0A075B6P5 120 aa6.2□□□□□ -1.42
SHMT2-224ENST00000556737 IGKV2D-28P01615 120 aa6.2□□□□□ -1.42
SHMT2-224ENST00000556737 VPREB1P12018 145 aa6.2□□□□□ -1.42
SHMT2-224ENST00000556737 PSMB2P49721 201 aa6.2□□□□□ -1.42
SHMT2-224ENST00000556737 LBHQ53QV2 105 aaPredicted RBP6.2□□□□□ -1.42
SHMT2-224ENST00000556737 Q8NDZ9 215 aa6.2□□□□□ -1.42
SHMT2-224ENST00000556737 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
SHMT2-224ENST00000556737 A0A1B0GWB2 263 aa6.19□□□□□ -1.42
SHMT2-224ENST00000556737 M0R378 163 aa6.19□□□□□ -1.42
SHMT2-224ENST00000556737 ZNF861PO60384 105 aa6.19□□□□□ -1.42
SHMT2-224ENST00000556737 LINC00337Q8N6G1 96 aa6.19□□□□□ -1.42
SHMT2-224ENST00000556737 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
SHMT2-224ENST00000556737 TRBV10-2A0A0K0K1G8 114 aa6.18□□□□□ -1.42
SHMT2-224ENST00000556737 RPL37AP8A6NKH3 93 aa6.18□□□□□ -1.42
SHMT2-224ENST00000556737 H3BUT2 72 aa6.18□□□□□ -1.42
SHMT2-224ENST00000556737 TAX1BP3O14907 124 aa6.18□□□□□ -1.42
SHMT2-224ENST00000556737 TSPAN13O95857 204 aa6.18□□□□□ -1.42
SHMT2-224ENST00000556737 TMEM126AQ9H061 195 aa6.18□□□□□ -1.42
SHMT2-224ENST00000556737 IGLV1-50A0A075B6I6 118 aa6.17□□□□□ -1.42
SHMT2-224ENST00000556737 BCE1O60756 84 aa6.17□□□□□ -1.42
SHMT2-224ENST00000556737 SCGB1C2P0DMR2 95 aa6.17□□□□□ -1.42
SHMT2-224ENST00000556737 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
SHMT2-224ENST00000556737 TRBV10-3A0A0K0K1G6 114 aa6.16□□□□□ -1.42
SHMT2-224ENST00000556737 C9orf118A6NHY6 69 aa6.16□□□□□ -1.42
SHMT2-224ENST00000556737 LPAP08519 4548 aa6.16□□□□□ -1.42
SHMT2-224ENST00000556737 TRAV23DV6A0A075B6W5 121 aa6.15□□□□□ -1.42
SHMT2-224ENST00000556737 COX6CP09669 75 aa6.15□□□□□ -1.42
SHMT2-224ENST00000556737 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
SHMT2-224ENST00000556737 CBY1Q9Y3M2 126 aa6.15□□□□□ -1.42
SHMT2-224ENST00000556737 FABP2P12104 132 aa6.14□□□□□ -1.43
SHMT2-224ENST00000556737 RPL28P46779 137 aaKnown RBP6.14□□□□□ -1.43
SHMT2-224ENST00000556737 LYRM7Q5U5X0 104 aa6.14□□□□□ -1.43
SHMT2-224ENST00000556737 TRIAP1O43715 76 aa6.13□□□□□ -1.43
SHMT2-224ENST00000556737 IGLV6-57P01721 117 aa6.13□□□□□ -1.43
SHMT2-224ENST00000556737 VAMP3Q15836 100 aa6.13□□□□□ -1.43
SHMT2-224ENST00000556737 A0A087X002 238 aa6.12□□□□□ -1.43
SHMT2-224ENST00000556737 A0A1W2PPM0 123 aa6.12□□□□□ -1.43
SHMT2-224ENST00000556737 A0A1B0GV90 55 aa6.11□□□□□ -1.43
SHMT2-224ENST00000556737 PRYO14603 147 aa6.11□□□□□ -1.43
SHMT2-224ENST00000556737 ZNF73O43830 326 aaPredicted RBP6.11□□□□□ -1.43
SHMT2-224ENST00000556737 UBE2AP49459 152 aa6.11□□□□□ -1.43
SHMT2-224ENST00000556737 C6orf99Q4VX62 202 aa6.11□□□□□ -1.43
SHMT2-224ENST00000556737 ETDCA0A1B0GVM5 59 aa6.1□□□□□ -1.43
SHMT2-224ENST00000556737 PRLHP81277 87 aa6.1□□□□□ -1.43
SHMT2-224ENST00000556737 FAM19A1Q7Z5A9 133 aa6.1□□□□□ -1.43
SHMT2-224ENST00000556737 SPCS1Q9Y6A9 102 aa6.1□□□□□ -1.43
SHMT2-224ENST00000556737 COX7BP24311 80 aa6.09□□□□□ -1.43
SHMT2-224ENST00000556737 CLEC2BQ92478 149 aa6.09□□□□□ -1.43
SHMT2-224ENST00000556737 H0YGX0 51 aa6.08□□□□□ -1.44
SHMT2-224ENST00000556737 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
SHMT2-224ENST00000556737 KCNQ1DNQ9H478 68 aa6.08□□□□□ -1.44
SHMT2-224ENST00000556737 ANAPC11Q9NYG5 84 aa6.08□□□□□ -1.44
SHMT2-224ENST00000556737 SLC25A20O43772 301 aa6.07□□□□□ -1.44
SHMT2-224ENST00000556737 SNCGO76070 127 aa6.07□□□□□ -1.44
SHMT2-224ENST00000556737 ATXN8Q156A1 80 aa6.07□□□□□ -1.44
SHMT2-224ENST00000556737 GTF2H5Q6ZYL4 71 aa6.07□□□□□ -1.44
SHMT2-224ENST00000556737 K7EP34 96 aa6.06□□□□□ -1.44
SHMT2-224ENST00000556737 TCL1BO95988 128 aa6.06□□□□□ -1.44
SHMT2-224ENST00000556737 CRYGAP11844 174 aa6.06□□□□□ -1.44
SHMT2-224ENST00000556737 TRBV20-1A0A075B6N2 111 aa6.05□□□□□ -1.44
SHMT2-224ENST00000556737 DNAL4O96015 105 aa6.05□□□□□ -1.44
SHMT2-224ENST00000556737 FAM229BQ4G0N7 80 aa6.05□□□□□ -1.44
SHMT2-224ENST00000556737 TRBV7-6A0A0J9YX20 115 aa6.04□□□□□ -1.44
SHMT2-224ENST00000556737 SPRR1AP35321 89 aa6.04□□□□□ -1.44
SHMT2-224ENST00000556737 ELOF1P60002 83 aaKnown RBP6.04□□□□□ -1.44
SHMT2-224ENST00000556737 TYMSOSQ8TAI1 123 aa6.04□□□□□ -1.44
SHMT2-224ENST00000556737 FAM218AQ96MZ4 157 aa6.04□□□□□ -1.44
SHMT2-224ENST00000556737 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
SHMT2-224ENST00000556737 KRTAP4-16G5E9R7 235 aaPredicted RBP6.03□□□□□ -1.44
SHMT2-224ENST00000556737 H3BMG7 143 aa6.03□□□□□ -1.44
SHMT2-224ENST00000556737 LST1O00453 97 aa6.03□□□□□ -1.44
SHMT2-224ENST00000556737 hADV29S1A0JD25 119 aa6.02□□□□□ -1.45
SHMT2-224ENST00000556737 B5MCH6 92 aa6.02□□□□□ -1.45
SHMT2-224ENST00000556737 LINC00575Q6W349 94 aa6.02□□□□□ -1.45
SHMT2-224ENST00000556737 Q6ZRX8 168 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms