RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	DNMBP	Q6XZF7	1577 aa		0.6	□□□□□ -2.31
KTN1-223	ENST00000555573	ZFYVE26	Q68DK2	2539 aa		0.6	□□□□□ -2.31
KTN1-223	ENST00000555573	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.6	□□□□□ -2.31	1e-8	■□□□□ 8.4
KTN1-223	ENST00000555573	KMT2D	O14686	5537 aa		0.6	□□□□□ -2.31
KTN1-223	ENST00000555573	DEFA5	Q01523	94 aa		0.6	□□□□□ -2.31
KTN1-223	ENST00000555573	NREP	Q16612	68 aa		0.6	□□□□□ -2.31
KTN1-223	ENST00000555573	PARP4	Q9UKK3	1724 aa	Known RBP	0.6	□□□□□ -2.31
KTN1-223	ENST00000555573	EIF2AK4	Q9P2K8	1649 aa	Known RBP	0.59	□□□□□ -2.31
KTN1-223	ENST00000555573	KLK9	Q2XQG4	91 aa		0.59	□□□□□ -2.31
KTN1-223	ENST00000555573	KRTAP21-1	Q3LI58	79 aa		0.59	□□□□□ -2.31
KTN1-223	ENST00000555573	ZC3H13	Q5T200	1668 aa	Known RBP	0.59	□□□□□ -2.31
KTN1-223	ENST00000555573	USP24	Q9UPU5	2620 aa		0.59	□□□□□ -2.32
KTN1-223	ENST00000555573	PDCD5	O14737	125 aa		0.58	□□□□□ -2.32
KTN1-223	ENST00000555573	HEPN1	Q6WQI6	88 aa		0.58	□□□□□ -2.32
KTN1-223	ENST00000555573	WIZ	O95785	1651 aa		0.58	□□□□□ -2.32
KTN1-223	ENST00000555573	DDX60L	Q5H9U9	1706 aa	Known RBP	0.58	□□□□□ -2.32
KTN1-223	ENST00000555573	H1FX-AS1	Q4G0G2	97 aa		0.58	□□□□□ -2.32
KTN1-223	ENST00000555573	CD163L1	Q9NR16	1453 aa		0.58	□□□□□ -2.32
KTN1-223	ENST00000555573	NAV2	Q8IVL1	2488 aa		0.57	□□□□□ -2.32
KTN1-223	ENST00000555573	CIC	Q96RK0	1608 aa	Predicted RBP	0.57	□□□□□ -2.32
KTN1-223	ENST00000555573	ITSN1	Q15811	1721 aa		0.57	□□□□□ -2.32
KTN1-223	ENST00000555573	CHD6	Q8TD26	2715 aa		0.57	□□□□□ -2.32
KTN1-223	ENST00000555573	SPINK4	O60575	86 aa		0.57	□□□□□ -2.32
KTN1-223	ENST00000555573	LMTK2	Q8IWU2	1503 aa		0.57	□□□□□ -2.32
KTN1-223	ENST00000555573	ADAMTS12	P58397	1594 aa		0.57	□□□□□ -2.32
KTN1-223	ENST00000555573	C4A	P0C0L4	1744 aa		0.57	□□□□□ -2.32
KTN1-223	ENST00000555573	C4B	P0C0L5	1744 aa		0.57	□□□□□ -2.32
KTN1-223	ENST00000555573	CNOT1	A5YKK6	2376 aa	Known RBP	0.56	□□□□□ -2.32
KTN1-223	ENST00000555573	DUOX2	Q9NRD8	1548 aa		0.56	□□□□□ -2.32
KTN1-223	ENST00000555573		H3BVH4	76 aa		0.56	□□□□□ -2.32
KTN1-223	ENST00000555573		U3KQA8	63 aa		0.56	□□□□□ -2.32
KTN1-223	ENST00000555573	MUC2	Q02817	5179 aa		0.56	□□□□□ -2.32
KTN1-223	ENST00000555573	UBR4	Q5T4S7	5183 aa		0.56	□□□□□ -2.32
KTN1-223	ENST00000555573	LELP1	Q5T871	98 aa		0.55	□□□□□ -2.32
KTN1-223	ENST00000555573	NDUFA4	O00483	81 aa		0.55	□□□□□ -2.32
KTN1-223	ENST00000555573	NRAP	Q86VF7	1730 aa		0.55	□□□□□ -2.32
KTN1-223	ENST00000555573	VWF	P04275	2813 aa		0.54	□□□□□ -2.32
KTN1-223	ENST00000555573	ANKRD50	Q9ULJ7	1429 aa		0.54	□□□□□ -2.32
KTN1-223	ENST00000555573	LCE6A	A0A183	80 aa		0.54	□□□□□ -2.32
KTN1-223	ENST00000555573	ABCA9	Q8IUA7	1624 aa		0.54	□□□□□ -2.32
KTN1-223	ENST00000555573	MROH1	Q8NDA8	1641 aa		0.54	□□□□□ -2.32
KTN1-223	ENST00000555573	CDC42BPG	Q6DT37	1551 aa		0.54	□□□□□ -2.32
KTN1-223	ENST00000555573	CDKN2A-AS1	Q9UH64	79 aa		0.53	□□□□□ -2.32
KTN1-223	ENST00000555573	NCOR1	O75376	2440 aa		0.53	□□□□□ -2.32
KTN1-223	ENST00000555573	HMGA1	P17096	107 aa	Known RBP	0.52	□□□□□ -2.33
KTN1-223	ENST00000555573	ATR	Q13535	2644 aa		0.52	□□□□□ -2.33
KTN1-223	ENST00000555573	CELSR1	Q9NYQ6	3014 aa		0.52	□□□□□ -2.33
KTN1-223	ENST00000555573	TENM4	Q6N022	2769 aa		0.51	□□□□□ -2.33
KTN1-223	ENST00000555573	COX6B2	Q6YFQ2	88 aa		0.51	□□□□□ -2.33
KTN1-223	ENST00000555573	HILPDA	Q9Y5L2	63 aa		0.51	□□□□□ -2.33
KTN1-223	ENST00000555573	TJP1	Q07157	1748 aa		0.51	□□□□□ -2.33
KTN1-223	ENST00000555573	ASXL1	Q8IXJ9	1541 aa		0.51	□□□□□ -2.33
KTN1-223	ENST00000555573	WNK2	Q9Y3S1	2297 aa		0.51	□□□□□ -2.33
KTN1-223	ENST00000555573	MADD	Q8WXG6	1647 aa		0.5	□□□□□ -2.33
KTN1-223	ENST00000555573	KIAA1109	Q2LD37	5005 aa		0.5	□□□□□ -2.33
KTN1-223	ENST00000555573	NDUFA3	O95167	84 aa		0.5	□□□□□ -2.33
KTN1-223	ENST00000555573	SYNE1	Q8NF91	8797 aa	Known RBP	0.5	□□□□□ -2.33
KTN1-223	ENST00000555573	NHS	Q6T4R5	1651 aa		0.5	□□□□□ -2.33
KTN1-223	ENST00000555573	CSPG4	Q6UVK1	2322 aa		0.5	□□□□□ -2.33
KTN1-223	ENST00000555573	WFDC13	Q8IUB5	93 aa		0.5	□□□□□ -2.33
KTN1-223	ENST00000555573	SPTA1	P02549	2419 aa		0.49	□□□□□ -2.33
KTN1-223	ENST00000555573	HFM1	A2PYH4	1435 aa		0.49	□□□□□ -2.33
KTN1-223	ENST00000555573	PHGR1	C9JFL3	82 aa		0.49	□□□□□ -2.33
KTN1-223	ENST00000555573	RALGAPB	Q86X10	1494 aa		0.49	□□□□□ -2.33
KTN1-223	ENST00000555573	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.49	□□□□□ -2.33
KTN1-223	ENST00000555573	LOC730098	B7Z3J9	87 aa		0.48	□□□□□ -2.33
KTN1-223	ENST00000555573	DIP2A	Q14689	1571 aa		0.48	□□□□□ -2.33
KTN1-223	ENST00000555573	EFCAB5	A4FU69	1503 aa		0.48	□□□□□ -2.33
KTN1-223	ENST00000555573	CCDC180	Q9P1Z9	1646 aa		0.48	□□□□□ -2.33
KTN1-223	ENST00000555573	ATXN8	Q156A1	80 aa		0.47	□□□□□ -2.33
KTN1-223	ENST00000555573	GNG13	Q9P2W3	67 aa		0.47	□□□□□ -2.33
KTN1-223	ENST00000555573	INO80	Q9ULG1	1556 aa	Predicted RBP	0.47	□□□□□ -2.33
KTN1-223	ENST00000555573	NCOR2	Q9Y618	2525 aa		0.47	□□□□□ -2.33
KTN1-223	ENST00000555573	PKD1L1	Q8TDX9	2849 aa		0.46	□□□□□ -2.34
KTN1-223	ENST00000555573	UBR5	O95071	2799 aa	Predicted RBP	0.46	□□□□□ -2.34
KTN1-223	ENST00000555573	RNF17	Q9BXT8	1623 aa	Known RBP	0.46	□□□□□ -2.34
KTN1-223	ENST00000555573	PTPN13	Q12923	2485 aa		0.46	□□□□□ -2.34
KTN1-223	ENST00000555573	KNL1	Q8NG31	2342 aa		0.45	□□□□□ -2.34
KTN1-223	ENST00000555573	ENHO	Q6UWT2	76 aa		0.45	□□□□□ -2.34
KTN1-223	ENST00000555573	SSPO	A2VEC9	5147 aa		0.45	□□□□□ -2.34
KTN1-223	ENST00000555573	TRANK1	O15050	2925 aa		0.44	□□□□□ -2.34
KTN1-223	ENST00000555573	LRP1	Q07954	4544 aa	Known RBP	0.44	□□□□□ -2.34
KTN1-223	ENST00000555573	PRO3102	Q9H379	93 aa		0.44	□□□□□ -2.34
KTN1-223	ENST00000555573	THOC2	Q8NI27	1593 aa	Known RBP	0.44	□□□□□ -2.34
KTN1-223	ENST00000555573	PKD1L2	Q7Z442	2459 aa		0.44	□□□□□ -2.34
KTN1-223	ENST00000555573	PLXNC1	O60486	1568 aa		0.44	□□□□□ -2.34
KTN1-223	ENST00000555573	UBL5	Q9BZL1	73 aa		0.44	□□□□□ -2.34
KTN1-223	ENST00000555573	ABCA2	Q9BZC7	2435 aa		0.43	□□□□□ -2.34
KTN1-223	ENST00000555573	KMT2C	Q8NEZ4	4911 aa	Known RBP	0.43	□□□□□ -2.34
KTN1-223	ENST00000555573	BSN	Q9UPA5	3926 aa		0.43	□□□□□ -2.34
KTN1-223	ENST00000555573	ERICH3	Q5RHP9	1530 aa		0.43	□□□□□ -2.34
KTN1-223	ENST00000555573	C3orf79	P0CE67	100 aa		0.42	□□□□□ -2.34
KTN1-223	ENST00000555573	LINC00158	P58513	81 aa		0.42	□□□□□ -2.34
KTN1-223	ENST00000555573	DEPDC5	O75140	1603 aa		0.42	□□□□□ -2.34
KTN1-223	ENST00000555573	FAT2	Q9NYQ8	4349 aa		0.42	□□□□□ -2.34
KTN1-223	ENST00000555573	HIVEP3	Q5T1R4	2406 aa		0.42	□□□□□ -2.34
KTN1-223	ENST00000555573	SMIM31	A0A1B0GVY4	71 aa		0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	MRPL33	O75394	65 aa	Known RBP	0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	KCNQ1DN	Q9H478	68 aa		0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	MAST4	O15021	2626 aa		0.41	□□□□□ -2.34

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