RNA–Protein interactions for RNA: ENST00000553696.1

NEMF-202, Transcript of nuclear export mediator factor, humanhuman

TSL 3

Gene NEMF, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-202ENST00000553696 RGPD1P0DJD0 1748 aa-0.1□□□□□ -2.43
NEMF-202ENST00000553696 QSER1Q2KHR3 1735 aa-0.1□□□□□ -2.43
NEMF-202ENST00000553696 FLNBO75369 2602 aaKnown RBP-0.11□□□□□ -2.43
NEMF-202ENST00000553696 ABCC3O15438 1527 aa-0.11□□□□□ -2.43
NEMF-202ENST00000553696 STAB1Q9NY15 2570 aa-0.11□□□□□ -2.43
NEMF-202ENST00000553696 UMAD1C9J7I0 102 aa-0.11□□□□□ -2.43
NEMF-202ENST00000553696 TDRG1Q3Y452 100 aa-0.11□□□□□ -2.43
NEMF-202ENST00000553696 LELP1Q5T871 98 aa-0.11□□□□□ -2.43
NEMF-202ENST00000553696 PRO3102Q9H379 93 aa-0.11□□□□□ -2.43
NEMF-202ENST00000553696 ST20Q9HBF5 79 aa-0.11□□□□□ -2.43
NEMF-202ENST00000553696 ACANP16112 2415 aa-0.11□□□□□ -2.43
NEMF-202ENST00000553696 ZANQ9Y493 2812 aa-0.12□□□□□ -2.43
NEMF-202ENST00000553696 TMEM131LA2VDJ0 1609 aa-0.12□□□□□ -2.43
NEMF-202ENST00000553696 ATP5EP2Q5VTU8 51 aa-0.12□□□□□ -2.43
NEMF-202ENST00000553696 PPLO60437 1756 aa-0.12□□□□□ -2.43
NEMF-202ENST00000553696 RGPD2P0DJD1 1756 aa-0.12□□□□□ -2.43
NEMF-202ENST00000553696 UBR3Q6ZT12 1888 aa-0.12□□□□□ -2.43
NEMF-202ENST00000553696 URB2Q14146 1524 aaKnown RBP-0.13□□□□□ -2.43
NEMF-202ENST00000553696 LRRC7Q96NW7 1537 aa-0.13□□□□□ -2.43
NEMF-202ENST00000553696 CNOT1A5YKK6 2376 aaKnown RBP-0.13□□□□□ -2.43
NEMF-202ENST00000553696 BCORQ6W2J9 1755 aa-0.13□□□□□ -2.43
NEMF-202ENST00000553696 A0A087WXM4 84 aa-0.13□□□□□ -2.43
NEMF-202ENST00000553696 SPRR2AP35326 72 aa-0.13□□□□□ -2.43
NEMF-202ENST00000553696 DEFB121Q5J5C9 76 aa-0.13□□□□□ -2.43
NEMF-202ENST00000553696 PKHD1P08F94 4074 aa-0.13□□□□□ -2.43
NEMF-202ENST00000553696 HECTD4Q9Y4D8 3996 aa-0.13□□□□□ -2.43
NEMF-202ENST00000553696 PCNX1Q96RV3 2341 aa-0.13□□□□□ -2.43
NEMF-202ENST00000553696 TENM2Q9NT68 2774 aa-0.13□□□□□ -2.43
NEMF-202ENST00000553696 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.14□□□□□ -2.43
NEMF-202ENST00000553696 MUC2Q02817 5179 aa-0.14□□□□□ -2.43
NEMF-202ENST00000553696 LINC00158P58513 81 aa-0.14□□□□□ -2.43
NEMF-202ENST00000553696 SUPT6HQ7KZ85 1726 aaKnown RBP-0.14□□□□□ -2.43
NEMF-202ENST00000553696 PKD1P98161 4303 aa-0.14□□□□□ -2.43
NEMF-202ENST00000553696 RGPD8O14715 1765 aaPredicted RBP-0.14□□□□□ -2.43
NEMF-202ENST00000553696 RGPD5Q99666 1765 aa-0.14□□□□□ -2.43
NEMF-202ENST00000553696 NCOA2Q15596 1464 aa-0.15□□□□□ -2.43
NEMF-202ENST00000553696 IFI6P09912 130 aa-0.15□□□□□ -2.43
NEMF-202ENST00000553696 SRRM2Q9UQ35 2752 aaKnown RBP-0.15□□□□□ -2.43
NEMF-202ENST00000553696 PREX1Q8TCU6 1659 aa-0.15□□□□□ -2.43
NEMF-202ENST00000553696 COL6A3P12111 3177 aa-0.15□□□□□ -2.43
NEMF-202ENST00000553696 POLR1AO95602 1720 aaPredicted RBP-0.16□□□□□ -2.43
NEMF-202ENST00000553696 CICQ96RK0 1608 aaPredicted RBP-0.16□□□□□ -2.43
NEMF-202ENST00000553696 ZNF831Q5JPB2 1677 aa-0.16□□□□□ -2.44
NEMF-202ENST00000553696 SMIM13P0DJ93 91 aa-0.16□□□□□ -2.44
NEMF-202ENST00000553696 NREPQ16612 68 aa-0.16□□□□□ -2.44
NEMF-202ENST00000553696 KRTAP19-7Q3SYF9 63 aa-0.16□□□□□ -2.44
NEMF-202ENST00000553696 TIAM2Q8IVF5 1701 aa-0.16□□□□□ -2.44
NEMF-202ENST00000553696 CCDC88BA6NC98 1476 aa-0.16□□□□□ -2.44
NEMF-202ENST00000553696 PTPN23Q9H3S7 1636 aa-0.16□□□□□ -2.44
NEMF-202ENST00000553696 MAP3K4Q9Y6R4 1608 aa-0.16□□□□□ -2.44
NEMF-202ENST00000553696 LTN1O94822 1766 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 NBEAL1Q6ZS30 2694 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 LCE6AA0A183 80 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 C9orf92A6NGG3 77 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 H3BUT2 72 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 NDUFA4O00483 81 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 MRPL33O75394 65 aaKnown RBP-0.17□□□□□ -2.44
NEMF-202ENST00000553696 KRTAP6-2Q3LI66 62 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.17□□□□□ -2.44
NEMF-202ENST00000553696 PDZD2O15018 2839 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 KIF14Q15058 1648 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 USP32Q8NFA0 1604 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 STAB2Q8WWQ8 2551 aa-0.17□□□□□ -2.44
NEMF-202ENST00000553696 KNL1Q8NG31 2342 aa-0.18□□□□□ -2.44
NEMF-202ENST00000553696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.18□□□□□ -2.44
NEMF-202ENST00000553696 DOT1LQ8TEK3 1739 aa-0.18□□□□□ -2.44
NEMF-202ENST00000553696 SMARCA2P51531 1590 aa-0.18□□□□□ -2.44
NEMF-202ENST00000553696 SPRR2EP22531 72 aa-0.18□□□□□ -2.44
NEMF-202ENST00000553696 BVES-AS1Q5T3Y7 98 aa-0.18□□□□□ -2.44
NEMF-202ENST00000553696 C18orf32Q8TCD1 76 aa-0.18□□□□□ -2.44
NEMF-202ENST00000553696 CCDC18Q5T9S5 1454 aa-0.18□□□□□ -2.44
NEMF-202ENST00000553696 ADAMTS12P58397 1594 aa-0.19□□□□□ -2.44
NEMF-202ENST00000553696 DEFB131BA0A096LNP1 70 aa-0.19□□□□□ -2.44
NEMF-202ENST00000553696 LYNX1G3V0Z9 82 aa-0.19□□□□□ -2.44
NEMF-202ENST00000553696 MED14O60244 1454 aa-0.19□□□□□ -2.44
NEMF-202ENST00000553696 C4AP0C0L4 1744 aa-0.19□□□□□ -2.44
NEMF-202ENST00000553696 C4BP0C0L5 1744 aa-0.19□□□□□ -2.44
NEMF-202ENST00000553696 ABCC1P33527 1531 aa-0.19□□□□□ -2.44
NEMF-202ENST00000553696 SETD2Q9BYW2 2564 aaPredicted RBP-0.19□□□□□ -2.44
NEMF-202ENST00000553696 FLGP20930 4061 aaPredicted RBP-0.19□□□□□ -2.44
NEMF-202ENST00000553696 MAP1AP78559 2803 aaPredicted RBP-0.19□□□□□ -2.44
NEMF-202ENST00000553696 DSTQ03001 7570 aaKnown RBP-0.2□□□□□ -2.44
NEMF-202ENST00000553696 HECTD1Q9ULT8 2610 aa-0.2□□□□□ -2.44
NEMF-202ENST00000553696 H3BNG1 76 aa-0.2□□□□□ -2.44
NEMF-202ENST00000553696 DEFA5Q01523 94 aa-0.2□□□□□ -2.44
NEMF-202ENST00000553696 MAGI3Q5TCQ9 1506 aa-0.2□□□□□ -2.44
NEMF-202ENST00000553696 NWD1Q149M9 1564 aa-0.2□□□□□ -2.44
NEMF-202ENST00000553696 RB1CC1Q8TDY2 1594 aa-0.2□□□□□ -2.44
NEMF-202ENST00000553696 AKAP13Q12802 2813 aa-0.2□□□□□ -2.44
NEMF-202ENST00000553696 TRANK1O15050 2925 aa-0.2□□□□□ -2.44
NEMF-202ENST00000553696 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.21□□□□□ -2.44
NEMF-202ENST00000553696 ANKRD50Q9ULJ7 1429 aa-0.21□□□□□ -2.44
NEMF-202ENST00000553696 MUC12Q9UKN1 5478 aa-0.21□□□□□ -2.44
NEMF-202ENST00000553696 SCN11AQ9UI33 1791 aa-0.21□□□□□ -2.44
NEMF-202ENST00000553696 PDE4DIPQ5VU43 2346 aa-0.21□□□□□ -2.44
NEMF-202ENST00000553696 H0YAA0 97 aa-0.21□□□□□ -2.44
NEMF-202ENST00000553696 MT1AP04731 61 aa-0.21□□□□□ -2.44
NEMF-202ENST00000553696 DEFB130BP0DP73 79 aa-0.21□□□□□ -2.44
NEMF-202ENST00000553696 DEFB130AP0DP74 79 aa-0.21□□□□□ -2.44
NEMF-202ENST00000553696 PRLHP81277 87 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms