RNA–Protein interactions for RNA: ENST00000553696.1

NEMF-202, Transcript of nuclear export mediator factor, humanhuman

TSL 3

Gene NEMF, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-202ENST00000553696 AEBP2Q6ZN18 517 aaPredicted RBP26.08■■□□□ 1.77
NEMF-202ENST00000553696 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
NEMF-202ENST00000553696 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
NEMF-202ENST00000553696 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
NEMF-202ENST00000553696 FOXD1Q16676 465 aa20.62■□□□□ 0.89
NEMF-202ENST00000553696 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
NEMF-202ENST00000553696 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
NEMF-202ENST00000553696 ADRA2BP18089 450 aa19.49■□□□□ 0.71
NEMF-202ENST00000553696 PIAS4Q8N2W9 510 aaPredicted RBP19.28■□□□□ 0.68
NEMF-202ENST00000553696 MSH5O43196 834 aa19.01■□□□□ 0.63
NEMF-202ENST00000553696 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
NEMF-202ENST00000553696 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
NEMF-202ENST00000553696 PPP4R3CPQ6ZMV5 832 aa17.72■□□□□ 0.43
NEMF-202ENST00000553696 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
NEMF-202ENST00000553696 DMRT2Q9Y5R5 561 aa17.57■□□□□ 0.4
NEMF-202ENST00000553696 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
NEMF-202ENST00000553696 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
NEMF-202ENST00000553696 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
NEMF-202ENST00000553696 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
NEMF-202ENST00000553696 KCNA4P22459 653 aa16.98■□□□□ 0.31
NEMF-202ENST00000553696 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
NEMF-202ENST00000553696 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
NEMF-202ENST00000553696 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
NEMF-202ENST00000553696 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
NEMF-202ENST00000553696 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
NEMF-202ENST00000553696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.18
NEMF-202ENST00000553696 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
NEMF-202ENST00000553696 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
NEMF-202ENST00000553696 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
NEMF-202ENST00000553696 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
NEMF-202ENST00000553696 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
NEMF-202ENST00000553696 ZBTB22O15209 634 aa15.68■□□□□ 0.1
NEMF-202ENST00000553696 FOXD4L1Q9NU39 408 aa15.68■□□□□ 0.1
NEMF-202ENST00000553696 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
NEMF-202ENST00000553696 CAPN15O75808 1086 aa15.56■□□□□ 0.08
NEMF-202ENST00000553696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
NEMF-202ENST00000553696 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
NEMF-202ENST00000553696 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
NEMF-202ENST00000553696 APLP2Q06481 763 aa15.44■□□□□ 0.06
NEMF-202ENST00000553696 DSG3P32926 999 aa15.42■□□□□ 0.06
NEMF-202ENST00000553696 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
NEMF-202ENST00000553696 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
NEMF-202ENST00000553696 ABCB7O75027 752 aa15.31■□□□□ 0.04
NEMF-202ENST00000553696 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
NEMF-202ENST00000553696 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
NEMF-202ENST00000553696 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
NEMF-202ENST00000553696 ATXN8OSP0DMR3 200 aa15.13■□□□□ 0.01
NEMF-202ENST00000553696 POLA2Q14181 598 aa15.06■□□□□ 0
NEMF-202ENST00000553696 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
NEMF-202ENST00000553696 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
NEMF-202ENST00000553696 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
NEMF-202ENST00000553696 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
NEMF-202ENST00000553696 FBLN2P98095 1184 aa14.54□□□□□ -0.08
NEMF-202ENST00000553696 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
NEMF-202ENST00000553696 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
NEMF-202ENST00000553696 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
NEMF-202ENST00000553696 SPDYE2Q495Y8 402 aa14.36□□□□□ -0.11
NEMF-202ENST00000553696 POTEHQ6S545 545 aa14.36□□□□□ -0.11
NEMF-202ENST00000553696 REM2Q8IYK8 340 aaPredicted RBP14.28□□□□□ -0.12
NEMF-202ENST00000553696 SSUH2Q9Y2M2 353 aa14.28□□□□□ -0.12
NEMF-202ENST00000553696 CHRDL2Q6WN34 429 aa14.25□□□□□ -0.13
NEMF-202ENST00000553696 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
NEMF-202ENST00000553696 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
NEMF-202ENST00000553696 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
NEMF-202ENST00000553696 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
NEMF-202ENST00000553696 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
NEMF-202ENST00000553696 SPDYE1Q8NFV5 336 aaPredicted RBP14□□□□□ -0.17
NEMF-202ENST00000553696 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
NEMF-202ENST00000553696 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
NEMF-202ENST00000553696 PROM2Q8N271 834 aa13.86□□□□□ -0.19
NEMF-202ENST00000553696 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
NEMF-202ENST00000553696 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
NEMF-202ENST00000553696 FKBP8Q14318 412 aa13.76□□□□□ -0.21
NEMF-202ENST00000553696 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
NEMF-202ENST00000553696 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
NEMF-202ENST00000553696 HAX1O00165 279 aa13.67□□□□□ -0.22
NEMF-202ENST00000553696 EVX2Q03828 476 aa13.67□□□□□ -0.22
NEMF-202ENST00000553696 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
NEMF-202ENST00000553696 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
NEMF-202ENST00000553696 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
NEMF-202ENST00000553696 C19orf67A6NJJ6 358 aa13.48□□□□□ -0.25
NEMF-202ENST00000553696 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
NEMF-202ENST00000553696 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
NEMF-202ENST00000553696 MIER1Q8N108 512 aa13.31□□□□□ -0.28
NEMF-202ENST00000553696 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
NEMF-202ENST00000553696 GABBR2O75899 941 aa13.25□□□□□ -0.29
NEMF-202ENST00000553696 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
NEMF-202ENST00000553696 PLCD3Q8N3E9 789 aa13.25□□□□□ -0.29
NEMF-202ENST00000553696 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
NEMF-202ENST00000553696 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
NEMF-202ENST00000553696 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
NEMF-202ENST00000553696 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
NEMF-202ENST00000553696 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
NEMF-202ENST00000553696 NUBP1P53384 320 aa13.1□□□□□ -0.31
NEMF-202ENST00000553696 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
NEMF-202ENST00000553696 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
NEMF-202ENST00000553696 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
NEMF-202ENST00000553696 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
NEMF-202ENST00000553696 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
NEMF-202ENST00000553696 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms