RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 NUP98P52948 1817 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 SCN8AQ9UQD0 1980 aa1.05□□□□□ -2.24
VRK1-202ENST00000553683 C4BP0C0L5 1744 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 RGPD8O14715 1765 aaPredicted RBP1.04□□□□□ -2.24
VRK1-202ENST00000553683 ANKRD36CQ5JPF3 1778 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 RGPD5Q99666 1765 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 DLEC1Q9Y238 1755 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 OBSL1O75147 1896 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 A0A0J9YY99 117 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 TRBV6-5A0A0K0K1A5 114 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 CTXND1A0A1B0GTU2 59 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 A0A1B0GU33 70 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 FCER1GP30273 86 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 C1orf137Q5JT78 98 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 ZNF833PQ6ZTB9 187 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 Q86TA4 180 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 WFDC6Q9BQY6 131 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 Q9BRP9 147 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 LHFPL6Q9Y693 200 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 LINC01558Q9Y6Z2 57 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 TANC2Q9HCD6 1990 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 ACACAQ13085 2346 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 FAT4Q6V0I7 4981 aa1.04□□□□□ -2.24
VRK1-202ENST00000553683 LOC285556D6RIA3 1793 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 BCORQ6W2J9 1755 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 SVEP1Q4LDE5 3571 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 PDCD11Q14690 1871 aaKnown RBP1.03□□□□□ -2.24
VRK1-202ENST00000553683 GBF1Q92538 1859 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 URB1O60287 2271 aaKnown RBP1.03□□□□□ -2.24
VRK1-202ENST00000553683 IGHV3-64A0A075B6Q5 118 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 TRAV12-1A0A0B4J245 112 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 TRBV10-1A0A0K0K1A3 114 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 IGIPA6NJ69 53 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 HIGD1CA8MV81 97 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 PRR15LQ9BU68 103 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 TTTY12Q9BZ98 90 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 LENEPQ9Y5L5 61 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 MINOS1-NBL1R4GNA1 71 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 COL4A1P02462 1669 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 TOGARAM1Q9Y4F4 1720 aa1.03□□□□□ -2.24
VRK1-202ENST00000553683 CPAMD8Q8IZJ3 1885 aa1.03□□□□□ -2.25
VRK1-202ENST00000553683 SONP18583 2426 aaKnown RBP1.03□□□□□ -2.25
VRK1-202ENST00000553683 IGKV3-7A0A075B6H7 116 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 NUPR2A6NF83 97 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 M0R135 149 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 MGAMO43451 1857 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 SPINK4O60575 86 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 ACANP16112 2415 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 PTPRDP23468 1912 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 PLNP26678 52 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 SPINK7P58062 85 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 FXYD6P3P58550 94 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 SPAG11BQ08648 103 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 NREPQ16612 68 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 SPANXN5Q5MJ07 72 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 FAM74A4Q5TZK3 123 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 SPAG11AQ6PDA7 123 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 ENHOQ6UWT2 76 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 GCC2Q8IWJ2 1684 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 DDX60Q8IY21 1712 aaKnown RBP1.02□□□□□ -2.25
VRK1-202ENST00000553683 FDCSPQ8NFU4 85 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 SPRR4Q96PI1 79 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 AMELXQ99217 191 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 ANAPC1Q9H1A4 1944 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 MRPL36Q9P0J6 103 aaKnown RBP1.02□□□□□ -2.25
VRK1-202ENST00000553683 ORMDL1Q9P0S3 153 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 FAM208AQ9UK61 1670 aaKnown RBP1.02□□□□□ -2.25
VRK1-202ENST00000553683 MYO5AQ9Y4I1 1855 aaKnown RBP1.02□□□□□ -2.25
VRK1-202ENST00000553683 COL7A1Q02388 2944 aa1.02□□□□□ -2.25
VRK1-202ENST00000553683 EXPH5Q8NEV8 1989 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 DOCK1Q14185 1865 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 SLX4Q8IY92 1834 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 ATAD5Q96QE3 1844 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 MUC22E2RYF6 1773 aaPredicted RBP1.01□□□□□ -2.25
VRK1-202ENST00000553683 LAMB1P07942 1786 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 RNF213Q63HN8 5207 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 TRAV21A0A0B4J279 112 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 F8VRH5 84 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 I3L3M4 83 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 M0R3E3 92 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 PPP1R17O96001 155 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 CCL3L1P16619 93 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 ZNF137PP52743 207 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 PDE6HQ13956 83 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 SPATA8Q6RVD6 105 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 DMAC1Q96GE9 116 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 MUC4Q99102 2169 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 ZFC3H1O60293 1989 aaKnown RBP1.01□□□□□ -2.25
VRK1-202ENST00000553683 ZNF236Q9UL36 1845 aa1.01□□□□□ -2.25
VRK1-202ENST00000553683 PRKDCP78527 4128 aaKnown RBP1□□□□□ -2.25
VRK1-202ENST00000553683 PTPRBP23467 1997 aa1□□□□□ -2.25
VRK1-202ENST00000553683 GREB1Q4ZG55 1949 aa1□□□□□ -2.25
VRK1-202ENST00000553683 DLG5Q8TDM6 1919 aa1□□□□□ -2.25
VRK1-202ENST00000553683 A0A087WTM6 91 aa1□□□□□ -2.25
VRK1-202ENST00000553683 IGKV3OR2-268A0A0C4DH90 116 aa1□□□□□ -2.25
VRK1-202ENST00000553683 A0A0J9YX75 114 aa1□□□□□ -2.25
VRK1-202ENST00000553683 LINC00959A0A1B0GUT2 108 aa1□□□□□ -2.25
VRK1-202ENST00000553683 A0A1B0GUT8 65 aa1□□□□□ -2.25
VRK1-202ENST00000553683 DNAL4O96015 105 aa1□□□□□ -2.25
VRK1-202ENST00000553683 CCL18P55774 89 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms