RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 SCN3AQ9NY46 2000 aa0.2□□□□□ -2.38
CEP290-204ENST00000547926 TANC2Q9HCD6 1990 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 TRBV6-7A0A0A0MS04 114 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 UBE2L5PA0A1B0GUS4 154 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 M0R143 59 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 M0R2T5 61 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 GNG7O60262 68 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 PITX3O75364 302 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 PPYP01298 95 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 IL5P05113 134 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 SLC25A6P12236 298 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 IFITM1P13164 125 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 IL7P13232 177 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 ZNF25P17030 456 aaPredicted RBP0.19□□□□□ -2.38
CEP290-204ENST00000547926 RPL37AP61513 92 aaKnown RBP0.19□□□□□ -2.38
CEP290-204ENST00000547926 NPC2P61916 151 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 UBE2L3P68036 154 aaKnown RBP0.19□□□□□ -2.38
CEP290-204ENST00000547926 HSD52Q0P140 79 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 COX17Q14061 63 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 KRTAP20-2Q3LI61 65 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 NCMAPQ5T1S8 102 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 MRPL54Q6P161 138 aaKnown RBP0.19□□□□□ -2.38
CEP290-204ENST00000547926 ALKAL2Q6UX46 152 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 GTF2H5Q6ZYL4 71 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 BAGE3Q86Y29 109 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 SVBPQ8N300 66 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 C5orf56Q8N8D9 126 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 MYOZ3Q8TDC0 251 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 DEFB104AQ8WTQ1 72 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 C14orf144Q96I85 54 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 FAM167A-AS1Q96KT0 104 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 LIMD2Q9BT23 127 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 TMEM14BQ9NUH8 114 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 FKBP11Q9NYL4 201 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 PLXNA2O75051 1894 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 MYO18AQ92614 2054 aaKnown RBP0.19□□□□□ -2.38
CEP290-204ENST00000547926 MYH1P12882 1939 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 MED12Q93074 2177 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 MYH13Q9UKX3 1938 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 TRAV13-2A0A0B4J235 113 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 TRAV12-3A0A0B4J271 114 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 TRAV17A0A0B4J275 112 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 LOC107984156A0A0G2JMH3 177 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 TMEM218A2RU14 115 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 NAP1L6A6NFF2 107 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 GYPAP02724 150 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 CCL3L1P16619 93 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 UBE2D1P51668 147 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 FXYD4P59646 89 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 PKIAP61925 76 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 HMGN3Q15651 99 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 NEDD8Q15843 81 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 DEFB109BQ30KR1 87 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 SPINK9Q5DT21 86 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 COL5A1-AS1Q5SY13 56 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 Q6ZQY7 126 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 CYP2G1PQ6ZSU1 146 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 VMO1Q7Z5L0 202 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 ARL17AQ8IVW1 177 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 SMIM4Q8WVI0 70 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 C10orf82Q8WW14 230 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 PLAC4Q8WY50 150 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 TRGV9Q99603 122 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 C12orf57Q99622 126 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 MGST2Q99735 147 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 RABAC1Q9UI14 185 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 R4GMQ9 66 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 V9GYH0 126 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 V9GYS6 101 aa0.19□□□□□ -2.38
CEP290-204ENST00000547926 NINQ8N4C6 2090 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 MYO5AQ9Y4I1 1855 aaKnown RBP0.18□□□□□ -2.38
CEP290-204ENST00000547926 MYH6P13533 1939 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 MCM3APO60318 1980 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 MYH9P35579 1960 aaKnown RBP0.18□□□□□ -2.38
CEP290-204ENST00000547926 TRBV7-3A0A075B6L6 115 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 TRBV30A0A0K0K1B3 111 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 NBDYA0A0U1RRE5 68 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 LOC101927531A0A1B0GV80 90 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 NCR3O14931 201 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 APOC3P02656 99 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 SPINK8P0C7L1 97 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 EFNA4P52798 201 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 SMIM11AP58511 58 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 UBE2D3P61077 147 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 UBE2D2P62837 147 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 Q0VG73 95 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 CATR1Q13166 79 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 INSL4Q14641 139 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 PYY3Q5JQD4 70 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 C9orf153Q5TBE3 101 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 CSAG1Q6PB30 78 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 LSM10Q969L4 123 aaKnown RBP0.18□□□□□ -2.38
CEP290-204ENST00000547926 IFI27L1Q96BM0 104 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 LINC01600Q96MT4 127 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 DSCR8Q96T75 97 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 WFDC6Q9BQY6 131 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 DPY30Q9C005 99 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 WFDC10AQ9H1F0 79 aa0.18□□□□□ -2.38
CEP290-204ENST00000547926 DPH3P1Q9H4G8 78 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms