RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 PKHD1L1Q86WI1 4243 aa-1.09□□□□□ -2.58
CCDC38-204ENST00000546816 RNF213Q63HN8 5207 aa-1.09□□□□□ -2.58
CCDC38-204ENST00000546816 LEPROTL1O95214 131 aa-1.09□□□□□ -2.58
CCDC38-204ENST00000546816 ZNF720Q7Z2F6 126 aa-1.09□□□□□ -2.58
CCDC38-204ENST00000546816 ITPR3Q14573 2671 aa-1.09□□□□□ -2.58
CCDC38-204ENST00000546816 HECTD1Q9ULT8 2610 aa-1.09□□□□□ -2.58
CCDC38-204ENST00000546816 UQCRHLA0A096LP55 91 aa-1.1□□□□□ -2.59
CCDC38-204ENST00000546816 LINC00032P0C843 101 aa-1.1□□□□□ -2.59
CCDC38-204ENST00000546816 NMSQ5H8A3 153 aa-1.1□□□□□ -2.59
CCDC38-204ENST00000546816 COL5A1-AS1Q5SY13 56 aa-1.1□□□□□ -2.59
CCDC38-204ENST00000546816 UBE2D4Q9Y2X8 147 aa-1.1□□□□□ -2.59
CCDC38-204ENST00000546816 CRYBG1Q9Y4K1 1723 aa-1.1□□□□□ -2.59
CCDC38-204ENST00000546816 COX6B2Q6YFQ2 88 aa-1.11□□□□□ -2.59
CCDC38-204ENST00000546816 TCEAL7Q9BRU2 100 aa-1.11□□□□□ -2.59
CCDC38-204ENST00000546816 KIF20BQ96Q89 1820 aa-1.11□□□□□ -2.59
CCDC38-204ENST00000546816 EPRSP07814 1512 aaKnown RBP-1.11□□□□□ -2.59
CCDC38-204ENST00000546816 QSER1Q2KHR3 1735 aa-1.12□□□□□ -2.59
CCDC38-204ENST00000546816 PREX1Q8TCU6 1659 aa-1.12□□□□□ -2.59
CCDC38-204ENST00000546816 COX7BP24311 80 aa-1.12□□□□□ -2.59
CCDC38-204ENST00000546816 FAUP35544 74 aaKnown RBP-1.12□□□□□ -2.59
CCDC38-204ENST00000546816 DPY30Q9C005 99 aa-1.12□□□□□ -2.59
CCDC38-204ENST00000546816 TEP1Q99973 2627 aaKnown RBP-1.13□□□□□ -2.59
CCDC38-204ENST00000546816 RGPD2P0DJD1 1756 aa-1.13□□□□□ -2.59
CCDC38-204ENST00000546816 CNTLNQ9NXG0 1405 aa-1.14□□□□□ -2.59
CCDC38-204ENST00000546816 APOBP04114 4563 aaKnown RBP-1.14□□□□□ -2.59
CCDC38-204ENST00000546816 NDUFA3O95167 84 aa-1.14□□□□□ -2.59
CCDC38-204ENST00000546816 ACBD7Q8N6N7 88 aa-1.14□□□□□ -2.59
CCDC38-204ENST00000546816 FANCAO15360 1455 aa-1.14□□□□□ -2.59
CCDC38-204ENST00000546816 CLTCQ00610 1675 aaKnown RBP-1.14□□□□□ -2.59
CCDC38-204ENST00000546816 ANK3Q12955 4377 aaKnown RBP-1.14□□□□□ -2.59
CCDC38-204ENST00000546816 ZZEF1O43149 2961 aa-1.14□□□□□ -2.59
CCDC38-204ENST00000546816 PDE4DIPQ5VU43 2346 aa-1.15□□□□□ -2.59
CCDC38-204ENST00000546816 ATP6V1G2-DDX39BF2Z307 99 aa-1.15□□□□□ -2.59
CCDC38-204ENST00000546816 RBP2P50120 134 aa-1.15□□□□□ -2.59
CCDC38-204ENST00000546816 FASNP49327 2511 aaKnown RBP-1.15□□□□□ -2.59
CCDC38-204ENST00000546816 PKD1L3Q7Z443 1732 aa-1.15□□□□□ -2.59
CCDC38-204ENST00000546816 ALKQ9UM73 1620 aa-1.15□□□□□ -2.59
CCDC38-204ENST00000546816 DMXL1Q9Y485 3027 aa-1.15□□□□□ -2.59
CCDC38-204ENST00000546816 BIRC6Q9NR09 4857 aa-1.16□□□□□ -2.59
CCDC38-204ENST00000546816 H3BNG1 76 aa-1.16□□□□□ -2.6
CCDC38-204ENST00000546816 LAMA1P25391 3075 aa-1.16□□□□□ -2.6
CCDC38-204ENST00000546816 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.16□□□□□ -2.6
CCDC38-204ENST00000546816 RGPD8O14715 1765 aaPredicted RBP-1.16□□□□□ -2.6
CCDC38-204ENST00000546816 RGPD5Q99666 1765 aa-1.16□□□□□ -2.6
CCDC38-204ENST00000546816 LRRC9Q6ZRR7 1453 aa-1.17□□□□□ -2.6
CCDC38-204ENST00000546816 RYR2Q92736 4967 aa-1.17□□□□□ -2.6
CCDC38-204ENST00000546816 LRRC7Q96NW7 1537 aa-1.17□□□□□ -2.6
CCDC38-204ENST00000546816 ATP10BO94823 1461 aa-1.18□□□□□ -2.6
CCDC38-204ENST00000546816 UBR3Q6ZT12 1888 aa-1.18□□□□□ -2.6
CCDC38-204ENST00000546816 RPL38P63173 70 aaKnown RBP-1.18□□□□□ -2.6
CCDC38-204ENST00000546816 MYO18BQ8IUG5 2567 aa-1.18□□□□□ -2.6
CCDC38-204ENST00000546816 VPS13BQ7Z7G8 4022 aa-1.19□□□□□ -2.6
CCDC38-204ENST00000546816 DNAH11Q96DT5 4516 aa-1.19□□□□□ -2.6
CCDC38-204ENST00000546816 A0A1B0GUT8 65 aa-1.19□□□□□ -2.6
CCDC38-204ENST00000546816 C9orf92A6NGG3 77 aa-1.19□□□□□ -2.6
CCDC38-204ENST00000546816 HMGN2P05204 90 aaKnown RBP-1.19□□□□□ -2.6
CCDC38-204ENST00000546816 C4AP0C0L4 1744 aa-1.19□□□□□ -2.6
CCDC38-204ENST00000546816 C4BP0C0L5 1744 aa-1.19□□□□□ -2.6
CCDC38-204ENST00000546816 NCMAPQ5T1S8 102 aa-1.19□□□□□ -2.6
CCDC38-204ENST00000546816 ATP7BP35670 1465 aa-1.19□□□□□ -2.6
CCDC38-204ENST00000546816 ANKRD11Q6UB99 2663 aaPredicted RBP-1.2□□□□□ -2.6
CCDC38-204ENST00000546816 RGPD1P0DJD0 1748 aa-1.2□□□□□ -2.6
CCDC38-204ENST00000546816 GAFA1Q96PS6 74 aa-1.2□□□□□ -2.6
CCDC38-204ENST00000546816 MYH4Q9Y623 1939 aa-1.21□□□□□ -2.6
CCDC38-204ENST00000546816 PLGLAQ15195 96 aa-1.21□□□□□ -2.6
CCDC38-204ENST00000546816 LAMA2P24043 3122 aaKnown RBP-1.21□□□□□ -2.6
CCDC38-204ENST00000546816 IQCF6A8MYZ5 107 aa-1.22□□□□□ -2.6
CCDC38-204ENST00000546816 M0R143 59 aa-1.22□□□□□ -2.6
CCDC38-204ENST00000546816 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.23□□□□□ -2.61
CCDC38-204ENST00000546816 PEG3Q9GZU2 1588 aa-1.23□□□□□ -2.61
CCDC38-204ENST00000546816 NEXMIFQ5QGS0 1516 aa-1.24□□□□□ -2.61
CCDC38-204ENST00000546816 GYPAP02724 150 aa-1.24□□□□□ -2.61
CCDC38-204ENST00000546816 SMIM11AP58511 58 aa-1.24□□□□□ -2.61
CCDC38-204ENST00000546816 C20orf78Q9BR46 151 aa-1.24□□□□□ -2.61
CCDC38-204ENST00000546816 ABCC10Q5T3U5 1492 aa-1.24□□□□□ -2.61
CCDC38-204ENST00000546816 KALRNO60229 2985 aa-1.25□□□□□ -2.61
CCDC38-204ENST00000546816 MYO3AQ8NEV4 1616 aa-1.25□□□□□ -2.61
CCDC38-204ENST00000546816 PEA15Q15121 130 aa-1.25□□□□□ -2.61
CCDC38-204ENST00000546816 PLXNC1O60486 1568 aa-1.25□□□□□ -2.61
CCDC38-204ENST00000546816 TRAV21A0A0B4J279 112 aa-1.26□□□□□ -2.61
CCDC38-204ENST00000546816 CYB5AP00167 134 aa-1.26□□□□□ -2.61
CCDC38-204ENST00000546816 C3orf79P0CE67 100 aa-1.26□□□□□ -2.61
CCDC38-204ENST00000546816 PRO3102Q9H379 93 aa-1.26□□□□□ -2.61
CCDC38-204ENST00000546816 CEP162Q5TB80 1403 aa-1.26□□□□□ -2.61
CCDC38-204ENST00000546816 VPS8Q8N3P4 1428 aa-1.26□□□□□ -2.61
CCDC38-204ENST00000546816 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.26□□□□□ -2.61
CCDC38-204ENST00000546816 TIAM2Q8IVF5 1701 aa-1.26□□□□□ -2.61
CCDC38-204ENST00000546816 DNAH2Q9P225 4427 aa-1.26□□□□□ -2.61
CCDC38-204ENST00000546816 DSPP15924 2871 aaKnown RBP-1.27□□□□□ -2.61
CCDC38-204ENST00000546816 SNHG12Q9BXW3 62 aa-1.27□□□□□ -2.61
CCDC38-204ENST00000546816 ANKRD50Q9ULJ7 1429 aa-1.27□□□□□ -2.61
CCDC38-204ENST00000546816 USP32Q8NFA0 1604 aa-1.27□□□□□ -2.61
CCDC38-204ENST00000546816 SUPT6HQ7KZ85 1726 aaKnown RBP-1.27□□□□□ -2.61
CCDC38-204ENST00000546816 UBR1Q8IWV7 1749 aa-1.27□□□□□ -2.61
CCDC38-204ENST00000546816 ANKRD26Q9UPS8 1709 aa-1.27□□□□□ -2.61
CCDC38-204ENST00000546816 GCN1Q92616 2671 aaKnown RBP-1.28□□□□□ -2.61
CCDC38-204ENST00000546816 WIZO95785 1651 aa-1.28□□□□□ -2.61
CCDC38-204ENST00000546816 POLR1AO95602 1720 aaPredicted RBP-1.29□□□□□ -2.62
CCDC38-204ENST00000546816 LINC00158P58513 81 aa-1.29□□□□□ -2.62
CCDC38-204ENST00000546816 WFDC9Q8NEX5 89 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms