RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 BIVM-ERCC5R4GMW8 1640 aa1.71□□□□□ -2.14
PRKDC-209ENST00000540819 CCL22O00626 93 aa1.71□□□□□ -2.14
PRKDC-209ENST00000540819 CLASP1Q7Z460 1538 aa1.71□□□□□ -2.14
PRKDC-209ENST00000540819 CACNA1HO95180 2353 aa1.7□□□□□ -2.14
PRKDC-209ENST00000540819 MRPL33O75394 65 aaKnown RBP1.7□□□□□ -2.14
PRKDC-209ENST00000540819 COX6B1P14854 86 aa1.7□□□□□ -2.14
PRKDC-209ENST00000540819 COX6B2Q6YFQ2 88 aa1.7□□□□□ -2.14
PRKDC-209ENST00000540819 PTPRQQ9UMZ3 2332 aa1.7□□□□□ -2.14
PRKDC-209ENST00000540819 FANCD2Q9BXW9 1451 aa1.69□□□□□ -2.14
PRKDC-209ENST00000540819 ZNF462Q96JM2 2506 aa1.69□□□□□ -2.14
PRKDC-209ENST00000540819 UGGT1Q9NYU2 1555 aa1.68□□□□□ -2.14
PRKDC-209ENST00000540819 DEFB131BA0A096LNP1 70 aa1.68□□□□□ -2.14
PRKDC-209ENST00000540819 PRB3Q04118 309 aaPredicted RBP1.68□□□□□ -2.14
PRKDC-209ENST00000540819 Q5VSD8 79 aa1.68□□□□□ -2.14
PRKDC-209ENST00000540819 MUC6Q6W4X9 2439 aa1.68□□□□□ -2.14
PRKDC-209ENST00000540819 ETDCA0A1B0GVM5 59 aa1.67□□□□□ -2.14
PRKDC-209ENST00000540819 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
PRKDC-209ENST00000540819 A0A1B0GUL6 1792 aa1.67□□□□□ -2.14
PRKDC-209ENST00000540819 SPTBN2O15020 2390 aa1.66□□□□□ -2.14
PRKDC-209ENST00000540819 FCER1GP30273 86 aa1.66□□□□□ -2.14
PRKDC-209ENST00000540819 ANKRD36CQ5JPF3 1778 aa1.66□□□□□ -2.14
PRKDC-209ENST00000540819 HELZ2Q9BYK8 2649 aaKnown RBP1.66□□□□□ -2.14
PRKDC-209ENST00000540819 ADCY10Q96PN6 1610 aa1.66□□□□□ -2.14
PRKDC-209ENST00000540819 PIEZO2Q9H5I5 2752 aa1.65□□□□□ -2.14
PRKDC-209ENST00000540819 FXYD6Q9H0Q3 95 aa1.65□□□□□ -2.15
PRKDC-209ENST00000540819 SNRPGP15A8MWD9 76 aa1.64□□□□□ -2.15
PRKDC-209ENST00000540819 K7EMI3 77 aa1.64□□□□□ -2.15
PRKDC-209ENST00000540819 NMES1Q9C002 83 aa1.64□□□□□ -2.15
PRKDC-209ENST00000540819 SERF2P84101 59 aa1.63□□□□□ -2.15
PRKDC-209ENST00000540819 SPRR1AP35321 89 aa1.62□□□□□ -2.15
PRKDC-209ENST00000540819 NDUFA3O95167 84 aa1.59□□□□□ -2.15
PRKDC-209ENST00000540819 C4AP0C0L4 1744 aa1.59□□□□□ -2.16
PRKDC-209ENST00000540819 C4BP0C0L5 1744 aa1.59□□□□□ -2.16
PRKDC-209ENST00000540819 TTC28Q96AY4 2481 aa1.58□□□□□ -2.16
PRKDC-209ENST00000540819 M0R1W7 72 aa1.58□□□□□ -2.16
PRKDC-209ENST00000540819 SPRR1BP22528 89 aa1.58□□□□□ -2.16
PRKDC-209ENST00000540819 NCBP2-AS2Q69YL0 99 aa1.58□□□□□ -2.16
PRKDC-209ENST00000540819 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
PRKDC-209ENST00000540819 CDKN2A-AS1Q9UH64 79 aa1.58□□□□□ -2.16
PRKDC-209ENST00000540819 CRIP1P50238 77 aa1.57□□□□□ -2.16
PRKDC-209ENST00000540819 DEFB105AQ8NG35 78 aa1.57□□□□□ -2.16
PRKDC-209ENST00000540819 F8P00451 2351 aa1.56□□□□□ -2.16
PRKDC-209ENST00000540819 NRXN3Q9Y4C0 1643 aa1.56□□□□□ -2.16
PRKDC-209ENST00000540819 PRO3102Q9H379 93 aa1.56□□□□□ -2.16
PRKDC-209ENST00000540819 APLNQ9ULZ1 77 aa1.56□□□□□ -2.16
PRKDC-209ENST00000540819 SPTBN1Q01082 2364 aaKnown RBP1.56□□□□□ -2.16
PRKDC-209ENST00000540819 EFCAB6Q5THR3 1501 aa1.56□□□□□ -2.16
PRKDC-209ENST00000540819 BPTFQ12830 3046 aa1.55□□□□□ -2.16
PRKDC-209ENST00000540819 IGIPA6NJ69 53 aa1.55□□□□□ -2.16
PRKDC-209ENST00000540819 H1FX-AS1Q4G0G2 97 aa1.54□□□□□ -2.16
PRKDC-209ENST00000540819 DEPDC5O75140 1603 aa1.54□□□□□ -2.16
PRKDC-209ENST00000540819 ABCA5Q8WWZ7 1642 aa1.52□□□□□ -2.17
PRKDC-209ENST00000540819 ABCC8Q09428 1581 aa1.52□□□□□ -2.17
PRKDC-209ENST00000540819 LELP1Q5T871 98 aa1.52□□□□□ -2.17
PRKDC-209ENST00000540819 POLQO75417 2590 aa1.51□□□□□ -2.17
PRKDC-209ENST00000540819 LINC00158P58513 81 aa1.51□□□□□ -2.17
PRKDC-209ENST00000540819 CMC2Q9NRP2 79 aa1.51□□□□□ -2.17
PRKDC-209ENST00000540819 MEGF8Q7Z7M0 2845 aa1.51□□□□□ -2.17
PRKDC-209ENST00000540819 AGLP35573 1532 aa1.5□□□□□ -2.17
PRKDC-209ENST00000540819 TOGARAM1Q9Y4F4 1720 aa1.5□□□□□ -2.17
PRKDC-209ENST00000540819 UNC79Q9P2D8 2635 aa1.5□□□□□ -2.17
PRKDC-209ENST00000540819 LYNX1G3V0Z9 82 aa1.49□□□□□ -2.17
PRKDC-209ENST00000540819 PLNP26678 52 aa1.49□□□□□ -2.17
PRKDC-209ENST00000540819 WFDC13Q8IUB5 93 aa1.49□□□□□ -2.17
PRKDC-209ENST00000540819 H0YAA0 97 aa1.48□□□□□ -2.17
PRKDC-209ENST00000540819 SPINK4O60575 86 aa1.48□□□□□ -2.17
PRKDC-209ENST00000540819 KIAA0586Q9BVV6 1533 aa1.48□□□□□ -2.17
PRKDC-209ENST00000540819 PKDREJQ9NTG1 2253 aa1.48□□□□□ -2.17
PRKDC-209ENST00000540819 ZNF292O60281 2723 aa1.47□□□□□ -2.17
PRKDC-209ENST00000540819 GVINP1Q7Z2Y8 2422 aa1.47□□□□□ -2.17
PRKDC-209ENST00000540819 ABCA12Q86UK0 2595 aa1.45□□□□□ -2.18
PRKDC-209ENST00000540819 KLK9Q2XQG4 91 aa1.45□□□□□ -2.18
PRKDC-209ENST00000540819 IQGAP2Q13576 1575 aa1.44□□□□□ -2.18
PRKDC-209ENST00000540819 PRH1P02810 166 aa1.44□□□□□ -2.18
PRKDC-209ENST00000540819 H0YGX0 51 aa1.43□□□□□ -2.18
PRKDC-209ENST00000540819 FCGBPQ9Y6R7 5405 aaPredicted RBP1.43□□□□□ -2.18
PRKDC-209ENST00000540819 KNL1Q8NG31 2342 aa1.42□□□□□ -2.18
PRKDC-209ENST00000540819 CDC42BPAQ5VT25 1732 aa1.41□□□□□ -2.18
PRKDC-209ENST00000540819 WNK2Q9Y3S1 2297 aa1.41□□□□□ -2.18
PRKDC-209ENST00000540819 DEFB109BQ30KR1 87 aa1.4□□□□□ -2.19
PRKDC-209ENST00000540819 CELSR2Q9HCU4 2923 aa1.39□□□□□ -2.19
PRKDC-209ENST00000540819 LOC730098B7Z3J9 87 aa1.39□□□□□ -2.19
PRKDC-209ENST00000540819 AKAP6Q13023 2319 aa1.38□□□□□ -2.19
PRKDC-209ENST00000540819 MINOS1Q5TGZ0 78 aa1.38□□□□□ -2.19
PRKDC-209ENST00000540819 TOMM5Q8N4H5 51 aa1.38□□□□□ -2.19
PRKDC-209ENST00000540819 TMEM167BQ9NRX6 74 aa1.38□□□□□ -2.19
PRKDC-209ENST00000540819 BDP1A6H8Y1 2624 aa1.38□□□□□ -2.19
PRKDC-209ENST00000540819 SPINK6Q6UWN8 80 aa1.37□□□□□ -2.19
PRKDC-209ENST00000540819 SMIM27A0A1W2PRY6 76 aa1.36□□□□□ -2.19
PRKDC-209ENST00000540819 IAPPP10997 89 aa1.36□□□□□ -2.19
PRKDC-209ENST00000540819 ABRACLQ9P1F3 81 aa1.36□□□□□ -2.19
PRKDC-209ENST00000540819 TOP2AP11388 1531 aaKnown RBP1.35□□□□□ -2.19
PRKDC-209ENST00000540819 DDX60Q8IY21 1712 aaKnown RBP1.35□□□□□ -2.19
PRKDC-209ENST00000540819 FBN3Q75N90 2809 aa1.34□□□□□ -2.19
PRKDC-209ENST00000540819 LINC01546A6NGU7 62 aa1.34□□□□□ -2.19
PRKDC-209ENST00000540819 DEFB130BP0DP73 79 aa1.34□□□□□ -2.19
PRKDC-209ENST00000540819 DEFB130AP0DP74 79 aa1.34□□□□□ -2.19
PRKDC-209ENST00000540819 FAM208AQ9UK61 1670 aaKnown RBP1.34□□□□□ -2.19
PRKDC-209ENST00000540819 CHD9Q3L8U1 2897 aa1.34□□□□□ -2.2
PRKDC-209ENST00000540819 TPRP12270 2363 aaKnown RBP1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms