RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 H3BVH4 76 aa0.48□□□□□ -2.33
MDM1-208ENST00000538454 COX8AP10176 69 aa0.48□□□□□ -2.33
MDM1-208ENST00000538454 SPRR1AP35321 89 aa0.48□□□□□ -2.33
MDM1-208ENST00000538454 MRPL34Q9BQ48 92 aaKnown RBP0.48□□□□□ -2.33
MDM1-208ENST00000538454 HILPDAQ9Y5L2 63 aa0.48□□□□□ -2.33
MDM1-208ENST00000538454 INO80Q9ULG1 1556 aaPredicted RBP0.48□□□□□ -2.33
MDM1-208ENST00000538454 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
MDM1-208ENST00000538454 EFCAB5A4FU69 1503 aa0.48□□□□□ -2.33
MDM1-208ENST00000538454 LMTK2Q8IWU2 1503 aa0.48□□□□□ -2.33
MDM1-208ENST00000538454 ANKRD50Q9ULJ7 1429 aa0.47□□□□□ -2.33
MDM1-208ENST00000538454 SPRR1BP22528 89 aa0.47□□□□□ -2.33
MDM1-208ENST00000538454 RPL38P63173 70 aaKnown RBP0.47□□□□□ -2.33
MDM1-208ENST00000538454 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
MDM1-208ENST00000538454 DIP2AQ14689 1571 aa0.47□□□□□ -2.33
MDM1-208ENST00000538454 NESP48681 1621 aa0.46□□□□□ -2.34
MDM1-208ENST00000538454 NRAPQ86VF7 1730 aa0.46□□□□□ -2.34
MDM1-208ENST00000538454 NHSQ6T4R5 1651 aa0.46□□□□□ -2.34
MDM1-208ENST00000538454 TNRC6CQ9HCJ0 1690 aaKnown RBP0.46□□□□□ -2.34
MDM1-208ENST00000538454 NDUFA4O00483 81 aa0.45□□□□□ -2.34
MDM1-208ENST00000538454 DEFB105AQ8NG35 78 aa0.45□□□□□ -2.34
MDM1-208ENST00000538454 GVINP1Q7Z2Y8 2422 aa0.45□□□□□ -2.34
MDM1-208ENST00000538454 MAST4O15021 2626 aa0.45□□□□□ -2.34
MDM1-208ENST00000538454 DDX60LQ5H9U9 1706 aaKnown RBP0.44□□□□□ -2.34
MDM1-208ENST00000538454 VWFP04275 2813 aa0.44□□□□□ -2.34
MDM1-208ENST00000538454 IGSF10Q6WRI0 2623 aa0.44□□□□□ -2.34
MDM1-208ENST00000538454 CCL22O00626 93 aa0.44□□□□□ -2.34
MDM1-208ENST00000538454 ATXN8Q156A1 80 aa0.44□□□□□ -2.34
MDM1-208ENST00000538454 LELP1Q5T871 98 aa0.44□□□□□ -2.34
MDM1-208ENST00000538454 APLNQ9ULZ1 77 aa0.44□□□□□ -2.34
MDM1-208ENST00000538454 CCDC180Q9P1Z9 1646 aa0.44□□□□□ -2.34
MDM1-208ENST00000538454 TJP1Q07157 1748 aa0.44□□□□□ -2.34
MDM1-208ENST00000538454 A0A087WWC5 75 aa0.43□□□□□ -2.34
MDM1-208ENST00000538454 KLK9Q2XQG4 91 aa0.43□□□□□ -2.34
MDM1-208ENST00000538454 H1FX-AS1Q4G0G2 97 aa0.43□□□□□ -2.34
MDM1-208ENST00000538454 GNG13Q9P2W3 67 aa0.43□□□□□ -2.34
MDM1-208ENST00000538454 U3KQA8 63 aa0.43□□□□□ -2.34
MDM1-208ENST00000538454 HFM1A2PYH4 1435 aa0.43□□□□□ -2.34
MDM1-208ENST00000538454 SYNE1Q8NF91 8797 aaKnown RBP0.42□□□□□ -2.34
MDM1-208ENST00000538454 C4AP0C0L4 1744 aa0.42□□□□□ -2.34
MDM1-208ENST00000538454 C4BP0C0L5 1744 aa0.42□□□□□ -2.34
MDM1-208ENST00000538454 DEFB109BQ30KR1 87 aa0.42□□□□□ -2.34
MDM1-208ENST00000538454 ENHOQ6UWT2 76 aa0.42□□□□□ -2.34
MDM1-208ENST00000538454 FXYD6Q9H0Q3 95 aa0.42□□□□□ -2.34
MDM1-208ENST00000538454 CHD6Q8TD26 2715 aa0.42□□□□□ -2.34
MDM1-208ENST00000538454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.41□□□□□ -2.34
MDM1-208ENST00000538454 NCOR1O75376 2440 aa0.41□□□□□ -2.34
MDM1-208ENST00000538454 NDUFA3O95167 84 aa0.41□□□□□ -2.34
MDM1-208ENST00000538454 C3orf79P0CE67 100 aa0.41□□□□□ -2.34
MDM1-208ENST00000538454 COX6B2Q6YFQ2 88 aa0.41□□□□□ -2.34
MDM1-208ENST00000538454 CDKN2A-AS1Q9UH64 79 aa0.41□□□□□ -2.34
MDM1-208ENST00000538454 NCOR2Q9Y618 2525 aa0.41□□□□□ -2.34
MDM1-208ENST00000538454 RALGAPBQ86X10 1494 aa0.41□□□□□ -2.34
MDM1-208ENST00000538454 UBR5O95071 2799 aaPredicted RBP0.4□□□□□ -2.34
MDM1-208ENST00000538454 CSMD3Q7Z407 3707 aa0.4□□□□□ -2.35
MDM1-208ENST00000538454 ABCA6Q8N139 1617 aa0.4□□□□□ -2.35
MDM1-208ENST00000538454 RNF17Q9BXT8 1623 aaKnown RBP0.4□□□□□ -2.35
MDM1-208ENST00000538454 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
MDM1-208ENST00000538454 TIAM1Q13009 1591 aa0.4□□□□□ -2.35
MDM1-208ENST00000538454 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
MDM1-208ENST00000538454 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
MDM1-208ENST00000538454 TENM4Q6N022 2769 aa0.4□□□□□ -2.35
MDM1-208ENST00000538454 PKD1L1Q8TDX9 2849 aa0.39□□□□□ -2.35
MDM1-208ENST00000538454 SPINK4O60575 86 aa0.39□□□□□ -2.35
MDM1-208ENST00000538454 S100ZQ8WXG8 99 aa0.39□□□□□ -2.35
MDM1-208ENST00000538454 UBL5Q9BZL1 73 aa0.39□□□□□ -2.35
MDM1-208ENST00000538454 KCNQ1DNQ9H478 68 aa0.39□□□□□ -2.35
MDM1-208ENST00000538454 CNOT1A5YKK6 2376 aaKnown RBP0.38□□□□□ -2.35
MDM1-208ENST00000538454 GLI2P10070 1586 aa0.38□□□□□ -2.35
MDM1-208ENST00000538454 WFDC13Q8IUB5 93 aa0.38□□□□□ -2.35
MDM1-208ENST00000538454 CELSR1Q9NYQ6 3014 aa0.38□□□□□ -2.35
MDM1-208ENST00000538454 ATRQ13535 2644 aa0.37□□□□□ -2.35
MDM1-208ENST00000538454 DEFB131BA0A096LNP1 70 aa0.37□□□□□ -2.35
MDM1-208ENST00000538454 LINC01549A6NIU2 74 aa0.37□□□□□ -2.35
MDM1-208ENST00000538454 SFTA3P0C7M3 94 aa0.37□□□□□ -2.35
MDM1-208ENST00000538454 PRO3102Q9H379 93 aa0.37□□□□□ -2.35
MDM1-208ENST00000538454 SPTA1P02549 2419 aa0.37□□□□□ -2.35
MDM1-208ENST00000538454 CSPG4Q6UVK1 2322 aa0.37□□□□□ -2.35
MDM1-208ENST00000538454 C3P01024 1663 aa0.37□□□□□ -2.35
MDM1-208ENST00000538454 HRNRQ86YZ3 2850 aaPredicted RBP0.36□□□□□ -2.35
MDM1-208ENST00000538454 ABCA2Q9BZC7 2435 aa0.36□□□□□ -2.35
MDM1-208ENST00000538454 PLXNC1O60486 1568 aa0.36□□□□□ -2.35
MDM1-208ENST00000538454 PTPN13Q12923 2485 aa0.36□□□□□ -2.35
MDM1-208ENST00000538454 ABCC6O95255 1503 aa0.35□□□□□ -2.35
MDM1-208ENST00000538454 ALS2Q96Q42 1657 aa0.35□□□□□ -2.35
MDM1-208ENST00000538454 ETDCA0A1B0GVM5 59 aa0.35□□□□□ -2.35
MDM1-208ENST00000538454 H0YAA0 97 aa0.35□□□□□ -2.35
MDM1-208ENST00000538454 MRPL33O75394 65 aaKnown RBP0.35□□□□□ -2.35
MDM1-208ENST00000538454 CRIP1P50238 77 aa0.35□□□□□ -2.35
MDM1-208ENST00000538454 LINC00158P58513 81 aa0.35□□□□□ -2.35
MDM1-208ENST00000538454 THOC2Q8NI27 1593 aaKnown RBP0.35□□□□□ -2.35
MDM1-208ENST00000538454 WNK2Q9Y3S1 2297 aa0.35□□□□□ -2.35
MDM1-208ENST00000538454 HIVEP3Q5T1R4 2406 aa0.35□□□□□ -2.35
MDM1-208ENST00000538454 DEPDC5O75140 1603 aa0.35□□□□□ -2.35
MDM1-208ENST00000538454 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.35
MDM1-208ENST00000538454 LY75O60449 1722 aa0.34□□□□□ -2.36
MDM1-208ENST00000538454 DEFB114Q30KQ6 69 aa0.34□□□□□ -2.36
MDM1-208ENST00000538454 KMT2DO14686 5537 aa0.34□□□□□ -2.36
MDM1-208ENST00000538454 FAT4Q6V0I7 4981 aa0.34□□□□□ -2.36
MDM1-208ENST00000538454 ABCA10Q8WWZ4 1543 aa0.33□□□□□ -2.36
MDM1-208ENST00000538454 SMIM5Q71RC9 77 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms