RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
MDM1-208ENST00000538454 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
MDM1-208ENST00000538454 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
MDM1-208ENST00000538454 PHF23Q9BUL5 403 aaPredicted RBP25.82■■□□□ 1.72
MDM1-208ENST00000538454 FOXD1Q16676 465 aa24.29■■□□□ 1.48
MDM1-208ENST00000538454 PLPPR3Q6T4P5 718 aa23.67■■□□□ 1.38
MDM1-208ENST00000538454 PPP6R1Q9UPN7 881 aa22.95■■□□□ 1.26
MDM1-208ENST00000538454 ADRA2BP18089 450 aa22.93■■□□□ 1.26
MDM1-208ENST00000538454 PIAS4Q8N2W9 510 aaPredicted RBP22.81■■□□□ 1.24
MDM1-208ENST00000538454 MSH5O43196 834 aa22.61■■□□□ 1.21
MDM1-208ENST00000538454 POTEDQ86YR6 584 aa21.51■■□□□ 1.03
MDM1-208ENST00000538454 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
MDM1-208ENST00000538454 MAPK8IP2Q13387 824 aaPredicted RBP20.95■□□□□ 0.94
MDM1-208ENST00000538454 PPP4R3CPQ6ZMV5 832 aa20.81■□□□□ 0.92
MDM1-208ENST00000538454 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
MDM1-208ENST00000538454 CNKSR2Q8WXI2 1034 aa20.33■□□□□ 0.85
MDM1-208ENST00000538454 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
MDM1-208ENST00000538454 HOXD11P31277 338 aaPredicted RBP20.1■□□□□ 0.81
MDM1-208ENST00000538454 RNF216Q9NWF9 866 aaPredicted RBP20.05■□□□□ 0.8
MDM1-208ENST00000538454 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
MDM1-208ENST00000538454 NPM3O75607 178 aaKnown RBP19.81■□□□□ 0.76
MDM1-208ENST00000538454 KCNA4P22459 653 aa19.73■□□□□ 0.75
MDM1-208ENST00000538454 RNF39Q9H2S5 420 aa19.31■□□□□ 0.68
MDM1-208ENST00000538454 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
MDM1-208ENST00000538454 CACNB1Q02641 598 aaPredicted RBP19.22■□□□□ 0.67
MDM1-208ENST00000538454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.2■□□□□ 0.66
MDM1-208ENST00000538454 C1QBPQ07021 282 aaKnown RBP19.05■□□□□ 0.64
MDM1-208ENST00000538454 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
MDM1-208ENST00000538454 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
MDM1-208ENST00000538454 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
MDM1-208ENST00000538454 SPINK5Q9NQ38 1064 aaPredicted RBP18.45■□□□□ 0.54
MDM1-208ENST00000538454 CAPN15O75808 1086 aa18.42■□□□□ 0.54
MDM1-208ENST00000538454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.39■□□□□ 0.53
MDM1-208ENST00000538454 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
MDM1-208ENST00000538454 APLP2Q06481 763 aa18.34■□□□□ 0.53
MDM1-208ENST00000538454 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.52
MDM1-208ENST00000538454 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
MDM1-208ENST00000538454 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
MDM1-208ENST00000538454 TRHP20396 242 aaPredicted RBP18.21■□□□□ 0.51
MDM1-208ENST00000538454 DSG3P32926 999 aa18.2■□□□□ 0.5
MDM1-208ENST00000538454 ZNF219Q9P2Y4 722 aaPredicted RBP18.17■□□□□ 0.5
MDM1-208ENST00000538454 ZBTB22O15209 634 aa18.14■□□□□ 0.49
MDM1-208ENST00000538454 ABCB7O75027 752 aa18.04■□□□□ 0.48
MDM1-208ENST00000538454 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
MDM1-208ENST00000538454 POLA2Q14181 598 aa17.77■□□□□ 0.44
MDM1-208ENST00000538454 ATXN8OSP0DMR3 200 aa17.69■□□□□ 0.42
MDM1-208ENST00000538454 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
MDM1-208ENST00000538454 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
MDM1-208ENST00000538454 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
MDM1-208ENST00000538454 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
MDM1-208ENST00000538454 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
MDM1-208ENST00000538454 FBLN2P98095 1184 aa17.17■□□□□ 0.34
MDM1-208ENST00000538454 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
MDM1-208ENST00000538454 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
MDM1-208ENST00000538454 SPDYE2BA6NHP3 402 aa16.93■□□□□ 0.3
MDM1-208ENST00000538454 SPDYE6P0CI01 402 aa16.93■□□□□ 0.3
MDM1-208ENST00000538454 SPDYE2Q495Y8 402 aa16.93■□□□□ 0.3
MDM1-208ENST00000538454 POTEHQ6S545 545 aa16.92■□□□□ 0.3
MDM1-208ENST00000538454 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
MDM1-208ENST00000538454 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
MDM1-208ENST00000538454 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
MDM1-208ENST00000538454 SSUH2Q9Y2M2 353 aa16.72■□□□□ 0.27
MDM1-208ENST00000538454 PITPNM1O00562 1244 aa16.71■□□□□ 0.27
MDM1-208ENST00000538454 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
MDM1-208ENST00000538454 SPDYE1Q8NFV5 336 aaPredicted RBP16.56■□□□□ 0.24
MDM1-208ENST00000538454 CLEC11AQ9Y240 323 aa16.54■□□□□ 0.24
MDM1-208ENST00000538454 PIP4P2Q8N4L2 257 aa16.53■□□□□ 0.24
MDM1-208ENST00000538454 FXR2P51116 673 aaKnown RBP eCLIP16.47■□□□□ 0.23
MDM1-208ENST00000538454 SPDYE4A6NLX3 237 aa16.44■□□□□ 0.22
MDM1-208ENST00000538454 PRR29P0C7W0 189 aa16.29■□□□□ 0.2
MDM1-208ENST00000538454 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
MDM1-208ENST00000538454 CHADLQ6NUI6 762 aa16.18■□□□□ 0.18
MDM1-208ENST00000538454 HAX1O00165 279 aa16.16■□□□□ 0.18
MDM1-208ENST00000538454 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
MDM1-208ENST00000538454 PROM2Q8N271 834 aa16.05■□□□□ 0.16
MDM1-208ENST00000538454 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.16
MDM1-208ENST00000538454 FKBP8Q14318 412 aa15.98■□□□□ 0.15
MDM1-208ENST00000538454 EVX2Q03828 476 aa15.95■□□□□ 0.14
MDM1-208ENST00000538454 CREBZFQ9NS37 354 aa15.95■□□□□ 0.14
MDM1-208ENST00000538454 FARP1Q9Y4F1 1045 aaPredicted RBP15.95■□□□□ 0.14
MDM1-208ENST00000538454 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
MDM1-208ENST00000538454 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
MDM1-208ENST00000538454 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
MDM1-208ENST00000538454 MNX1P50219 401 aaPredicted RBP15.69■□□□□ 0.1
MDM1-208ENST00000538454 MIER1Q8N108 512 aa15.65■□□□□ 0.1
MDM1-208ENST00000538454 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
MDM1-208ENST00000538454 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
MDM1-208ENST00000538454 GABBR2O75899 941 aa15.62■□□□□ 0.09
MDM1-208ENST00000538454 PLCD3Q8N3E9 789 aa15.59■□□□□ 0.09
MDM1-208ENST00000538454 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.08
MDM1-208ENST00000538454 ZNF579Q8NAF0 562 aaKnown RBP15.55■□□□□ 0.08
MDM1-208ENST00000538454 FBXO3Q9UK99 471 aa15.53■□□□□ 0.08
MDM1-208ENST00000538454 CLCN6P51797 869 aa15.46■□□□□ 0.07
MDM1-208ENST00000538454 PHF12Q96QT6 1004 aa15.44■□□□□ 0.06
MDM1-208ENST00000538454 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
MDM1-208ENST00000538454 ZBTB47Q9UFB7 747 aaPredicted RBP15.42■□□□□ 0.06
MDM1-208ENST00000538454 RASEFQ8IZ41 740 aa15.36■□□□□ 0.05
MDM1-208ENST00000538454 VASPP50552 380 aaPredicted RBP15.35■□□□□ 0.05
MDM1-208ENST00000538454 GALR2O43603 387 aaPredicted RBP15.34■□□□□ 0.05
MDM1-208ENST00000538454 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms