RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 CCL18P55774 89 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 SNRPD3P62318 126 aaKnown RBP1.72□□□□□ -2.13
CASP4-208ENST00000530309 CIRBPQ14011 172 aaKnown RBP1.72□□□□□ -2.13
CASP4-208ENST00000530309 MINOS1Q5TGZ0 78 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 DEFB108BQ8NET1 73 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 WFDC9Q8NEX5 89 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 TMEM254Q8TBM7 123 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 LINC00467Q9BRT7 94 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 C11orf68Q9H3H3 251 aaKnown RBP1.72□□□□□ -2.13
CASP4-208ENST00000530309 PLAC8Q9NZF1 115 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 C5orf42Q9H799 3197 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 MED13Q9UHV7 2174 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 PRUNE2Q8WUY3 3088 aa1.72□□□□□ -2.13
CASP4-208ENST00000530309 COL6A3P12111 3177 aa1.71□□□□□ -2.13
CASP4-208ENST00000530309 VPS13AQ96RL7 3174 aa1.71□□□□□ -2.13
CASP4-208ENST00000530309 PRRC2CQ9Y520 2896 aaKnown RBP1.71□□□□□ -2.14
CASP4-208ENST00000530309 TRAV12-3A0A0B4J271 114 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 LOC101927531A0A1B0GV80 90 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 TRBV6-4A0A1B0GX49 114 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 ZZEF1O43149 2961 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 NDUFB3O43676 98 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 PDE6GP18545 87 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 RBM3P98179 157 aaKnown RBP1.71□□□□□ -2.14
CASP4-208ENST00000530309 Q5VV11 94 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 Q8N814 137 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 SNURFQ9Y675 71 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 SPEGQ15772 3267 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 CREBBPQ92793 2442 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 DNAJC13O75165 2243 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 WDFY3Q8IZQ1 3526 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 FRYLO94915 3013 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 CACNA1BQ00975 2339 aa1.71□□□□□ -2.14
CASP4-208ENST00000530309 TRIOO75962 3097 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 LAMA1P25391 3075 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 ABCA4P78363 2273 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 MYO15AQ9UKN7 3530 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 SMG1Q96Q15 3661 aaKnown RBP1.7□□□□□ -2.14
CASP4-208ENST00000530309 SPTBN2O15020 2390 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 REV3LO60673 3130 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 IGKV3-7A0A075B6H7 116 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.7□□□□□ -2.14
CASP4-208ENST00000530309 TRAV22A0A0B4J277 110 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 TMEM256-PLSCR3K7ERE1 68 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 MGPP08493 103 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 ROS1P08922 2347 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 DMDP11532 3685 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 ATP11AUNQ6ZP68 121 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 LCA10Q71F78 164 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 UBL5Q9BZL1 73 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 CDC42SE2Q9NRR3 84 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 ORMDL1Q9P0S3 153 aa1.7□□□□□ -2.14
CASP4-208ENST00000530309 KALRNO60229 2985 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 CACNA1HO95180 2353 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 SPTBN1Q01082 2364 aaKnown RBP1.69□□□□□ -2.14
CASP4-208ENST00000530309 KIAA0100Q14667 2235 aaKnown RBP1.69□□□□□ -2.14
CASP4-208ENST00000530309 TRBV6-8A0A0A6YYG3 113 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 NDUFA4O00483 81 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 S100A4P26447 101 aaKnown RBP1.69□□□□□ -2.14
CASP4-208ENST00000530309 DEFB1P60022 68 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 KRTAP10-4P60372 401 aaPredicted RBP1.69□□□□□ -2.14
CASP4-208ENST00000530309 NREPQ16612 68 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 LINC00575Q6W349 94 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 DYNLRB2Q8TF09 96 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 DIRC1Q969H9 104 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 TPRP12270 2363 aaKnown RBP1.69□□□□□ -2.14
CASP4-208ENST00000530309 C2CD3Q4AC94 2353 aa1.69□□□□□ -2.14
CASP4-208ENST00000530309 PTPRQQ9UMZ3 2332 aa1.68□□□□□ -2.14
CASP4-208ENST00000530309 TRBV10-1A0A0K0K1A3 114 aa1.68□□□□□ -2.14
CASP4-208ENST00000530309 ELOF1P60002 83 aaKnown RBP1.68□□□□□ -2.14
CASP4-208ENST00000530309 CNBPP62633 177 aaKnown RBP1.68□□□□□ -2.14
CASP4-208ENST00000530309 SPTA1P02549 2419 aa1.68□□□□□ -2.14
CASP4-208ENST00000530309 POLEQ07864 2286 aa1.68□□□□□ -2.14
CASP4-208ENST00000530309 CFAP47Q6ZTR5 3102 aa1.67□□□□□ -2.14
CASP4-208ENST00000530309 PCNX1Q96RV3 2341 aa1.67□□□□□ -2.14
CASP4-208ENST00000530309 SPENQ96T58 3664 aaKnown RBP1.67□□□□□ -2.14
CASP4-208ENST00000530309 ALMS1Q8TCU4 4167 aa1.67□□□□□ -2.14
CASP4-208ENST00000530309 H3BUA1 57 aa1.67□□□□□ -2.14
CASP4-208ENST00000530309 COX7B2Q8TF08 81 aa1.67□□□□□ -2.14
CASP4-208ENST00000530309 DEFB104AQ8WTQ1 72 aa1.67□□□□□ -2.14
CASP4-208ENST00000530309 CNOT1A5YKK6 2376 aaKnown RBP1.67□□□□□ -2.14
CASP4-208ENST00000530309 MAP1BP46821 2468 aaKnown RBP1.67□□□□□ -2.14
CASP4-208ENST00000530309 DOPEY2Q9Y3R5 2298 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 FLG2Q5D862 2391 aaPredicted RBP1.66□□□□□ -2.14
CASP4-208ENST00000530309 TACC2O95359 2948 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 G3V318 75 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 UBE2BP63146 152 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 PRB3Q04118 309 aaPredicted RBP1.66□□□□□ -2.14
CASP4-208ENST00000530309 ASB16-AS1Q495Z4 193 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 C5orf56Q8N8D9 126 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 USMG5Q96IX5 58 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 LIMD2Q9BT23 127 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 RHPN1-AS1Q9BWJ2 59 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 AKAP13Q12802 2813 aa1.66□□□□□ -2.14
CASP4-208ENST00000530309 ANKHD1Q8IWZ3 2542 aaKnown RBP1.66□□□□□ -2.14
CASP4-208ENST00000530309 DNAH1Q9P2D7 4330 aa1.65□□□□□ -2.14
CASP4-208ENST00000530309 CEP290O15078 2479 aa1.65□□□□□ -2.14
CASP4-208ENST00000530309 WNK1Q9H4A3 2382 aa1.65□□□□□ -2.14
CASP4-208ENST00000530309 PKDREJQ9NTG1 2253 aa1.65□□□□□ -2.14
CASP4-208ENST00000530309 CELSR3Q9NYQ7 3312 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms