RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 LINC01600Q96MT4 127 aa5.51□□□□□ -1.53
CTNND1-219ENST00000528621 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
CTNND1-219ENST00000528621 IGF2RP11717 2491 aa5.5□□□□□ -1.53
CTNND1-219ENST00000528621 A0A1W2PNN7 141 aa5.5□□□□□ -1.53
CTNND1-219ENST00000528621 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
CTNND1-219ENST00000528621 BPTFQ12830 3046 aa5.49□□□□□ -1.53
CTNND1-219ENST00000528621 CD164Q04900 197 aa5.48□□□□□ -1.53
CTNND1-219ENST00000528621 A8MUN3 132 aa5.48□□□□□ -1.53
CTNND1-219ENST00000528621 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
CTNND1-219ENST00000528621 PSORS1C2Q9UIG4 136 aa5.47□□□□□ -1.53
CTNND1-219ENST00000528621 CCDC168Q8NDH2 2452 aa5.47□□□□□ -1.53
CTNND1-219ENST00000528621 A0A0G2JQZ4 141 aa5.47□□□□□ -1.53
CTNND1-219ENST00000528621 CASC10Q5T4H9 136 aa5.47□□□□□ -1.53
CTNND1-219ENST00000528621 KRTAP1-1Q07627 177 aa5.46□□□□□ -1.54
CTNND1-219ENST00000528621 ANAPC11Q9NYG5 84 aa5.46□□□□□ -1.54
CTNND1-219ENST00000528621 IGLV5-48A0A075B6I7 105 aa5.45□□□□□ -1.54
CTNND1-219ENST00000528621 SMR3BP02814 79 aaPredicted RBP5.45□□□□□ -1.54
CTNND1-219ENST00000528621 ABCA2Q9BZC7 2435 aa5.45□□□□□ -1.54
CTNND1-219ENST00000528621 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
CTNND1-219ENST00000528621 CEP350Q5VT06 3117 aa5.44□□□□□ -1.54
CTNND1-219ENST00000528621 H7BZZ5 65 aa5.43□□□□□ -1.54
CTNND1-219ENST00000528621 A0A1W2PNM2 257 aa5.43□□□□□ -1.54
CTNND1-219ENST00000528621 FAM104AQ969W3 186 aa5.43□□□□□ -1.54
CTNND1-219ENST00000528621 MYO18BQ8IUG5 2567 aa5.43□□□□□ -1.54
CTNND1-219ENST00000528621 NCOR2Q9Y618 2525 aa5.42□□□□□ -1.54
CTNND1-219ENST00000528621 PCNTO95613 3336 aa5.42□□□□□ -1.54
CTNND1-219ENST00000528621 M0R2T5 61 aa5.42□□□□□ -1.54
CTNND1-219ENST00000528621 WIPF1O43516 503 aa5.4□□□□□ -1.55
CTNND1-219ENST00000528621 FN1P02751 2386 aaKnown RBP5.39□□□□□ -1.55
CTNND1-219ENST00000528621 UTRNP46939 3433 aa5.38□□□□□ -1.55
CTNND1-219ENST00000528621 FAM229BQ4G0N7 80 aa5.38□□□□□ -1.55
CTNND1-219ENST00000528621 Q6ZSA8 131 aa5.38□□□□□ -1.55
CTNND1-219ENST00000528621 USP9XQ93008 2570 aaPredicted RBP5.38□□□□□ -1.55
CTNND1-219ENST00000528621 CEP295Q9C0D2 2601 aa5.37□□□□□ -1.55
CTNND1-219ENST00000528621 SETD2Q9BYW2 2564 aaPredicted RBP5.37□□□□□ -1.55
CTNND1-219ENST00000528621 TLN2Q9Y4G6 2542 aa5.36□□□□□ -1.55
CTNND1-219ENST00000528621 Q8N1X5 172 aa5.35□□□□□ -1.55
CTNND1-219ENST00000528621 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
CTNND1-219ENST00000528621 MUC4Q99102 2169 aa5.35□□□□□ -1.55
CTNND1-219ENST00000528621 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
CTNND1-219ENST00000528621 Q1T7F1 81 aa5.34□□□□□ -1.55
CTNND1-219ENST00000528621 OCR1Q9BZK8 76 aa5.34□□□□□ -1.55
CTNND1-219ENST00000528621 LINC00483Q53H64 154 aa5.34□□□□□ -1.56
CTNND1-219ENST00000528621 USP9YO00507 2555 aaPredicted RBP5.34□□□□□ -1.56
CTNND1-219ENST00000528621 PRRC2CQ9Y520 2896 aaKnown RBP5.33□□□□□ -1.56
CTNND1-219ENST00000528621 TNP2Q05952 138 aa5.33□□□□□ -1.56
CTNND1-219ENST00000528621 ABCA12Q86UK0 2595 aa5.33□□□□□ -1.56
CTNND1-219ENST00000528621 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
CTNND1-219ENST00000528621 A0A0C4DFX4 3053 aa5.32□□□□□ -1.56
CTNND1-219ENST00000528621 LCA10Q71F78 164 aa5.32□□□□□ -1.56
CTNND1-219ENST00000528621 PLAC8Q9NZF1 115 aa5.32□□□□□ -1.56
CTNND1-219ENST00000528621 A0A0D9SG42 100 aa5.32□□□□□ -1.56
CTNND1-219ENST00000528621 IGLV7-46A0A075B6I9 117 aa5.31□□□□□ -1.56
CTNND1-219ENST00000528621 ANKRD11Q6UB99 2663 aaPredicted RBP5.31□□□□□ -1.56
CTNND1-219ENST00000528621 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.31□□□□□ -1.56
CTNND1-219ENST00000528621 HRES1P13985 223 aa5.3□□□□□ -1.56
CTNND1-219ENST00000528621 PRR26Q8N8Z3 221 aa5.3□□□□□ -1.56
CTNND1-219ENST00000528621 SPRR1AP35321 89 aa5.29□□□□□ -1.56
CTNND1-219ENST00000528621 PKD1L2Q7Z442 2459 aa5.29□□□□□ -1.56
CTNND1-219ENST00000528621 DOPEY1Q5JWR5 2465 aa5.29□□□□□ -1.56
CTNND1-219ENST00000528621 PIEZO1Q92508 2521 aa5.29□□□□□ -1.56
CTNND1-219ENST00000528621 CAMK2N1Q7Z7J9 78 aa5.28□□□□□ -1.56
CTNND1-219ENST00000528621 SPRR1BP22528 89 aa5.27□□□□□ -1.57
CTNND1-219ENST00000528621 C5orf42Q9H799 3197 aa5.26□□□□□ -1.57
CTNND1-219ENST00000528621 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
CTNND1-219ENST00000528621 Q75L30 129 aa5.26□□□□□ -1.57
CTNND1-219ENST00000528621 ZCCHC13Q8WW36 166 aaKnown RBP5.25□□□□□ -1.57
CTNND1-219ENST00000528621 JMJD1CQ15652 2540 aa5.25□□□□□ -1.57
CTNND1-219ENST00000528621 MMP24-AS1A0A0U1RRL7 71 aa5.25□□□□□ -1.57
CTNND1-219ENST00000528621 POLQO75417 2590 aa5.23□□□□□ -1.57
CTNND1-219ENST00000528621 CYSTM1Q9H1C7 97 aa5.23□□□□□ -1.57
CTNND1-219ENST00000528621 S4R3F8 94 aa5.23□□□□□ -1.57
CTNND1-219ENST00000528621 LINC01558Q9Y6Z2 57 aa5.22□□□□□ -1.57
CTNND1-219ENST00000528621 CHD7Q9P2D1 2997 aa5.21□□□□□ -1.57
CTNND1-219ENST00000528621 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.57
CTNND1-219ENST00000528621 A0A1B0GU33 70 aa5.21□□□□□ -1.58
CTNND1-219ENST00000528621 LRRK2Q5S007 2527 aa5.2□□□□□ -1.58
CTNND1-219ENST00000528621 ZNF462Q96JM2 2506 aa5.2□□□□□ -1.58
CTNND1-219ENST00000528621 Q5XG85 94 aa5.2□□□□□ -1.58
CTNND1-219ENST00000528621 MTORP42345 2549 aa5.2□□□□□ -1.58
CTNND1-219ENST00000528621 CHD8Q9HCK8 2581 aa5.2□□□□□ -1.58
CTNND1-219ENST00000528621 DMAC1Q96GE9 116 aa5.2□□□□□ -1.58
CTNND1-219ENST00000528621 Q8NDZ9 215 aa5.19□□□□□ -1.58
CTNND1-219ENST00000528621 LINC00472Q9H8W2 130 aa5.18□□□□□ -1.58
CTNND1-219ENST00000528621 ZFYVE26Q68DK2 2539 aa5.17□□□□□ -1.58
CTNND1-219ENST00000528621 SPTBN4Q9H254 2564 aa5.17□□□□□ -1.58
CTNND1-219ENST00000528621 KRTAP26-1Q6PEX3 210 aa5.16□□□□□ -1.58
CTNND1-219ENST00000528621 Q5W150 140 aa5.16□□□□□ -1.58
CTNND1-219ENST00000528621 CSAG1Q6PB30 78 aa5.16□□□□□ -1.58
CTNND1-219ENST00000528621 ANKRD17O75179 2603 aaKnown RBP5.15□□□□□ -1.59
CTNND1-219ENST00000528621 Q8N9P0 234 aaPredicted RBP5.14□□□□□ -1.59
CTNND1-219ENST00000528621 CR1P17927 2039 aa5.14□□□□□ -1.59
CTNND1-219ENST00000528621 OXTP01178 125 aa5.13□□□□□ -1.59
CTNND1-219ENST00000528621 FP248Q71RG6 208 aaPredicted RBP5.13□□□□□ -1.59
CTNND1-219ENST00000528621 HTTP42858 3142 aa5.13□□□□□ -1.59
CTNND1-219ENST00000528621 Q5VSD8 79 aa5.12□□□□□ -1.59
CTNND1-219ENST00000528621 ACANP16112 2415 aa5.11□□□□□ -1.59
CTNND1-219ENST00000528621 CHD9Q3L8U1 2897 aa5.11□□□□□ -1.59
CTNND1-219ENST00000528621 CFAP54Q96N23 3096 aa5.1□□□□□ -1.59
CTNND1-219ENST00000528621 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms