RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 MRPL55Q7Z7F7 128 aaKnown RBP8.54□□□□□ -1.04
CAPN1-212ENST00000527887 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
CAPN1-212ENST00000527887 LINC00158P58513 81 aa8.53□□□□□ -1.04
CAPN1-212ENST00000527887 A0A0B4J2C4 111 aa8.52□□□□□ -1.05
CAPN1-212ENST00000527887 A4D1N5 150 aa8.51□□□□□ -1.05
CAPN1-212ENST00000527887 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
CAPN1-212ENST00000527887 MIR7-3HGQ8N6C7 128 aa8.51□□□□□ -1.05
CAPN1-212ENST00000527887 NHP2Q9NX24 153 aaKnown RBP8.51□□□□□ -1.05
CAPN1-212ENST00000527887 BCE1O60756 84 aa8.5□□□□□ -1.05
CAPN1-212ENST00000527887 IGLV5-37A0A075B6J1 123 aa8.49□□□□□ -1.05
CAPN1-212ENST00000527887 TAX1BP3O14907 124 aa8.49□□□□□ -1.05
CAPN1-212ENST00000527887 CFC1BP0CG36 223 aa8.49□□□□□ -1.05
CAPN1-212ENST00000527887 CFC1P0CG37 223 aa8.49□□□□□ -1.05
CAPN1-212ENST00000527887 PFN2P35080 140 aa8.49□□□□□ -1.05
CAPN1-212ENST00000527887 NDUFC2O95298 119 aa8.48□□□□□ -1.05
CAPN1-212ENST00000527887 LINC00167Q96N53 147 aa8.48□□□□□ -1.05
CAPN1-212ENST00000527887 PRO1854Q9UHT4 67 aa8.48□□□□□ -1.05
CAPN1-212ENST00000527887 C9orf118A6NHY6 69 aa8.47□□□□□ -1.05
CAPN1-212ENST00000527887 DAND5Q8N907 189 aa8.47□□□□□ -1.05
CAPN1-212ENST00000527887 A0A0U1RRA0 63 aa8.46□□□□□ -1.06
CAPN1-212ENST00000527887 SOSTDC1Q6X4U4 206 aa8.46□□□□□ -1.06
CAPN1-212ENST00000527887 NKAPP1Q8N9T2 125 aa8.46□□□□□ -1.06
CAPN1-212ENST00000527887 TRAV13-2A0A0B4J235 113 aa8.45□□□□□ -1.06
CAPN1-212ENST00000527887 RAB37Q96AX2 223 aa8.45□□□□□ -1.06
CAPN1-212ENST00000527887 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
CAPN1-212ENST00000527887 EIF4EBP3O60516 100 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-212ENST00000527887 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
CAPN1-212ENST00000527887 CRYGAP11844 174 aa8.43□□□□□ -1.06
CAPN1-212ENST00000527887 LPAP08519 4548 aa8.42□□□□□ -1.06
CAPN1-212ENST00000527887 TRBV10-2A0A0K0K1G8 114 aa8.41□□□□□ -1.06
CAPN1-212ENST00000527887 GAGE10A6NGK3 116 aa8.41□□□□□ -1.06
CAPN1-212ENST00000527887 K7ERJ3 54 aa8.41□□□□□ -1.06
CAPN1-212ENST00000527887 UBE2AP49459 152 aa8.41□□□□□ -1.06
CAPN1-212ENST00000527887 NPC2P61916 151 aa8.41□□□□□ -1.06
CAPN1-212ENST00000527887 LYRM7Q5U5X0 104 aa8.41□□□□□ -1.06
CAPN1-212ENST00000527887 KRTAP13-1Q8IUC0 172 aa8.4□□□□□ -1.06
CAPN1-212ENST00000527887 IGKV2-28A0A075B6P5 120 aa8.39□□□□□ -1.07
CAPN1-212ENST00000527887 A0A1W2PPM0 123 aa8.39□□□□□ -1.07
CAPN1-212ENST00000527887 TSPAN13O95857 204 aa8.39□□□□□ -1.07
CAPN1-212ENST00000527887 IGKV2D-28P01615 120 aa8.39□□□□□ -1.07
CAPN1-212ENST00000527887 PRR4Q16378 134 aa8.39□□□□□ -1.07
CAPN1-212ENST00000527887 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
CAPN1-212ENST00000527887 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
CAPN1-212ENST00000527887 A0A087X002 238 aa8.38□□□□□ -1.07
CAPN1-212ENST00000527887 A0A1B0GV90 55 aa8.38□□□□□ -1.07
CAPN1-212ENST00000527887 H3BUT2 72 aa8.38□□□□□ -1.07
CAPN1-212ENST00000527887 VPREB1P12018 145 aa8.38□□□□□ -1.07
CAPN1-212ENST00000527887 FABP2P12104 132 aa8.38□□□□□ -1.07
CAPN1-212ENST00000527887 COX6CP09669 75 aa8.37□□□□□ -1.07
CAPN1-212ENST00000527887 TMEM126AQ9H061 195 aa8.37□□□□□ -1.07
CAPN1-212ENST00000527887 CBY1Q9Y3M2 126 aa8.37□□□□□ -1.07
CAPN1-212ENST00000527887 TRBV20-1A0A075B6N2 111 aa8.36□□□□□ -1.07
CAPN1-212ENST00000527887 VAMP3Q15836 100 aa8.35□□□□□ -1.07
CAPN1-212ENST00000527887 GTF2H5Q6ZYL4 71 aa8.35□□□□□ -1.07
CAPN1-212ENST00000527887 LINC00337Q8N6G1 96 aa8.35□□□□□ -1.07
CAPN1-212ENST00000527887 M0R378 163 aa8.33□□□□□ -1.08
CAPN1-212ENST00000527887 PSMB2P49721 201 aa8.33□□□□□ -1.08
CAPN1-212ENST00000527887 Q1RN00 199 aa8.33□□□□□ -1.08
CAPN1-212ENST00000527887 FAM19A1Q7Z5A9 133 aa8.33□□□□□ -1.08
CAPN1-212ENST00000527887 IGLV6-57P01721 117 aa8.32□□□□□ -1.08
CAPN1-212ENST00000527887 UBE2V1Q13404 147 aa8.32□□□□□ -1.08
CAPN1-212ENST00000527887 K7EP34 96 aa8.31□□□□□ -1.08
CAPN1-212ENST00000527887 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
CAPN1-212ENST00000527887 ANAPC11Q9NYG5 84 aa8.31□□□□□ -1.08
CAPN1-212ENST00000527887 H0YGX0 51 aa8.3□□□□□ -1.08
CAPN1-212ENST00000527887 TRIAP1O43715 76 aa8.3□□□□□ -1.08
CAPN1-212ENST00000527887 SCGB1C2P0DMR2 95 aa8.3□□□□□ -1.08
CAPN1-212ENST00000527887 PRLHP81277 87 aa8.3□□□□□ -1.08
CAPN1-212ENST00000527887 S100A7L2Q5SY68 101 aa8.3□□□□□ -1.08
CAPN1-212ENST00000527887 Q8NDZ9 215 aa8.3□□□□□ -1.08
CAPN1-212ENST00000527887 OR13C6PQ8NH95 151 aa8.3□□□□□ -1.08
CAPN1-212ENST00000527887 SPCS1Q9Y6A9 102 aa8.3□□□□□ -1.08
CAPN1-212ENST00000527887 H7C2G1 150 aa8.29□□□□□ -1.08
CAPN1-212ENST00000527887 LINC00304Q8N9R0 145 aa8.29□□□□□ -1.08
CAPN1-212ENST00000527887 SMIM11BQ8TCY0 68 aa8.29□□□□□ -1.08
CAPN1-212ENST00000527887 NAA38Q9BRA0 125 aaKnown RBP8.29□□□□□ -1.08
CAPN1-212ENST00000527887 MUC2Q02817 5179 aa8.27□□□□□ -1.09
CAPN1-212ENST00000527887 TRBV7-6A0A0J9YX20 115 aa8.27□□□□□ -1.09
CAPN1-212ENST00000527887 NCR3O14931 201 aa8.27□□□□□ -1.09
CAPN1-212ENST00000527887 ATXN8Q156A1 80 aa8.26□□□□□ -1.09
CAPN1-212ENST00000527887 A0A1B0GX51 115 aa8.25□□□□□ -1.09
CAPN1-212ENST00000527887 PRYO14603 147 aa8.25□□□□□ -1.09
CAPN1-212ENST00000527887 KCNQ1DNQ9H478 68 aa8.25□□□□□ -1.09
CAPN1-212ENST00000527887 ZNF706Q9Y5V0 76 aaPredicted RBP8.25□□□□□ -1.09
CAPN1-212ENST00000527887 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
CAPN1-212ENST00000527887 HIGD2AQ9BW72 106 aa8.24□□□□□ -1.09
CAPN1-212ENST00000527887 TRAV23DV6A0A075B6W5 121 aa8.23□□□□□ -1.09
CAPN1-212ENST00000527887 TRBV10-3A0A0K0K1G6 114 aa8.23□□□□□ -1.09
CAPN1-212ENST00000527887 A0A0U1RQV1 116 aa8.23□□□□□ -1.09
CAPN1-212ENST00000527887 F8W1H4 67 aa8.23□□□□□ -1.09
CAPN1-212ENST00000527887 LST1O00453 97 aa8.23□□□□□ -1.09
CAPN1-212ENST00000527887 SNCGO76070 127 aa8.23□□□□□ -1.09
CAPN1-212ENST00000527887 TCL1BO95988 128 aa8.23□□□□□ -1.09
CAPN1-212ENST00000527887 TRACP01848 142 aa8.23□□□□□ -1.09
CAPN1-212ENST00000527887 H3BMG7 143 aa8.22□□□□□ -1.09
CAPN1-212ENST00000527887 SPRR1AP35321 89 aa8.22□□□□□ -1.09
CAPN1-212ENST00000527887 SPRR4Q96PI1 79 aa8.22□□□□□ -1.09
CAPN1-212ENST00000527887 ZNF73O43830 326 aaPredicted RBP8.2□□□□□ -1.1
CAPN1-212ENST00000527887 TPRXLQ17RH7 258 aa8.2□□□□□ -1.1
CAPN1-212ENST00000527887 C6orf99Q4VX62 202 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms