RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 IBA57-AS1B1ANH7 110 aa4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 C9JAW5 83 aa4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 H3BNG1 76 aa4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 FOXI1Q12951 378 aa4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 ATXN8Q156A1 80 aa4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 C6orf226Q5I0X4 101 aa4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 C2orf82Q6UX34 121 aa4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 Q8IZM0 81 aa4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 CLEC2BQ92478 149 aa4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.67
CTNNA1-227ENST00000521387 IGKV2-28A0A075B6P5 120 aa4.64□□□□□ -1.67
CTNNA1-227ENST00000521387 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
CTNNA1-227ENST00000521387 COX7A2LO14548 114 aa4.64□□□□□ -1.67
CTNNA1-227ENST00000521387 SLC25A20O43772 301 aa4.64□□□□□ -1.67
CTNNA1-227ENST00000521387 IGKV2D-28P01615 120 aa4.64□□□□□ -1.67
CTNNA1-227ENST00000521387 PFN2P35080 140 aa4.64□□□□□ -1.67
CTNNA1-227ENST00000521387 ENHOQ6UWT2 76 aa4.64□□□□□ -1.67
CTNNA1-227ENST00000521387 KLK12Q9UKR0 248 aa4.64□□□□□ -1.67
CTNNA1-227ENST00000521387 M0QXV9 152 aa4.63□□□□□ -1.67
CTNNA1-227ENST00000521387 SLPIP03973 132 aa4.63□□□□□ -1.67
CTNNA1-227ENST00000521387 COX6CP09669 75 aa4.63□□□□□ -1.67
CTNNA1-227ENST00000521387 ANKRD29Q8N6D5 301 aa4.63□□□□□ -1.67
CTNNA1-227ENST00000521387 LINC00337Q8N6G1 96 aa4.63□□□□□ -1.67
CTNNA1-227ENST00000521387 SND1-IT1Q9HBX3 110 aa4.63□□□□□ -1.67
CTNNA1-227ENST00000521387 PRR34Q9NV39 138 aa4.63□□□□□ -1.67
CTNNA1-227ENST00000521387 TRBV10-2A0A0K0K1G8 114 aa4.62□□□□□ -1.67
CTNNA1-227ENST00000521387 LST1O00453 97 aa4.62□□□□□ -1.67
CTNNA1-227ENST00000521387 CFAP161Q6P656 301 aa4.62□□□□□ -1.67
CTNNA1-227ENST00000521387 TEN1Q86WV5 123 aa4.62□□□□□ -1.67
CTNNA1-227ENST00000521387 WFDC10BQ8IUB3 73 aa4.62□□□□□ -1.67
CTNNA1-227ENST00000521387 PPDPFLQ8WWR9 84 aa4.62□□□□□ -1.67
CTNNA1-227ENST00000521387 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 TRAV13-2A0A0B4J235 113 aa4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 PSCAO43653 123 aa4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 MALP21145 153 aa4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 CKS1BP61024 79 aa4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 C10orf25Q5T742 122 aa4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 KRTAP26-1Q6PEX3 210 aa4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 UNQ6190/PRO20217Q6UXQ8 127 aa4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 LINC00526Q96FQ7 95 aa4.61□□□□□ -1.67
CTNNA1-227ENST00000521387 J3QR89 54 aa4.6□□□□□ -1.67
CTNNA1-227ENST00000521387 CRPP02741 224 aa4.6□□□□□ -1.67
CTNNA1-227ENST00000521387 CXCL5P42830 114 aa4.6□□□□□ -1.67
CTNNA1-227ENST00000521387 RPL28P46779 137 aaKnown RBP4.6□□□□□ -1.67
CTNNA1-227ENST00000521387 SPAG11BQ08648 103 aa4.6□□□□□ -1.67
CTNNA1-227ENST00000521387 C9orf116Q5BN46 136 aaPredicted RBP4.6□□□□□ -1.67
CTNNA1-227ENST00000521387 SMIM11BQ8TCY0 68 aa4.6□□□□□ -1.67
CTNNA1-227ENST00000521387 UBE2WQ96B02 151 aa4.6□□□□□ -1.67
CTNNA1-227ENST00000521387 FAM218AQ96MZ4 157 aa4.6□□□□□ -1.67
CTNNA1-227ENST00000521387 H3BT86 120 aa4.59□□□□□ -1.67
CTNNA1-227ENST00000521387 PRR3P79522 188 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-227ENST00000521387 TRAV8-4A0A0B4J246 113 aa4.58□□□□□ -1.68
CTNNA1-227ENST00000521387 LECT2O14960 151 aa4.58□□□□□ -1.68
CTNNA1-227ENST00000521387 COX17Q14061 63 aa4.58□□□□□ -1.68
CTNNA1-227ENST00000521387 Q8NDZ9 215 aa4.58□□□□□ -1.68
CTNNA1-227ENST00000521387 OR13C6PQ8NH95 151 aa4.58□□□□□ -1.68
CTNNA1-227ENST00000521387 CDIP1Q9H305 208 aa4.58□□□□□ -1.68
CTNNA1-227ENST00000521387 TRACP01848 142 aa4.57□□□□□ -1.68
CTNNA1-227ENST00000521387 PCP4P48539 62 aa4.57□□□□□ -1.68
CTNNA1-227ENST00000521387 C22orf24Q9Y442 160 aa4.57□□□□□ -1.68
CTNNA1-227ENST00000521387 GVQW2A0A096LPI5 108 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 TEX49A0A1B0GTD5 131 aa4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 NDUFC2O95298 119 aa4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 BAALC-AS2P0C853 105 aa4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 HIGD2BQ4VC39 106 aa4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 LINC01556Q5JQF7 62 aa4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 SIGMAR1Q99720 223 aa4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 C6orf48Q9UBA6 75 aa4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 USH2AO75445 5202 aa4.56□□□□□ -1.68
CTNNA1-227ENST00000521387 A0A087WYN8 130 aa4.55□□□□□ -1.68
CTNNA1-227ENST00000521387 H0YGX0 51 aa4.55□□□□□ -1.68
CTNNA1-227ENST00000521387 NCR3O14931 201 aa4.55□□□□□ -1.68
CTNNA1-227ENST00000521387 C21orf62-AS1Q17RA5 79 aa4.55□□□□□ -1.68
CTNNA1-227ENST00000521387 C15orf56Q8N910 161 aa4.55□□□□□ -1.68
CTNNA1-227ENST00000521387 Q9HAA7 133 aa4.55□□□□□ -1.68
CTNNA1-227ENST00000521387 MACF1Q9UPN3 7388 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-227ENST00000521387 IGKV2D-24A0A075B6R9 120 aa4.53□□□□□ -1.68
CTNNA1-227ENST00000521387 ZNF561-AS1K7EIQ3 104 aa4.53□□□□□ -1.68
CTNNA1-227ENST00000521387 MT-ATP8P03928 68 aa4.52□□□□□ -1.69
CTNNA1-227ENST00000521387 C2orf48Q96LS8 159 aa4.52□□□□□ -1.69
CTNNA1-227ENST00000521387 CAMK2N2Q96S95 79 aa4.52□□□□□ -1.69
CTNNA1-227ENST00000521387 C1orf43Q9BWL3 253 aa4.52□□□□□ -1.69
CTNNA1-227ENST00000521387 TMEM126AQ9H061 195 aa4.52□□□□□ -1.69
CTNNA1-227ENST00000521387 RPL18AQ02543 176 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-227ENST00000521387 LINC00167Q96N53 147 aa4.51□□□□□ -1.69
CTNNA1-227ENST00000521387 XAGE1AQ9HD64 81 aa4.51□□□□□ -1.69
CTNNA1-227ENST00000521387 F8WDY8 70 aa4.5□□□□□ -1.69
CTNNA1-227ENST00000521387 IGLV6-57P01721 117 aa4.5□□□□□ -1.69
CTNNA1-227ENST00000521387 C6orf99Q4VX62 202 aa4.5□□□□□ -1.69
CTNNA1-227ENST00000521387 S100A7L2Q5SY68 101 aa4.5□□□□□ -1.69
CTNNA1-227ENST00000521387 C9orf129Q5T035 196 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-227ENST00000521387 DNAL4O96015 105 aa4.49□□□□□ -1.69
CTNNA1-227ENST00000521387 SCGB1A1P11684 91 aa4.49□□□□□ -1.69
CTNNA1-227ENST00000521387 VPREB1P12018 145 aa4.49□□□□□ -1.69
CTNNA1-227ENST00000521387 SYCNQ0VAF6 134 aa4.49□□□□□ -1.69
CTNNA1-227ENST00000521387 TRBV10-3A0A0K0K1G6 114 aa4.48□□□□□ -1.69
CTNNA1-227ENST00000521387 A0A1B0GX51 115 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms