RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 A0A1W2PNN7 141 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 TMEM218A2RU14 115 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 APOC3P02656 99 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 SRP19P09132 144 aaKnown RBP3.8□□□□□ -1.8
NPM1-205ENST00000518587 CXCL5P42830 114 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 UBE2BP63146 152 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 ADIRFQ15847 76 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 MRPL51Q4U2R6 128 aaKnown RBP3.8□□□□□ -1.8
NPM1-205ENST00000518587 Q5XG85 94 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 Q6ZUT4 128 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 LINC00526Q96FQ7 95 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 TMEM141Q96I45 108 aa3.8□□□□□ -1.8
NPM1-205ENST00000518587 TRAV9-1A0A075B6T8 112 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 KRTAP16-1A8MUX0 517 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 D6R8Y8 96 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 SERF1AO75920 110 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 DPM2O94777 84 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 C10orf91Q5T1B1 145 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 LYRM7Q5U5X0 104 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 CST9LQ9H4G1 147 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 TP73-AS1Q9UF72 201 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 PKHD1L1Q86WI1 4243 aa3.79□□□□□ -1.8
NPM1-205ENST00000518587 J3QQQ9 107 aa3.78□□□□□ -1.8
NPM1-205ENST00000518587 J3QR89 54 aa3.78□□□□□ -1.8
NPM1-205ENST00000518587 S100A2P29034 98 aa3.78□□□□□ -1.8
NPM1-205ENST00000518587 TMEM136Q6ZRR5 245 aa3.78□□□□□ -1.8
NPM1-205ENST00000518587 PHF5AQ7RTV0 110 aaKnown RBP3.78□□□□□ -1.8
NPM1-205ENST00000518587 PRR15Q8IV56 129 aa3.78□□□□□ -1.8
NPM1-205ENST00000518587 Q8IZM0 81 aa3.78□□□□□ -1.8
NPM1-205ENST00000518587 TOMM6Q96B49 74 aa3.78□□□□□ -1.8
NPM1-205ENST00000518587 LRP2P98164 4655 aa3.77□□□□□ -1.81
NPM1-205ENST00000518587 IGLV7-46A0A075B6I9 117 aa3.77□□□□□ -1.81
NPM1-205ENST00000518587 M0R143 59 aa3.77□□□□□ -1.81
NPM1-205ENST00000518587 ZNF861PO60384 105 aa3.77□□□□□ -1.81
NPM1-205ENST00000518587 RPL28P46779 137 aaKnown RBP3.77□□□□□ -1.81
NPM1-205ENST00000518587 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
NPM1-205ENST00000518587 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
NPM1-205ENST00000518587 PRELID3AQ96N28 172 aa3.77□□□□□ -1.81
NPM1-205ENST00000518587 OPRPNQ99935 248 aaPredicted RBP3.77□□□□□ -1.81
NPM1-205ENST00000518587 NXT2Q9NPJ8 142 aaKnown RBP3.77□□□□□ -1.81
NPM1-205ENST00000518587 C6orf48Q9UBA6 75 aa3.77□□□□□ -1.81
NPM1-205ENST00000518587 F8VRH5 84 aa3.76□□□□□ -1.81
NPM1-205ENST00000518587 MT-ND4LP03901 98 aa3.76□□□□□ -1.81
NPM1-205ENST00000518587 RPL39P62891 51 aaKnown RBP3.76□□□□□ -1.81
NPM1-205ENST00000518587 RNASE13Q5GAN3 156 aaKnown RBP3.76□□□□□ -1.81
NPM1-205ENST00000518587 PYY3Q5JQD4 70 aa3.76□□□□□ -1.81
NPM1-205ENST00000518587 MRPL54Q6P161 138 aaKnown RBP3.76□□□□□ -1.81
NPM1-205ENST00000518587 SFTA2Q6UW10 78 aa3.76□□□□□ -1.81
NPM1-205ENST00000518587 UNQ6190/PRO20217Q6UXQ8 127 aa3.76□□□□□ -1.81
NPM1-205ENST00000518587 KRTAP7-1Q8IUC3 87 aa3.76□□□□□ -1.81
NPM1-205ENST00000518587 Q8N8P6 123 aa3.76□□□□□ -1.81
NPM1-205ENST00000518587 SMCO4Q9NRQ5 59 aa3.76□□□□□ -1.81
NPM1-205ENST00000518587 COLCA2A8K830 154 aa3.75□□□□□ -1.81
NPM1-205ENST00000518587 NPYP01303 97 aa3.75□□□□□ -1.81
NPM1-205ENST00000518587 ZC2HC1BQ5TFG8 222 aa3.75□□□□□ -1.81
NPM1-205ENST00000518587 LCA10Q71F78 164 aa3.75□□□□□ -1.81
NPM1-205ENST00000518587 AMELXQ99217 191 aa3.75□□□□□ -1.81
NPM1-205ENST00000518587 SEC11CQ9BY50 192 aa3.75□□□□□ -1.81
NPM1-205ENST00000518587 BCE1O60756 84 aa3.74□□□□□ -1.81
NPM1-205ENST00000518587 TRGC2P03986 189 aa3.74□□□□□ -1.81
NPM1-205ENST00000518587 CRYGAP11844 174 aa3.74□□□□□ -1.81
NPM1-205ENST00000518587 SLC25A34Q6PIV7 304 aa3.74□□□□□ -1.81
NPM1-205ENST00000518587 ZNF73O43830 326 aaPredicted RBP3.73□□□□□ -1.81
NPM1-205ENST00000518587 KRTAP1-4P0C5Y4 121 aa3.73□□□□□ -1.81
NPM1-205ENST00000518587 FAM229BQ4G0N7 80 aa3.73□□□□□ -1.81
NPM1-205ENST00000518587 TNXBP22105 4242 aa3.72□□□□□ -1.81
NPM1-205ENST00000518587 FAM168BA1KXE4 195 aa3.72□□□□□ -1.81
NPM1-205ENST00000518587 H3BRM9 83 aa3.72□□□□□ -1.81
NPM1-205ENST00000518587 TAX1BP3O14907 124 aa3.72□□□□□ -1.81
NPM1-205ENST00000518587 C9orf129Q5T035 196 aaKnown RBP3.72□□□□□ -1.81
NPM1-205ENST00000518587 SNHG12Q9BXW3 62 aa3.72□□□□□ -1.81
NPM1-205ENST00000518587 C8orf17Q9NRJ1 99 aa3.72□□□□□ -1.81
NPM1-205ENST00000518587 TOMM7Q9P0U1 55 aa3.72□□□□□ -1.81
NPM1-205ENST00000518587 C22orf24Q9Y442 160 aa3.72□□□□□ -1.81
NPM1-205ENST00000518587 IGIPA6NJ69 53 aa3.71□□□□□ -1.82
NPM1-205ENST00000518587 M0R378 163 aa3.71□□□□□ -1.82
NPM1-205ENST00000518587 NMUP48645 174 aa3.71□□□□□ -1.82
NPM1-205ENST00000518587 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
NPM1-205ENST00000518587 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
NPM1-205ENST00000518587 C2orf82Q6UX34 121 aa3.71□□□□□ -1.82
NPM1-205ENST00000518587 Q8N377 158 aa3.71□□□□□ -1.82
NPM1-205ENST00000518587 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.82
NPM1-205ENST00000518587 TRBV7-6A0A0J9YX20 115 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 A0A1B0GW54 56 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 HIST1H2BOP23527 126 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 HIST1H2BBP33778 126 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 UBE2AP49459 152 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 HIST1H2BDP58876 126 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 HIST1H2BCP62807 126 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 COX17Q14061 63 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 HIST2H2BEQ16778 126 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.7□□□□□ -1.82
NPM1-205ENST00000518587 COL5A1-AS1Q5SY13 56 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 HIST1H2BHQ93079 126 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 SCGB3A1Q96QR1 104 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 HIST1H2BNQ99877 126 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 HIST1H2BMQ99879 126 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 CDKN2A-AS1Q9UH64 79 aa3.7□□□□□ -1.82
NPM1-205ENST00000518587 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
NPM1-205ENST00000518587 ADCYAP1P18509 176 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 242.8 ms