RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
PCDHGA1-202ENST00000517417 CUBNO60494 3623 aa7.41□□□□□ -1.22
PCDHGA1-202ENST00000517417 PRO0628Q9UI54 55 aa7.41□□□□□ -1.22
PCDHGA1-202ENST00000517417 RPS28P62857 69 aaKnown RBP7.4□□□□□ -1.22
PCDHGA1-202ENST00000517417 APCP25054 2843 aa7.4□□□□□ -1.22
PCDHGA1-202ENST00000517417 CIRBP-AS1Q8TBR5 109 aa7.4□□□□□ -1.22
PCDHGA1-202ENST00000517417 Q6ZVQ6 151 aa7.4□□□□□ -1.22
PCDHGA1-202ENST00000517417 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.23
PCDHGA1-202ENST00000517417 LINC01547P58512 204 aaPredicted RBP7.39□□□□□ -1.23
PCDHGA1-202ENST00000517417 Q9BRP9 147 aa7.39□□□□□ -1.23
PCDHGA1-202ENST00000517417 C22orf24Q9Y442 160 aa7.39□□□□□ -1.23
PCDHGA1-202ENST00000517417 C6orf48Q9UBA6 75 aa7.39□□□□□ -1.23
PCDHGA1-202ENST00000517417 A0A096LNT2 108 aa7.38□□□□□ -1.23
PCDHGA1-202ENST00000517417 LINC00208Q96KT6 92 aa7.38□□□□□ -1.23
PCDHGA1-202ENST00000517417 COL6A5A8TX70 2615 aa7.38□□□□□ -1.23
PCDHGA1-202ENST00000517417 NOTCH1P46531 2555 aa7.38□□□□□ -1.23
PCDHGA1-202ENST00000517417 C4orf26Q17RF5 130 aa7.38□□□□□ -1.23
PCDHGA1-202ENST00000517417 NDUFC1O43677 76 aa7.37□□□□□ -1.23
PCDHGA1-202ENST00000517417 Q8N9L7 120 aa7.37□□□□□ -1.23
PCDHGA1-202ENST00000517417 ZNF469Q96JG9 3925 aaPredicted RBP7.37□□□□□ -1.23
PCDHGA1-202ENST00000517417 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
PCDHGA1-202ENST00000517417 NF1P21359 2839 aa7.37□□□□□ -1.23
PCDHGA1-202ENST00000517417 TENM4Q6N022 2769 aa7.37□□□□□ -1.23
PCDHGA1-202ENST00000517417 GIG44P09565 113 aaPredicted RBP7.36□□□□□ -1.23
PCDHGA1-202ENST00000517417 Q8NAQ8 132 aa7.36□□□□□ -1.23
PCDHGA1-202ENST00000517417 ITPR2Q14571 2701 aa7.36□□□□□ -1.23
PCDHGA1-202ENST00000517417 IGHV6-1A0A0B4J1U7 121 aa7.35□□□□□ -1.23
PCDHGA1-202ENST00000517417 C1orf134Q5TEV5 83 aa7.35□□□□□ -1.23
PCDHGA1-202ENST00000517417 Q6ZQT0 140 aa7.35□□□□□ -1.23
PCDHGA1-202ENST00000517417 PRYO14603 147 aa7.34□□□□□ -1.23
PCDHGA1-202ENST00000517417 SMIM26A0A096LP01 95 aa7.34□□□□□ -1.23
PCDHGA1-202ENST00000517417 KIAA0087Q14695 138 aa7.34□□□□□ -1.23
PCDHGA1-202ENST00000517417 LINC00167Q96N53 147 aa7.34□□□□□ -1.23
PCDHGA1-202ENST00000517417 MDFIQ99750 246 aa7.34□□□□□ -1.24
PCDHGA1-202ENST00000517417 CSNK1G2-AS1Q8NCQ2 148 aa7.33□□□□□ -1.24
PCDHGA1-202ENST00000517417 F8WDY8 70 aa7.32□□□□□ -1.24
PCDHGA1-202ENST00000517417 OBSCN-AS1Q96MR7 158 aa7.32□□□□□ -1.24
PCDHGA1-202ENST00000517417 NBEAL1Q6ZS30 2694 aa7.32□□□□□ -1.24
PCDHGA1-202ENST00000517417 SPATA3Q8NHX4 192 aa7.32□□□□□ -1.24
PCDHGA1-202ENST00000517417 GCN1Q92616 2671 aaKnown RBP7.32□□□□□ -1.24
PCDHGA1-202ENST00000517417 ATP5EP56381 51 aaPredicted RBP7.31□□□□□ -1.24
PCDHGA1-202ENST00000517417 CXCL6P80162 114 aa7.31□□□□□ -1.24
PCDHGA1-202ENST00000517417 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
PCDHGA1-202ENST00000517417 LOC110117498A0A087WWA1 95 aa7.31□□□□□ -1.24
PCDHGA1-202ENST00000517417 RETNLBQ9BQ08 111 aa7.3□□□□□ -1.24
PCDHGA1-202ENST00000517417 A6NED7 52 aa7.29□□□□□ -1.24
PCDHGA1-202ENST00000517417 KRTAP1-3Q8IUG1 177 aa7.29□□□□□ -1.24
PCDHGA1-202ENST00000517417 PCOTHQ58A44 107 aa7.29□□□□□ -1.24
PCDHGA1-202ENST00000517417 C19orf73Q9NVV2 129 aa7.29□□□□□ -1.24
PCDHGA1-202ENST00000517417 LINC00588Q9Y4M8 146 aa7.29□□□□□ -1.24
PCDHGA1-202ENST00000517417 H3BNG1 76 aa7.28□□□□□ -1.24
PCDHGA1-202ENST00000517417 BCE1O60756 84 aa7.28□□□□□ -1.24
PCDHGA1-202ENST00000517417 TMEM254Q8TBM7 123 aa7.28□□□□□ -1.24
PCDHGA1-202ENST00000517417 CYSTM1Q9H1C7 97 aa7.27□□□□□ -1.25
PCDHGA1-202ENST00000517417 NBEAL2Q6ZNJ1 2754 aa7.27□□□□□ -1.25
PCDHGA1-202ENST00000517417 UNC79Q9P2D8 2635 aa7.27□□□□□ -1.25
PCDHGA1-202ENST00000517417 CR1P17927 2039 aa7.27□□□□□ -1.25
PCDHGA1-202ENST00000517417 BAHCC1Q9P281 2608 aa7.25□□□□□ -1.25
PCDHGA1-202ENST00000517417 TRBV7-6A0A0J9YX20 115 aa7.25□□□□□ -1.25
PCDHGA1-202ENST00000517417 IGLV6-57P01721 117 aa7.25□□□□□ -1.25
PCDHGA1-202ENST00000517417 TM2D3Q9BRN9 247 aa7.25□□□□□ -1.25
PCDHGA1-202ENST00000517417 CHTF8P0CG12 524 aa7.24□□□□□ -1.25
PCDHGA1-202ENST00000517417 Q6ZRP5 223 aa7.24□□□□□ -1.25
PCDHGA1-202ENST00000517417 PHF5AQ7RTV0 110 aaKnown RBP7.24□□□□□ -1.25
PCDHGA1-202ENST00000517417 ELOF1P60002 83 aaKnown RBP7.24□□□□□ -1.25
PCDHGA1-202ENST00000517417 ST20-AS1Q8NBB2 130 aa7.24□□□□□ -1.25
PCDHGA1-202ENST00000517417 NIPBLQ6KC79 2804 aaeCLIP7.24□□□□□ -1.25
PCDHGA1-202ENST00000517417 HCG22E2RYF7 251 aa7.23□□□□□ -1.25
PCDHGA1-202ENST00000517417 KRTAP10-3P60369 221 aa7.23□□□□□ -1.25
PCDHGA1-202ENST00000517417 H0Y9P7 68 aa7.22□□□□□ -1.25
PCDHGA1-202ENST00000517417 PSPHP1O15172 72 aa7.22□□□□□ -1.25
PCDHGA1-202ENST00000517417 KRTAP1-1Q07627 177 aa7.22□□□□□ -1.25
PCDHGA1-202ENST00000517417 LINC00612Q8N6U2 182 aa7.21□□□□□ -1.25
PCDHGA1-202ENST00000517417 MOBPQ13875 183 aa7.21□□□□□ -1.25
PCDHGA1-202ENST00000517417 Q6ZRX8 168 aa7.21□□□□□ -1.25
PCDHGA1-202ENST00000517417 SMIM29Q86T20 159 aa7.21□□□□□ -1.25
PCDHGA1-202ENST00000517417 FAM168BA1KXE4 195 aa7.21□□□□□ -1.26
PCDHGA1-202ENST00000517417 KRTAP10-11P60412 298 aa7.2□□□□□ -1.26
PCDHGA1-202ENST00000517417 H7BZZ5 65 aa7.2□□□□□ -1.26
PCDHGA1-202ENST00000517417 NBDYA0A0U1RRE5 68 aa7.2□□□□□ -1.26
PCDHGA1-202ENST00000517417 VPREB1P12018 145 aa7.19□□□□□ -1.26
PCDHGA1-202ENST00000517417 GVQW2A0A096LPI5 108 aaPredicted RBP7.19□□□□□ -1.26
PCDHGA1-202ENST00000517417 PDZD2O15018 2839 aa7.19□□□□□ -1.26
PCDHGA1-202ENST00000517417 SPINK1P00995 79 aa7.18□□□□□ -1.26
PCDHGA1-202ENST00000517417 KLKP1Q107X0 134 aa7.18□□□□□ -1.26
PCDHGA1-202ENST00000517417 LINC00476Q8WZB0 136 aa7.18□□□□□ -1.26
PCDHGA1-202ENST00000517417 NSD1Q96L73 2696 aaPredicted RBP7.18□□□□□ -1.26
PCDHGA1-202ENST00000517417 EPM2AB3EWF7 344 aa7.18□□□□□ -1.26
PCDHGA1-202ENST00000517417 PRR15LQ9BU68 103 aa7.18□□□□□ -1.26
PCDHGA1-202ENST00000517417 DNAH10OSP0CZ25 163 aa7.18□□□□□ -1.26
PCDHGA1-202ENST00000517417 SERTAD4-AS1Q5TG53 156 aa7.17□□□□□ -1.26
PCDHGA1-202ENST00000517417 Q8NBF4 154 aa7.17□□□□□ -1.26
PCDHGA1-202ENST00000517417 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
PCDHGA1-202ENST00000517417 KMT2BQ9UMN6 2715 aaPredicted RBP7.17□□□□□ -1.26
PCDHGA1-202ENST00000517417 C16orf90A8MZG2 172 aa7.16□□□□□ -1.26
PCDHGA1-202ENST00000517417 K7EIL1 84 aa7.16□□□□□ -1.26
PCDHGA1-202ENST00000517417 Q8NDZ9 215 aa7.16□□□□□ -1.26
PCDHGA1-202ENST00000517417 TRBV7-4A0A0J9YYF1 115 aa7.16□□□□□ -1.26
PCDHGA1-202ENST00000517417 C1orf64Q8NEQ6 169 aa7.16□□□□□ -1.26
PCDHGA1-202ENST00000517417 K7ERS5 55 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms