RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 KANTRA0A1W2PQU2 76 aa-0.21□□□□□ -2.44
RNU2-53P-201ENST00000516257 NDUFB1O75438 58 aa-0.21□□□□□ -2.44
RNU2-53P-201ENST00000516257 APC2O95996 2303 aa-0.21□□□□□ -2.44
RNU2-53P-201ENST00000516257 POLR1AO95602 1720 aaPredicted RBP-0.21□□□□□ -2.44
RNU2-53P-201ENST00000516257 TIAM2Q8IVF5 1701 aa-0.21□□□□□ -2.44
RNU2-53P-201ENST00000516257 CHD8Q9HCK8 2581 aa-0.22□□□□□ -2.44
RNU2-53P-201ENST00000516257 ATRQ13535 2644 aa-0.22□□□□□ -2.44
RNU2-53P-201ENST00000516257 RB1CC1Q8TDY2 1594 aa-0.22□□□□□ -2.44
RNU2-53P-201ENST00000516257 USP32Q8NFA0 1604 aa-0.22□□□□□ -2.44
RNU2-53P-201ENST00000516257 TDRG1Q3Y452 100 aa-0.22□□□□□ -2.44
RNU2-53P-201ENST00000516257 URB2Q14146 1524 aaKnown RBP-0.23□□□□□ -2.45
RNU2-53P-201ENST00000516257 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.23□□□□□ -2.45
RNU2-53P-201ENST00000516257 LTN1O94822 1766 aa-0.23□□□□□ -2.45
RNU2-53P-201ENST00000516257 NDUFA3O95167 84 aa-0.23□□□□□ -2.45
RNU2-53P-201ENST00000516257 CICQ96RK0 1608 aaPredicted RBP-0.24□□□□□ -2.45
RNU2-53P-201ENST00000516257 PTPN23Q9H3S7 1636 aa-0.24□□□□□ -2.45
RNU2-53P-201ENST00000516257 NSD1Q96L73 2696 aaPredicted RBP-0.24□□□□□ -2.45
RNU2-53P-201ENST00000516257 NCOA2Q15596 1464 aa-0.24□□□□□ -2.45
RNU2-53P-201ENST00000516257 MAP1BP46821 2468 aaKnown RBP-0.24□□□□□ -2.45
RNU2-53P-201ENST00000516257 ADAMTS12P58397 1594 aa-0.24□□□□□ -2.45
RNU2-53P-201ENST00000516257 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.24□□□□□ -2.45
RNU2-53P-201ENST00000516257 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
RNU2-53P-201ENST00000516257 MED14O60244 1454 aa-0.25□□□□□ -2.45
RNU2-53P-201ENST00000516257 MAGI3Q5TCQ9 1506 aa-0.25□□□□□ -2.45
RNU2-53P-201ENST00000516257 NWD1Q149M9 1564 aa-0.25□□□□□ -2.45
RNU2-53P-201ENST00000516257 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.25□□□□□ -2.45
RNU2-53P-201ENST00000516257 COL6A3P12111 3177 aa-0.25□□□□□ -2.45
RNU2-53P-201ENST00000516257 C4AP0C0L4 1744 aa-0.26□□□□□ -2.45
RNU2-53P-201ENST00000516257 C4BP0C0L5 1744 aa-0.26□□□□□ -2.45
RNU2-53P-201ENST00000516257 DOT1LQ8TEK3 1739 aa-0.26□□□□□ -2.45
RNU2-53P-201ENST00000516257 SPRR2AP35326 72 aa-0.26□□□□□ -2.45
RNU2-53P-201ENST00000516257 DCHS2Q6V1P9 2916 aa-0.26□□□□□ -2.45
RNU2-53P-201ENST00000516257 STAB1Q9NY15 2570 aa-0.26□□□□□ -2.45
RNU2-53P-201ENST00000516257 ZNF831Q5JPB2 1677 aa-0.27□□□□□ -2.45
RNU2-53P-201ENST00000516257 ACANP16112 2415 aa-0.27□□□□□ -2.45
RNU2-53P-201ENST00000516257 PCNX1Q96RV3 2341 aa-0.27□□□□□ -2.45
RNU2-53P-201ENST00000516257 ST20Q9HBF5 79 aa-0.27□□□□□ -2.45
RNU2-53P-201ENST00000516257 PIK3C2BO00750 1634 aa-0.27□□□□□ -2.45
RNU2-53P-201ENST00000516257 NESP48681 1621 aa-0.27□□□□□ -2.45
RNU2-53P-201ENST00000516257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 FLNBO75369 2602 aaKnown RBP-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 FLNAP21333 2647 aaKnown RBP-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 UMAD1C9J7I0 102 aa-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 H0YGG7 62 aa-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 C3orf79P0CE67 100 aa-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 ADIRFQ15847 76 aa-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 KRTAP6-2Q3LI66 62 aa-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 ATP5EP2Q5VTU8 51 aa-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 S100A13Q99584 98 aa-0.28□□□□□ -2.45
RNU2-53P-201ENST00000516257 CCDC88BA6NC98 1476 aa-0.29□□□□□ -2.46
RNU2-53P-201ENST00000516257 PKHD1P08F94 4074 aa-0.29□□□□□ -2.46
RNU2-53P-201ENST00000516257 IFI27P40305 119 aaPredicted RBP-0.29□□□□□ -2.46
RNU2-53P-201ENST00000516257 PRO3102Q9H379 93 aa-0.29□□□□□ -2.46
RNU2-53P-201ENST00000516257 DIP2BQ9P265 1576 aa-0.29□□□□□ -2.46
RNU2-53P-201ENST00000516257 CCDC18Q5T9S5 1454 aa-0.29□□□□□ -2.46
RNU2-53P-201ENST00000516257 ARFGEF2Q9Y6D5 1785 aa-0.29□□□□□ -2.46
RNU2-53P-201ENST00000516257 CNOT1A5YKK6 2376 aaKnown RBP-0.3□□□□□ -2.46
RNU2-53P-201ENST00000516257 SVEP1Q4LDE5 3571 aa-0.3□□□□□ -2.46
RNU2-53P-201ENST00000516257 LCE6AA0A183 80 aa-0.3□□□□□ -2.46
RNU2-53P-201ENST00000516257 IFI6P09912 130 aa-0.3□□□□□ -2.46
RNU2-53P-201ENST00000516257 KRTAP19-7Q3SYF9 63 aa-0.3□□□□□ -2.46
RNU2-53P-201ENST00000516257 DEFB121Q5J5C9 76 aa-0.3□□□□□ -2.46
RNU2-53P-201ENST00000516257 SETXQ7Z333 2677 aaKnown RBP-0.3□□□□□ -2.46
RNU2-53P-201ENST00000516257 DCAF1Q9Y4B6 1507 aa-0.31□□□□□ -2.46
RNU2-53P-201ENST00000516257 LINC00158P58513 81 aa-0.31□□□□□ -2.46
RNU2-53P-201ENST00000516257 FLGP20930 4061 aaPredicted RBP-0.31□□□□□ -2.46
RNU2-53P-201ENST00000516257 REV3LO60673 3130 aa-0.31□□□□□ -2.46
RNU2-53P-201ENST00000516257 PLXNC1O60486 1568 aa-0.32□□□□□ -2.46
RNU2-53P-201ENST00000516257 WIZO95785 1651 aa-0.32□□□□□ -2.46
RNU2-53P-201ENST00000516257 ERVK-7P63135 1459 aa-0.32□□□□□ -2.46
RNU2-53P-201ENST00000516257 DSTQ03001 7570 aaKnown RBP-0.32□□□□□ -2.46
RNU2-53P-201ENST00000516257 KNL1Q8NG31 2342 aa-0.32□□□□□ -2.46
RNU2-53P-201ENST00000516257 ABCC1P33527 1531 aa-0.33□□□□□ -2.46
RNU2-53P-201ENST00000516257 KDM5DQ9BY66 1539 aa-0.33□□□□□ -2.46
RNU2-53P-201ENST00000516257 H3BUT2 72 aa-0.33□□□□□ -2.46
RNU2-53P-201ENST00000516257 SPRR2EP22531 72 aa-0.33□□□□□ -2.46
RNU2-53P-201ENST00000516257 NREPQ16612 68 aa-0.33□□□□□ -2.46
RNU2-53P-201ENST00000516257 DEPDC5O75140 1603 aa-0.34□□□□□ -2.46
RNU2-53P-201ENST00000516257 A0A087WXM4 84 aa-0.34□□□□□ -2.46
RNU2-53P-201ENST00000516257 NDUFA4O00483 81 aa-0.34□□□□□ -2.46
RNU2-53P-201ENST00000516257 HMGA1P17096 107 aaKnown RBP-0.34□□□□□ -2.46
RNU2-53P-201ENST00000516257 BVES-AS1Q5T3Y7 98 aa-0.34□□□□□ -2.46
RNU2-53P-201ENST00000516257 TENM2Q9NT68 2774 aa-0.34□□□□□ -2.46
RNU2-53P-201ENST00000516257 SRRM2Q9UQ35 2752 aaKnown RBP-0.34□□□□□ -2.46
RNU2-53P-201ENST00000516257 ARHGAP35Q9NRY4 1499 aa-0.35□□□□□ -2.46
RNU2-53P-201ENST00000516257 SMIM13P0DJ93 91 aa-0.35□□□□□ -2.47
RNU2-53P-201ENST00000516257 CFAP43Q8NDM7 1665 aa-0.35□□□□□ -2.47
RNU2-53P-201ENST00000516257 CFAP74Q9C0B2 1584 aa-0.36□□□□□ -2.47
RNU2-53P-201ENST00000516257 PLCH1Q4KWH8 1693 aa-0.36□□□□□ -2.47
RNU2-53P-201ENST00000516257 H0YAA0 97 aa-0.36□□□□□ -2.47
RNU2-53P-201ENST00000516257 DDX60LQ5H9U9 1706 aaKnown RBP-0.36□□□□□ -2.47
RNU2-53P-201ENST00000516257 SCN11AQ9UI33 1791 aa-0.37□□□□□ -2.47
RNU2-53P-201ENST00000516257 LYNX1G3V0Z9 82 aa-0.37□□□□□ -2.47
RNU2-53P-201ENST00000516257 DEFA5Q01523 94 aa-0.38□□□□□ -2.47
RNU2-53P-201ENST00000516257 LYSTQ99698 3801 aa-0.38□□□□□ -2.47
RNU2-53P-201ENST00000516257 RICTORQ6R327 1708 aa-0.38□□□□□ -2.47
RNU2-53P-201ENST00000516257 ANKRD50Q9ULJ7 1429 aa-0.38□□□□□ -2.47
RNU2-53P-201ENST00000516257 PDE4DIPQ5VU43 2346 aa-0.39□□□□□ -2.47
RNU2-53P-201ENST00000516257 C18orf32Q8TCD1 76 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms