RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 COX7BP24311 80 aa-0.6□□□□□ -2.51
NEDD4-211ENST00000514893 NEBP20929 6669 aa-0.6□□□□□ -2.51
NEDD4-211ENST00000514893 DNAH6Q9C0G6 4158 aa-0.6□□□□□ -2.51
NEDD4-211ENST00000514893 LRRC9Q6ZRR7 1453 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 MAGI2Q86UL8 1455 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 TEP1Q99973 2627 aaKnown RBP-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 CNTLNQ9NXG0 1405 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 IQCF6A8MYZ5 107 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 MT4P47944 62 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 HMGN3Q15651 99 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 GAFA1Q96PS6 74 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 LYSTQ99698 3801 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 FAT1Q14517 4588 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 KALRNO60229 2985 aa-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 GCN1Q92616 2671 aaKnown RBP-0.61□□□□□ -2.51
NEDD4-211ENST00000514893 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.62□□□□□ -2.51
NEDD4-211ENST00000514893 ZZEF1O43149 2961 aa-0.62□□□□□ -2.51
NEDD4-211ENST00000514893 AKAP9Q99996 3911 aa-0.62□□□□□ -2.51
NEDD4-211ENST00000514893 ANKRD50Q9ULJ7 1429 aa-0.62□□□□□ -2.51
NEDD4-211ENST00000514893 ALKAL2Q6UX46 152 aa-0.62□□□□□ -2.51
NEDD4-211ENST00000514893 UBE2D4Q9Y2X8 147 aa-0.62□□□□□ -2.51
NEDD4-211ENST00000514893 HERC2O95714 4834 aa-0.62□□□□□ -2.51
NEDD4-211ENST00000514893 ALKQ9UM73 1620 aa-0.63□□□□□ -2.51
NEDD4-211ENST00000514893 A0A1B0GUT8 65 aa-0.63□□□□□ -2.51
NEDD4-211ENST00000514893 CYB5AP00167 134 aa-0.63□□□□□ -2.51
NEDD4-211ENST00000514893 RBP2P50120 134 aa-0.63□□□□□ -2.51
NEDD4-211ENST00000514893 WFDC9Q8NEX5 89 aa-0.63□□□□□ -2.51
NEDD4-211ENST00000514893 C14orf144Q96I85 54 aa-0.63□□□□□ -2.51
NEDD4-211ENST00000514893 DPY30Q9C005 99 aa-0.63□□□□□ -2.51
NEDD4-211ENST00000514893 PDE4DIPQ5VU43 2346 aa-0.63□□□□□ -2.51
NEDD4-211ENST00000514893 MYH4Q9Y623 1939 aa-0.64□□□□□ -2.51
NEDD4-211ENST00000514893 WDR87Q6ZQQ6 2873 aa-0.64□□□□□ -2.51
NEDD4-211ENST00000514893 PEA15Q15121 130 aa-0.64□□□□□ -2.51
NEDD4-211ENST00000514893 PLGLAQ15195 96 aa-0.64□□□□□ -2.51
NEDD4-211ENST00000514893 NCMAPQ5T1S8 102 aa-0.64□□□□□ -2.51
NEDD4-211ENST00000514893 SPRR2FQ96RM1 72 aa-0.64□□□□□ -2.51
NEDD4-211ENST00000514893 SUPT6HQ7KZ85 1726 aaKnown RBP-0.64□□□□□ -2.51
NEDD4-211ENST00000514893 SCN11AQ9UI33 1791 aa-0.65□□□□□ -2.51
NEDD4-211ENST00000514893 USH2AO75445 5202 aa-0.65□□□□□ -2.51
NEDD4-211ENST00000514893 STARD9Q9P2P6 4700 aa-0.65□□□□□ -2.51
NEDD4-211ENST00000514893 TEX14Q8IWB6 1497 aa-0.65□□□□□ -2.51
NEDD4-211ENST00000514893 RGPD1P0DJD0 1748 aa-0.65□□□□□ -2.51
NEDD4-211ENST00000514893 RGPD8O14715 1765 aaPredicted RBP-0.65□□□□□ -2.51
NEDD4-211ENST00000514893 RGPD5Q99666 1765 aa-0.65□□□□□ -2.51
NEDD4-211ENST00000514893 MYO18BQ8IUG5 2567 aa-0.66□□□□□ -2.51
NEDD4-211ENST00000514893 MYO3AQ8NEV4 1616 aa-0.66□□□□□ -2.51
NEDD4-211ENST00000514893 HMGN2P05204 90 aaKnown RBP-0.66□□□□□ -2.52
NEDD4-211ENST00000514893 SMIM11AP58511 58 aa-0.66□□□□□ -2.52
NEDD4-211ENST00000514893 UTP20O75691 2785 aaKnown RBP-0.66□□□□□ -2.52
NEDD4-211ENST00000514893 DNAH3Q8TD57 4116 aa-0.66□□□□□ -2.52
NEDD4-211ENST00000514893 ATP10BO94823 1461 aa-0.67□□□□□ -2.52
NEDD4-211ENST00000514893 EPRSP07814 1512 aaKnown RBP-0.67□□□□□ -2.52
NEDD4-211ENST00000514893 DEFA5Q01523 94 aa-0.67□□□□□ -2.52
NEDD4-211ENST00000514893 UBR4Q5T4S7 5183 aa-0.67□□□□□ -2.52
NEDD4-211ENST00000514893 TIAM2Q8IVF5 1701 aa-0.67□□□□□ -2.52
NEDD4-211ENST00000514893 PKHD1L1Q86WI1 4243 aa-0.67□□□□□ -2.52
NEDD4-211ENST00000514893 FANCAO15360 1455 aa-0.67□□□□□ -2.52
NEDD4-211ENST00000514893 AKAP12Q02952 1782 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 M0R143 59 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 POLR1AO95602 1720 aaPredicted RBP-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 MT1AP04731 61 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 COX6B2Q6YFQ2 88 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 ACBD7Q8N6N7 88 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 PRO3102Q9H379 93 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 ANKRD26Q9UPS8 1709 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 RGPD3A6NKT7 1758 aaPredicted RBP-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 RGPD4Q7Z3J3 1758 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 USP32Q8NFA0 1604 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 ATP7BP35670 1465 aa-0.68□□□□□ -2.52
NEDD4-211ENST00000514893 FAT3Q8TDW7 4589 aa-0.69□□□□□ -2.52
NEDD4-211ENST00000514893 UBR1Q8IWV7 1749 aa-0.69□□□□□ -2.52
NEDD4-211ENST00000514893 PEG3Q9GZU2 1588 aa-0.69□□□□□ -2.52
NEDD4-211ENST00000514893 TRAV21A0A0B4J279 112 aa-0.69□□□□□ -2.52
NEDD4-211ENST00000514893 LINC00158P58513 81 aa-0.69□□□□□ -2.52
NEDD4-211ENST00000514893 NESP48681 1621 aa-0.69□□□□□ -2.52
NEDD4-211ENST00000514893 LAMA1P25391 3075 aa-0.69□□□□□ -2.52
NEDD4-211ENST00000514893 DOPEY1Q5JWR5 2465 aa-0.7□□□□□ -2.52
NEDD4-211ENST00000514893 LTN1O94822 1766 aa-0.7□□□□□ -2.52
NEDD4-211ENST00000514893 LRRK2Q5S007 2527 aa-0.7□□□□□ -2.52
NEDD4-211ENST00000514893 C9orf92A6NGG3 77 aa-0.7□□□□□ -2.52
NEDD4-211ENST00000514893 DNAH9Q9NYC9 4486 aa-0.7□□□□□ -2.52
NEDD4-211ENST00000514893 CUBNO60494 3623 aa-0.7□□□□□ -2.52
NEDD4-211ENST00000514893 DSPP15924 2871 aaKnown RBP-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 NBEAQ8NFP9 2946 aa-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 MTORP42345 2549 aa-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 MGAM2Q2M2H8 2515 aa-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 GYPAP02724 150 aa-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 ACYP1P07311 99 aa-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 C20orf78Q9BR46 151 aa-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 NEXMIFQ5QGS0 1516 aa-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 NWD1Q149M9 1564 aa-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 PLIN4Q96Q06 1357 aa-0.71□□□□□ -2.52
NEDD4-211ENST00000514893 ABCC10Q5T3U5 1492 aa-0.72□□□□□ -2.52
NEDD4-211ENST00000514893 VPS13BQ7Z7G8 4022 aa-0.72□□□□□ -2.52
NEDD4-211ENST00000514893 PLXNC1O60486 1568 aa-0.73□□□□□ -2.53
NEDD4-211ENST00000514893 MYMXA0A1B0GTQ4 84 aa-0.73□□□□□ -2.53
NEDD4-211ENST00000514893 C3orf79P0CE67 100 aa-0.73□□□□□ -2.53
NEDD4-211ENST00000514893 S4R3F8 94 aa-0.73□□□□□ -2.53
NEDD4-211ENST00000514893 DOT1LQ8TEK3 1739 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 270.2 ms