RNA–Protein interactions for RNA: ENST00000514152.5

SH3D19-210, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SH3D19, Length 5,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-210ENST00000514152 FAM168BA1KXE4 195 aa4.73□□□□□ -1.65
SH3D19-210ENST00000514152 PHF5AQ7RTV0 110 aaKnown RBP4.73□□□□□ -1.65
SH3D19-210ENST00000514152 LINC00612Q8N6U2 182 aa4.73□□□□□ -1.65
SH3D19-210ENST00000514152 LINC00483Q53H64 154 aa4.73□□□□□ -1.65
SH3D19-210ENST00000514152 IGF2RP11717 2491 aa4.73□□□□□ -1.65
SH3D19-210ENST00000514152 C5orf42Q9H799 3197 aa4.73□□□□□ -1.65
SH3D19-210ENST00000514152 NAV2Q8IVL1 2488 aa4.73□□□□□ -1.65
SH3D19-210ENST00000514152 PTPN13Q12923 2485 aa4.72□□□□□ -1.65
SH3D19-210ENST00000514152 A0A096LNT2 108 aa4.72□□□□□ -1.65
SH3D19-210ENST00000514152 C15orf56Q8N910 161 aa4.72□□□□□ -1.65
SH3D19-210ENST00000514152 ASB16-AS1Q495Z4 193 aa4.71□□□□□ -1.65
SH3D19-210ENST00000514152 GIG44P09565 113 aaPredicted RBP4.71□□□□□ -1.66
SH3D19-210ENST00000514152 TLN1Q9Y490 2541 aaKnown RBP4.71□□□□□ -1.66
SH3D19-210ENST00000514152 DNAH10OSP0CZ25 163 aa4.7□□□□□ -1.66
SH3D19-210ENST00000514152 SMR3AQ99954 134 aa4.7□□□□□ -1.66
SH3D19-210ENST00000514152 HTTP42858 3142 aa4.7□□□□□ -1.66
SH3D19-210ENST00000514152 CHD7Q9P2D1 2997 aa4.7□□□□□ -1.66
SH3D19-210ENST00000514152 A0A1B0GVX0 72 aa4.69□□□□□ -1.66
SH3D19-210ENST00000514152 CSAG1Q6PB30 78 aa4.69□□□□□ -1.66
SH3D19-210ENST00000514152 LINC00588Q9Y4M8 146 aa4.68□□□□□ -1.66
SH3D19-210ENST00000514152 MYO9AB2RTY4 2548 aa4.68□□□□□ -1.66
SH3D19-210ENST00000514152 DSCR10P59022 87 aa4.68□□□□□ -1.66
SH3D19-210ENST00000514152 SPRR4Q96PI1 79 aa4.68□□□□□ -1.66
SH3D19-210ENST00000514152 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
SH3D19-210ENST00000514152 C19orf73Q9NVV2 129 aa4.67□□□□□ -1.66
SH3D19-210ENST00000514152 HIVEP3Q5T1R4 2406 aa4.66□□□□□ -1.66
SH3D19-210ENST00000514152 A0A0G2JQZ4 141 aa4.66□□□□□ -1.66
SH3D19-210ENST00000514152 A0A1W2PNN7 141 aa4.66□□□□□ -1.66
SH3D19-210ENST00000514152 Q5VV11 94 aa4.66□□□□□ -1.66
SH3D19-210ENST00000514152 TYMSOSQ8TAI1 123 aa4.66□□□□□ -1.66
SH3D19-210ENST00000514152 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.67
SH3D19-210ENST00000514152 NCOR2Q9Y618 2525 aa4.65□□□□□ -1.67
SH3D19-210ENST00000514152 SPACA4Q8TDM5 124 aa4.64□□□□□ -1.67
SH3D19-210ENST00000514152 A0A0C4DFX4 3053 aa4.64□□□□□ -1.67
SH3D19-210ENST00000514152 LY6G6CO95867 125 aa4.64□□□□□ -1.67
SH3D19-210ENST00000514152 CACNA1AO00555 2505 aa4.63□□□□□ -1.67
SH3D19-210ENST00000514152 CHD9Q3L8U1 2897 aa4.63□□□□□ -1.67
SH3D19-210ENST00000514152 FN1P02751 2386 aaKnown RBP4.62□□□□□ -1.67
SH3D19-210ENST00000514152 Q6ZR54 194 aa4.61□□□□□ -1.67
SH3D19-210ENST00000514152 BRCA2P51587 3418 aa4.61□□□□□ -1.67
SH3D19-210ENST00000514152 SPINK7P58062 85 aa4.6□□□□□ -1.67
SH3D19-210ENST00000514152 CEP295Q9C0D2 2601 aa4.6□□□□□ -1.67
SH3D19-210ENST00000514152 MKI67P46013 3256 aaKnown RBP4.6□□□□□ -1.67
SH3D19-210ENST00000514152 SONP18583 2426 aaKnown RBP4.6□□□□□ -1.67
SH3D19-210ENST00000514152 Q96NJ1 140 aa4.59□□□□□ -1.67
SH3D19-210ENST00000514152 CCDC168Q8NDH2 2452 aa4.59□□□□□ -1.67
SH3D19-210ENST00000514152 Q8NDZ9 215 aa4.59□□□□□ -1.67
SH3D19-210ENST00000514152 RTL8CO15255 209 aa4.59□□□□□ -1.68
SH3D19-210ENST00000514152 CNBPP62633 177 aaKnown RBP4.59□□□□□ -1.68
SH3D19-210ENST00000514152 NBDYA0A0U1RRE5 68 aa4.58□□□□□ -1.68
SH3D19-210ENST00000514152 C9orf163Q8N9P6 203 aa4.58□□□□□ -1.68
SH3D19-210ENST00000514152 USP34Q70CQ2 3546 aa4.57□□□□□ -1.68
SH3D19-210ENST00000514152 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
SH3D19-210ENST00000514152 NOTCH2Q04721 2471 aa4.57□□□□□ -1.68
SH3D19-210ENST00000514152 ANKRD11Q6UB99 2663 aaPredicted RBP4.57□□□□□ -1.68
SH3D19-210ENST00000514152 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
SH3D19-210ENST00000514152 PRRC2CQ9Y520 2896 aaKnown RBP4.56□□□□□ -1.68
SH3D19-210ENST00000514152 USP9XQ93008 2570 aaPredicted RBP4.55□□□□□ -1.68
SH3D19-210ENST00000514152 ZNF861PO60384 105 aa4.55□□□□□ -1.68
SH3D19-210ENST00000514152 MMP24-AS1A0A0U1RRL7 71 aa4.55□□□□□ -1.68
SH3D19-210ENST00000514152 ABCA2Q9BZC7 2435 aa4.55□□□□□ -1.68
SH3D19-210ENST00000514152 HRES1P13985 223 aa4.54□□□□□ -1.68
SH3D19-210ENST00000514152 SPRR1AP35321 89 aa4.53□□□□□ -1.68
SH3D19-210ENST00000514152 CASC10Q5T4H9 136 aa4.52□□□□□ -1.69
SH3D19-210ENST00000514152 TRANK1O15050 2925 aa4.51□□□□□ -1.69
SH3D19-210ENST00000514152 TLN2Q9Y4G6 2542 aa4.51□□□□□ -1.69
SH3D19-210ENST00000514152 MYO18BQ8IUG5 2567 aa4.51□□□□□ -1.69
SH3D19-210ENST00000514152 ZCCHC13Q8WW36 166 aaKnown RBP4.51□□□□□ -1.69
SH3D19-210ENST00000514152 RANBP2P49792 3224 aaKnown RBP4.51□□□□□ -1.69
SH3D19-210ENST00000514152 LAMA3Q16787 3333 aa4.51□□□□□ -1.69
SH3D19-210ENST00000514152 ABCA12Q86UK0 2595 aa4.51□□□□□ -1.69
SH3D19-210ENST00000514152 NOTCH2NLQ7Z3S9 236 aa4.5□□□□□ -1.69
SH3D19-210ENST00000514152 USP9YO00507 2555 aaPredicted RBP4.5□□□□□ -1.69
SH3D19-210ENST00000514152 KRTAP10-3P60369 221 aa4.5□□□□□ -1.69
SH3D19-210ENST00000514152 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
SH3D19-210ENST00000514152 UNC80Q8N2C7 3258 aa4.49□□□□□ -1.69
SH3D19-210ENST00000514152 ROMO1P60602 79 aa4.49□□□□□ -1.69
SH3D19-210ENST00000514152 LINC00472Q9H8W2 130 aa4.49□□□□□ -1.69
SH3D19-210ENST00000514152 KRTAP10-11P60412 298 aa4.48□□□□□ -1.69
SH3D19-210ENST00000514152 ANAPC11Q9NYG5 84 aa4.48□□□□□ -1.69
SH3D19-210ENST00000514152 PKD1L2Q7Z442 2459 aa4.47□□□□□ -1.69
SH3D19-210ENST00000514152 Q8N1X5 172 aa4.47□□□□□ -1.69
SH3D19-210ENST00000514152 PSORS1C2Q9UIG4 136 aa4.47□□□□□ -1.69
SH3D19-210ENST00000514152 SETD2Q9BYW2 2564 aaPredicted RBP4.47□□□□□ -1.69
SH3D19-210ENST00000514152 SPRR1BP22528 89 aa4.46□□□□□ -1.69
SH3D19-210ENST00000514152 CHD8Q9HCK8 2581 aa4.46□□□□□ -1.69
SH3D19-210ENST00000514152 A6NN06 94 aa4.46□□□□□ -1.7
SH3D19-210ENST00000514152 POLQO75417 2590 aa4.46□□□□□ -1.7
SH3D19-210ENST00000514152 LAMA2P24043 3122 aaKnown RBP4.46□□□□□ -1.7
SH3D19-210ENST00000514152 PIEZO1Q92508 2521 aa4.46□□□□□ -1.7
SH3D19-210ENST00000514152 A0A1B0GU33 70 aa4.46□□□□□ -1.7
SH3D19-210ENST00000514152 CDH23Q9H251 3354 aa4.46□□□□□ -1.7
SH3D19-210ENST00000514152 ZNF462Q96JM2 2506 aa4.46□□□□□ -1.7
SH3D19-210ENST00000514152 LCE6AA0A183 80 aa4.45□□□□□ -1.7
SH3D19-210ENST00000514152 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
SH3D19-210ENST00000514152 FLG2Q5D862 2391 aaPredicted RBP4.45□□□□□ -1.7
SH3D19-210ENST00000514152 CR1P17927 2039 aa4.45□□□□□ -1.7
SH3D19-210ENST00000514152 KRTAP24-1Q3LI83 254 aa4.44□□□□□ -1.7
SH3D19-210ENST00000514152 DNAH14Q0VDD8 3507 aa4.44□□□□□ -1.7
SH3D19-210ENST00000514152 ANKRD17O75179 2603 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms