RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 LTN1O94822 1766 aa0.35□□□□□ -2.35
SUB1-208ENST00000511175 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.35□□□□□ -2.352e-6■■□□□ 12.7
SUB1-208ENST00000511175 SMCO4Q9NRQ5 59 aa0.35□□□□□ -2.35
SUB1-208ENST00000511175 LRP1Q07954 4544 aaKnown RBP0.35□□□□□ -2.35
SUB1-208ENST00000511175 PKD1L1Q8TDX9 2849 aa0.35□□□□□ -2.35
SUB1-208ENST00000511175 LRRIQ1Q96JM4 1722 aa0.35□□□□□ -2.35
SUB1-208ENST00000511175 HIVEP3Q5T1R4 2406 aa0.34□□□□□ -2.35
SUB1-208ENST00000511175 LOC730098B7Z3J9 87 aa0.34□□□□□ -2.36
SUB1-208ENST00000511175 PDCD5O14737 125 aa0.34□□□□□ -2.36
SUB1-208ENST00000511175 CNOT1A5YKK6 2376 aaKnown RBP0.34□□□□□ -2.36
SUB1-208ENST00000511175 MAST4O15021 2626 aa0.34□□□□□ -2.36
SUB1-208ENST00000511175 DOT1LQ8TEK3 1739 aa0.33□□□□□ -2.36
SUB1-208ENST00000511175 WNK2Q9Y3S1 2297 aa0.33□□□□□ -2.36
SUB1-208ENST00000511175 C3orf79P0CE67 100 aa0.33□□□□□ -2.36
SUB1-208ENST00000511175 TSC2P49815 1807 aa0.33□□□□□ -2.36
SUB1-208ENST00000511175 PREX1Q8TCU6 1659 aa0.33□□□□□ -2.36
SUB1-208ENST00000511175 RGPD8O14715 1765 aaPredicted RBP0.32□□□□□ -2.36
SUB1-208ENST00000511175 COL14A1Q05707 1796 aaKnown RBP0.32□□□□□ -2.36
SUB1-208ENST00000511175 RGPD5Q99666 1765 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 ANKRD50Q9ULJ7 1429 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 MRPL33O75394 65 aaKnown RBP0.32□□□□□ -2.36
SUB1-208ENST00000511175 KLK9Q2XQG4 91 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 H1FX-AS1Q4G0G2 97 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 LELP1Q5T871 98 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 NSD1Q96L73 2696 aaPredicted RBP0.32□□□□□ -2.36
SUB1-208ENST00000511175 CSPG4Q6UVK1 2322 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 SCN11AQ9UI33 1791 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 ARFGEF2Q9Y6D5 1785 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 FLNAP21333 2647 aaKnown RBP0.32□□□□□ -2.36
SUB1-208ENST00000511175 FAT2Q9NYQ8 4349 aa0.32□□□□□ -2.36
SUB1-208ENST00000511175 SETXQ7Z333 2677 aaKnown RBP0.31□□□□□ -2.36
SUB1-208ENST00000511175 IQGAP3Q86VI3 1631 aa0.31□□□□□ -2.36
SUB1-208ENST00000511175 CELSR1Q9NYQ6 3014 aa0.31□□□□□ -2.36
SUB1-208ENST00000511175 NREPQ16612 68 aa0.31□□□□□ -2.36
SUB1-208ENST00000511175 UGGT2Q9NYU1 1516 aa0.31□□□□□ -2.36
SUB1-208ENST00000511175 TNXBP22105 4242 aa0.31□□□□□ -2.36
SUB1-208ENST00000511175 TRANK1O15050 2925 aa0.31□□□□□ -2.36
SUB1-208ENST00000511175 NWD1Q149M9 1564 aa0.3□□□□□ -2.36
SUB1-208ENST00000511175 MAP1BP46821 2468 aaKnown RBP0.3□□□□□ -2.36
SUB1-208ENST00000511175 KMT2DO14686 5537 aa0.3□□□□□ -2.36
SUB1-208ENST00000511175 MYO5CQ9NQX4 1742 aa0.3□□□□□ -2.36
SUB1-208ENST00000511175 BCORQ6W2J9 1755 aa0.29□□□□□ -2.36
SUB1-208ENST00000511175 HUWE1Q7Z6Z7 4374 aaKnown RBP0.29□□□□□ -2.36
SUB1-208ENST00000511175 NDUFA4O00483 81 aa0.29□□□□□ -2.36
SUB1-208ENST00000511175 DEFA5Q01523 94 aa0.29□□□□□ -2.36
SUB1-208ENST00000511175 WFDC13Q8IUB5 93 aa0.29□□□□□ -2.36
SUB1-208ENST00000511175 PRO3102Q9H379 93 aa0.29□□□□□ -2.36
SUB1-208ENST00000511175 EP300Q09472 2414 aaPredicted RBP0.29□□□□□ -2.36
SUB1-208ENST00000511175 TIAM2Q8IVF5 1701 aa0.29□□□□□ -2.36
SUB1-208ENST00000511175 CACNA1AO00555 2505 aa0.28□□□□□ -2.36
SUB1-208ENST00000511175 FLNCQ14315 2725 aa0.28□□□□□ -2.36
SUB1-208ENST00000511175 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
SUB1-208ENST00000511175 H3BVH4 76 aa0.28□□□□□ -2.36
SUB1-208ENST00000511175 UBL5Q9BZL1 73 aa0.28□□□□□ -2.36
SUB1-208ENST00000511175 BSNQ9UPA5 3926 aa0.28□□□□□ -2.36
SUB1-208ENST00000511175 PRKDCP78527 4128 aaKnown RBP0.28□□□□□ -2.36
SUB1-208ENST00000511175 DNMBPQ6XZF7 1577 aa0.28□□□□□ -2.37
SUB1-208ENST00000511175 DCHS2Q6V1P9 2916 aa0.27□□□□□ -2.37
SUB1-208ENST00000511175 EIF2AK4Q9P2K8 1649 aaKnown RBP0.27□□□□□ -2.37
SUB1-208ENST00000511175 CFAP43Q8NDM7 1665 aa0.27□□□□□ -2.37
SUB1-208ENST00000511175 WNK1Q9H4A3 2382 aa0.27□□□□□ -2.37
SUB1-208ENST00000511175 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
SUB1-208ENST00000511175 M0R2T5 61 aa0.27□□□□□ -2.37
SUB1-208ENST00000511175 NDUFA3O95167 84 aa0.27□□□□□ -2.37
SUB1-208ENST00000511175 ATXN8Q156A1 80 aa0.27□□□□□ -2.37
SUB1-208ENST00000511175 RALGAPBQ86X10 1494 aa0.27□□□□□ -2.37
SUB1-208ENST00000511175 DUOX2Q9NRD8 1548 aa0.27□□□□□ -2.37
SUB1-208ENST00000511175 APC2O95996 2303 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 COL7A1Q02388 2944 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 DEFB131BA0A096LNP1 70 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 H0YGG7 62 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 LINC00158P58513 81 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 GNG13Q9P2W3 67 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 HFM1A2PYH4 1435 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 NESP48681 1621 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 TNRC6CQ9HCJ0 1690 aaKnown RBP0.26□□□□□ -2.37
SUB1-208ENST00000511175 PDE4DIPQ5VU43 2346 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 KMT2AQ03164 3969 aa0.26□□□□□ -2.37
SUB1-208ENST00000511175 KNL1Q8NG31 2342 aa0.25□□□□□ -2.37
SUB1-208ENST00000511175 CDC42BPGQ6DT37 1551 aa0.25□□□□□ -2.37
SUB1-208ENST00000511175 LMTK2Q8IWU2 1503 aa0.25□□□□□ -2.37
SUB1-208ENST00000511175 PRM1P04553 51 aa0.25□□□□□ -2.37
SUB1-208ENST00000511175 HECTD1Q9ULT8 2610 aa0.25□□□□□ -2.37
SUB1-208ENST00000511175 DIP2AQ14689 1571 aa0.24□□□□□ -2.37
SUB1-208ENST00000511175 ASXL1Q8IXJ9 1541 aa0.24□□□□□ -2.37
SUB1-208ENST00000511175 DEFB135Q30KP9 77 aa0.24□□□□□ -2.37
SUB1-208ENST00000511175 RICTORQ6R327 1708 aa0.24□□□□□ -2.37
SUB1-208ENST00000511175 ADAMTS12P58397 1594 aa0.23□□□□□ -2.37
SUB1-208ENST00000511175 THOC2Q8NI27 1593 aaKnown RBP0.23□□□□□ -2.37
SUB1-208ENST00000511175 KCNQ1DNQ9H478 68 aa0.23□□□□□ -2.37
SUB1-208ENST00000511175 PARP4Q9UKK3 1724 aaKnown RBP0.23□□□□□ -2.37
SUB1-208ENST00000511175 WIZO95785 1651 aa0.23□□□□□ -2.37
SUB1-208ENST00000511175 PLCH1Q4KWH8 1693 aa0.23□□□□□ -2.37
SUB1-208ENST00000511175 CICQ96RK0 1608 aaPredicted RBP0.23□□□□□ -2.37
SUB1-208ENST00000511175 ACANP16112 2415 aa0.23□□□□□ -2.37
SUB1-208ENST00000511175 LPAP08519 4548 aa0.23□□□□□ -2.37
SUB1-208ENST00000511175 FLNBO75369 2602 aaKnown RBP0.22□□□□□ -2.37
SUB1-208ENST00000511175 AKAP13Q12802 2813 aa0.22□□□□□ -2.37
SUB1-208ENST00000511175 ENHOQ6UWT2 76 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms