RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 KCNQ1DNQ9H478 68 aa2.56□□□□□ -2
SPARCL1-206ENST00000509407 MYO15AQ9UKN7 3530 aa2.56□□□□□ -2
SPARCL1-206ENST00000509407 SEC16AO15027 2179 aa2.56□□□□□ -2
SPARCL1-206ENST00000509407 GOLGA4Q13439 2230 aaKnown RBP2.56□□□□□ -2
SPARCL1-206ENST00000509407 FAM208BQ5VWN6 2430 aa2.56□□□□□ -2
SPARCL1-206ENST00000509407 NCOR2Q9Y618 2525 aa2.56□□□□□ -2
SPARCL1-206ENST00000509407 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
SPARCL1-206ENST00000509407 Q6ZQY7 126 aa2.55□□□□□ -2
SPARCL1-206ENST00000509407 CEP295Q9C0D2 2601 aa2.55□□□□□ -2
SPARCL1-206ENST00000509407 ACACAQ13085 2346 aa2.54□□□□□ -2
SPARCL1-206ENST00000509407 ALPK2Q86TB3 2170 aa2.54□□□□□ -2
SPARCL1-206ENST00000509407 CHD8Q9HCK8 2581 aa2.54□□□□□ -2
SPARCL1-206ENST00000509407 IGKV2-28A0A075B6P5 120 aa2.54□□□□□ -2
SPARCL1-206ENST00000509407 J3QKU1 62 aa2.54□□□□□ -2
SPARCL1-206ENST00000509407 NDUFA3O95167 84 aa2.54□□□□□ -2
SPARCL1-206ENST00000509407 IGKV2D-28P01615 120 aa2.54□□□□□ -2
SPARCL1-206ENST00000509407 LAMA1P25391 3075 aa2.54□□□□□ -2
SPARCL1-206ENST00000509407 MAP1BP46821 2468 aaKnown RBP2.53□□□□□ -2
SPARCL1-206ENST00000509407 EPG5Q9HCE0 2579 aa2.53□□□□□ -2
SPARCL1-206ENST00000509407 KRTAP12-2P59991 146 aa2.53□□□□□ -2
SPARCL1-206ENST00000509407 TMEM167BQ9NRX6 74 aa2.53□□□□□ -2
SPARCL1-206ENST00000509407 URB1O60287 2271 aaKnown RBP2.53□□□□□ -2
SPARCL1-206ENST00000509407 ANKRD11Q6UB99 2663 aaPredicted RBP2.53□□□□□ -2.01
SPARCL1-206ENST00000509407 DMDP11532 3685 aa2.53□□□□□ -2.01
SPARCL1-206ENST00000509407 KNTC1P50748 2209 aa2.52□□□□□ -2.01
SPARCL1-206ENST00000509407 IGKV2-24A0A0C4DH68 120 aa2.52□□□□□ -2.01
SPARCL1-206ENST00000509407 MRPL33O75394 65 aaKnown RBP2.52□□□□□ -2.01
SPARCL1-206ENST00000509407 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.52□□□□□ -2.01
SPARCL1-206ENST00000509407 CCL19Q99731 98 aa2.52□□□□□ -2.01
SPARCL1-206ENST00000509407 CACNA1GO43497 2377 aa2.52□□□□□ -2.01
SPARCL1-206ENST00000509407 IGF2RP11717 2491 aa2.51□□□□□ -2.01
SPARCL1-206ENST00000509407 KNL1Q8NG31 2342 aa2.51□□□□□ -2.01
SPARCL1-206ENST00000509407 DEFB109BQ30KR1 87 aa2.51□□□□□ -2.01
SPARCL1-206ENST00000509407 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
SPARCL1-206ENST00000509407 PRR9Q5T870 116 aa2.5□□□□□ -2.01
SPARCL1-206ENST00000509407 SMIM11BQ8TCY0 68 aa2.5□□□□□ -2.01
SPARCL1-206ENST00000509407 COX14Q96I36 57 aa2.5□□□□□ -2.01
SPARCL1-206ENST00000509407 ANAPC11Q9NYG5 84 aa2.5□□□□□ -2.01
SPARCL1-206ENST00000509407 DCHS1Q96JQ0 3298 aa2.5□□□□□ -2.01
SPARCL1-206ENST00000509407 APC2O95996 2303 aa2.5□□□□□ -2.01
SPARCL1-206ENST00000509407 KMT2BQ9UMN6 2715 aaPredicted RBP2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 TNCP24821 2201 aa2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 USP24Q9UPU5 2620 aa2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 PRRC2AP48634 2157 aaKnown RBP2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 CPSF4LA6NMK7 179 aaKnown RBP2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 KRTAP13-2Q52LG2 175 aa2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 C10orf99Q6UWK7 81 aa2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 Q6ZRX8 168 aa2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 ATRXP46100 2492 aa2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 PKD1L2Q7Z442 2459 aa2.49□□□□□ -2.01
SPARCL1-206ENST00000509407 DNAH14Q0VDD8 3507 aa2.48□□□□□ -2.01
SPARCL1-206ENST00000509407 PIN1P1O15428 100 aa2.48□□□□□ -2.01
SPARCL1-206ENST00000509407 PRB1P04280 392 aa2.48□□□□□ -2.01
SPARCL1-206ENST00000509407 SSBP3-AS1Q7Z2R9 100 aa2.48□□□□□ -2.01
SPARCL1-206ENST00000509407 U3KQA8 63 aa2.48□□□□□ -2.01
SPARCL1-206ENST00000509407 DSPP15924 2871 aaKnown RBP2.48□□□□□ -2.01
SPARCL1-206ENST00000509407 SPTA1P02549 2419 aa2.48□□□□□ -2.01
SPARCL1-206ENST00000509407 RTTNQ86VV8 2226 aa2.48□□□□□ -2.01
SPARCL1-206ENST00000509407 FRYQ5TBA9 3013 aa2.47□□□□□ -2.01
SPARCL1-206ENST00000509407 CHD6Q8TD26 2715 aa2.47□□□□□ -2.01
SPARCL1-206ENST00000509407 AKAP13Q12802 2813 aa2.46□□□□□ -2.01
SPARCL1-206ENST00000509407 FREM1Q5H8C1 2179 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 BPTFQ12830 3046 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 DEFB131BA0A096LNP1 70 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 CCL22O00626 93 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 LY6G6CO95867 125 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 DEFB110Q30KQ9 67 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 ASXL3Q9C0F0 2248 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 FREM2Q5SZK8 3169 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 DMXL2Q8TDJ6 3036 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 PTPRQQ9UMZ3 2332 aa2.46□□□□□ -2.02
SPARCL1-206ENST00000509407 COL6A6A6NMZ7 2263 aa2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 AHCTF1Q8WYP5 2266 aa2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 BAHCC1Q9P281 2608 aa2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 GVQW2A0A096LPI5 108 aaPredicted RBP2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 G3V318 75 aa2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 KRTAP10-8P60410 259 aa2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 Q6ZRN7 208 aaPredicted RBP2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 ZFYVE26Q68DK2 2539 aa2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 CFAP47Q6ZTR5 3102 aa2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 RP1L1Q8IWN7 2480 aaPredicted RBP2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 NBEAQ8NFP9 2946 aa2.45□□□□□ -2.02
SPARCL1-206ENST00000509407 A0A096LNT2 108 aa2.44□□□□□ -2.02
SPARCL1-206ENST00000509407 H0YGG7 62 aa2.44□□□□□ -2.02
SPARCL1-206ENST00000509407 PRB2P02812 416 aaPredicted RBP2.44□□□□□ -2.02
SPARCL1-206ENST00000509407 ITPR1Q14643 2758 aa2.44□□□□□ -2.02
SPARCL1-206ENST00000509407 MED13LQ71F56 2210 aa2.44□□□□□ -2.02
SPARCL1-206ENST00000509407 PIEZO2Q9H5I5 2752 aa2.44□□□□□ -2.02
SPARCL1-206ENST00000509407 FASNP49327 2511 aaKnown RBP2.43□□□□□ -2.02
SPARCL1-206ENST00000509407 IGSF10Q6WRI0 2623 aa2.43□□□□□ -2.02
SPARCL1-206ENST00000509407 MYO18BQ8IUG5 2567 aa2.43□□□□□ -2.02
SPARCL1-206ENST00000509407 ZZEF1O43149 2961 aa2.43□□□□□ -2.02
SPARCL1-206ENST00000509407 ZNF462Q96JM2 2506 aa2.43□□□□□ -2.02
SPARCL1-206ENST00000509407 GCN1Q92616 2671 aaKnown RBP2.43□□□□□ -2.02
SPARCL1-206ENST00000509407 CACNA1CQ13936 2221 aa2.42□□□□□ -2.02
SPARCL1-206ENST00000509407 KALRNO60229 2985 aa2.42□□□□□ -2.02
SPARCL1-206ENST00000509407 ASPMQ8IZT6 3477 aa2.42□□□□□ -2.02
SPARCL1-206ENST00000509407 SPEGQ15772 3267 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms